RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 M0R381 172 aa10.23□□□□□ -0.77
LMBR1-220ENST00000609081 LINC00694P0DN24 101 aa10.23□□□□□ -0.77
LMBR1-220ENST00000609081 CCL20P78556 96 aa10.23□□□□□ -0.77
LMBR1-220ENST00000609081 MEF2BQ02080 365 aaPredicted RBP10.23□□□□□ -0.77
LMBR1-220ENST00000609081 TRBV10-1A0A0K0K1A3 114 aa10.22□□□□□ -0.77
LMBR1-220ENST00000609081 CDK2AP2O75956 126 aa10.22□□□□□ -0.77
LMBR1-220ENST00000609081 OR5AL1P0C617 328 aa10.22□□□□□ -0.77
LMBR1-220ENST00000609081 FAM74A4Q5TZK3 123 aa10.22□□□□□ -0.77
LMBR1-220ENST00000609081 Q6ZSN1 163 aa10.22□□□□□ -0.77
LMBR1-220ENST00000609081 SSBP4Q9BWG4 385 aaPredicted RBP10.22□□□□□ -0.77
LMBR1-220ENST00000609081 SAMD10Q9BYL1 202 aa10.22□□□□□ -0.77
LMBR1-220ENST00000609081 JPT2Q9H910 190 aa10.22□□□□□ -0.77
LMBR1-220ENST00000609081 BIN3Q9NQY0 253 aa10.22□□□□□ -0.77
LMBR1-220ENST00000609081 PGPEP1Q9NXJ5 209 aa10.22□□□□□ -0.77
LMBR1-220ENST00000609081 SNAI2O43623 268 aa10.21□□□□□ -0.77
LMBR1-220ENST00000609081 LAGE3Q14657 143 aa10.21□□□□□ -0.77
LMBR1-220ENST00000609081 CDPF1Q6NVV7 123 aa10.21□□□□□ -0.77
LMBR1-220ENST00000609081 GAGE12JA6NER3 117 aa10.2□□□□□ -0.78
LMBR1-220ENST00000609081 IBA57-AS1B1ANH7 110 aa10.2□□□□□ -0.78
LMBR1-220ENST00000609081 BCL2P10415 239 aa10.2□□□□□ -0.78
LMBR1-220ENST00000609081 GAGE1Q13065 139 aa10.2□□□□□ -0.78
LMBR1-220ENST00000609081 GAGE4Q13068 117 aa10.2□□□□□ -0.78
LMBR1-220ENST00000609081 GAGE5Q13069 117 aa10.2□□□□□ -0.78
LMBR1-220ENST00000609081 GAGE13Q4V321 117 aa10.2□□□□□ -0.78
LMBR1-220ENST00000609081 CENPWQ5EE01 88 aa10.2□□□□□ -0.78
LMBR1-220ENST00000609081 PRR27Q6MZM9 219 aa10.2□□□□□ -0.78
LMBR1-220ENST00000609081 VAX2Q9UIW0 290 aa10.2□□□□□ -0.78
LMBR1-220ENST00000609081 A0A087WWL8 130 aa10.19□□□□□ -0.78
LMBR1-220ENST00000609081 GNG4P50150 75 aa10.19□□□□□ -0.78
LMBR1-220ENST00000609081 RPS20P60866 119 aaKnown RBP10.19□□□□□ -0.78
LMBR1-220ENST00000609081 RAB4BP61018 213 aa10.19□□□□□ -0.78
LMBR1-220ENST00000609081 RPL36AP83881 106 aaKnown RBP10.19□□□□□ -0.78
LMBR1-220ENST00000609081 RPL19P84098 196 aaKnown RBP10.19□□□□□ -0.78
LMBR1-220ENST00000609081 SPANXN1Q5VSR9 72 aa10.19□□□□□ -0.78
LMBR1-220ENST00000609081 C9orf62Q8N4C0 152 aa10.19□□□□□ -0.78
LMBR1-220ENST00000609081 C14orf178Q8N769 122 aaPredicted RBP10.19□□□□□ -0.78
LMBR1-220ENST00000609081 RPL36ALQ969Q0 106 aaKnown RBP10.19□□□□□ -0.78
LMBR1-220ENST00000609081 DAZAP1Q96EP5 407 aaKnown RBP10.19□□□□□ -0.78
LMBR1-220ENST00000609081 DERL1Q9BUN8 251 aa10.19□□□□□ -0.78
LMBR1-220ENST00000609081 TNFRSF18Q9Y5U5 241 aa10.19□□□□□ -0.78
LMBR1-220ENST00000609081 XKRY2A2RUG3 117 aa10.18□□□□□ -0.78
LMBR1-220ENST00000609081 TOR2AQ5JU69 321 aa10.18□□□□□ -0.78
LMBR1-220ENST00000609081 OR10AG1Q8NH19 301 aa10.18□□□□□ -0.78
LMBR1-220ENST00000609081 MED9Q9NWA0 146 aa10.18□□□□□ -0.78
LMBR1-220ENST00000609081 A0A087WTM6 91 aa10.17□□□□□ -0.78
LMBR1-220ENST00000609081 PSCAO43653 123 aa10.17□□□□□ -0.78
LMBR1-220ENST00000609081 KRTAP10-2P60368 255 aa10.17□□□□□ -0.78
LMBR1-220ENST00000609081 BLOC1S1P78537 153 aa10.17□□□□□ -0.78
LMBR1-220ENST00000609081 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.17□□□□□ -0.78
