RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 Q6Q795 121 aa9.37□□□□□ -0.91
CDCA3-212ENST00000604599 DEFB123Q8N688 67 aa9.37□□□□□ -0.91
CDCA3-212ENST00000604599 UBE2WQ96B02 151 aa9.37□□□□□ -0.91
CDCA3-212ENST00000604599 G3V318 75 aa9.37□□□□□ -0.91
CDCA3-212ENST00000604599 P0DMU3 169 aa9.37□□□□□ -0.91
CDCA3-212ENST00000604599 FAM231AP0DMU4 169 aa9.37□□□□□ -0.91
CDCA3-212ENST00000604599 FAM231CP0DMU5 169 aa9.37□□□□□ -0.91
CDCA3-212ENST00000604599 RNASE4P34096 147 aaKnown RBP9.37□□□□□ -0.91
CDCA3-212ENST00000604599 LY