LMBR1-220ENST00000609081 TRBV7-3A0A075B6L6 115 aa10.16□□□□□ -0.78
LMBR1-220ENST00000609081 OR10G8Q8NGN5 311 aa10.16□□□□□ -0.78
LMBR1-220ENST00000609081 AP1S3Q96PC3 154 aa10.16□□□□□ -0.78
LMBR1-220ENST00000609081 TM2D2Q9BX73 214 aa10.16□□□□□ -0.78
LMBR1-220ENST00000609081 TRAV8-3A0A0A6YYJ7 113 aa10.15□□□□□ -0.78
LMBR1-220ENST00000609081 C19orf71A6NCJ1 209 aa10.15□□□□□ -0.78
LMBR1-220ENST00000609081 IGLV2-8P01709 118 aa10.15□□□□□ -0.78
LMBR1-220ENST00000609081 IGHV3-30P01768 117 aa10.15□□□□□ -0.78
LMBR1-220ENST00000609081 IGHV3-33P01772 117 aa10.15□□□□□ -0.78
LMBR1-220ENST00000609081 SMIM17P0DL12 118 aa10.15□□□□□ -0.78
LMBR1-220ENST00000609081 IGHV3-30-3P0DP02 117 aa10.15□□□□□ -0.78
LMBR1-220ENST00000609081 IGHV3-30-5P0DP03 117 aa10.15□□□□□ -0.78
LMBR1-220ENST00000609081 ZNF56Q15929 161 aa10.15□□□□□ -0.78
LMBR1-220ENST00000609081 OR2D3Q8NGH3 330 aa10.15□□□□□ -0.78
LMBR1-220ENST00000609081 CHCHD7Q9BUK0 85 aa10.15□□□□□ -0.78
LMBR1-220ENST00000609081 URGCP-MRPS24S4R325 110 aa10.15□□□□□ -0.78
LMBR1-220ENST00000609081 LRP1BQ9NZR2 4599 aa10.14□□□□□ -0.79
LMBR1-220ENST00000609081 hCG_2014768A0A024R1R8 64 aa10.14□□□□□ -0.79
LMBR1-220ENST00000609081 RAB19A4D1S5 217 aa10.14□□□□□ -0.79
LMBR1-220ENST00000609081 F2Z2F3 143 aa10.14□□□□□ -0.79
LMBR1-220ENST00000609081 P01737 135 aa10.14□□□□□ -0.79
LMBR1-220ENST00000609081 UBE2D3P61077 147 aa10.14□□□□□ -0.79
LMBR1-220ENST00000609081 UBE2D2P62837 147 aa10.14□□□□□ -0.79
LMBR1-220ENST00000609081 CACNG7P62955 275 aa10.14□□□□□ -0.79
LMBR1-220ENST00000609081 FER1L6-AS1Q8NA97 138 aa10.14□□□□□ -0.79
LMBR1-220ENST00000609081 Q9UF83 564 aa10.14□□□□□ -0.79
LMBR1-220ENST00000609081 IGLC6P0CF74 106 aa10.13□□□□□ -0.79
LMBR1-220ENST00000609081 COX11Q9Y6N1 276 aa10.13□□□□□ -0.79
LMBR1-220ENST00000609081 TRBV20OR9-2A0A075B6H5 130 aa10.12□□□□□ -0.79
LMBR1-220ENST00000609081 TMEM250H0YL14 139 aa10.12□□□□□ -0.79
LMBR1-220ENST00000609081 ELOBQ15370 118 aa10.12□□□□□ -0.79
LMBR1-220ENST00000609081 TMEM97Q5BJF2 176 aa10.12□□□□□ -0.79
LMBR1-220ENST00000609081 KCNIP4Q6PIL6 250 aa10.12□□□□□ -0.79
LMBR1-220ENST00000609081 NIT1Q86X76 327 aa10.12□□□□□ -0.79
LMBR1-220ENST00000609081 LYPD6BQ8NI32 183 aa10.12□□□□□ -0.79
LMBR1-220ENST00000609081 NTN5Q8WTR8 489 aaPredicted RBP10.12□□□□□ -0.79
LMBR1-220ENST00000609081 Q9HAA7 133 aa10.12□□□□□ -0.79
LMBR1-220ENST00000609081 RYR1P21817 5038 aa10.11□□□□□ -0.79
LMBR1-220ENST00000609081 F5H697 171 aa10.11□□□□□ -0.79
LMBR1-220ENST00000609081 H7C1H1 209 aa10.11□□□□□ -0.79
LMBR1-220ENST00000609081 NDUFS6O75380 124 aaKnown RBP10.11□□□□□ -0.79
LMBR1-220ENST00000609081 PKIAP61925 76 aa10.11□□□□□ -0.79
LMBR1-220ENST00000609081 WDR73Q6P4I2 378 aa10.11□□□□□ -0.79
LMBR1-220ENST00000609081 ALKAL2Q6UX46 152 aa10.11□□□□□ -0.79
LMBR1-220ENST00000609081 NEXN-AS1Q8NBZ9 246 aa10.11□□□□□ -0.79
LMBR1-220ENST00000609081 RMI2Q96E14 147 aa10.11□□□□□ -0.79
LMBR1-220ENST00000609081 A0A087WX48 190 aa10.1□□□□□ -0.79
LMBR1-220ENST00000609081 LRCOL1A6NCL2 159 aa10.1□□□□□ -0.79
LMBR1-220ENST00000609081 RBFOX3A6NFN3 312 aa10.1□□□□□ -0.79
LMBR1-220ENST00000609081 TRGC1P0CF51 173 aa10.1□□□□□ -0.79
LMBR1-220ENST00000609081 DAZ4Q86SG3 579 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 1246.5 ms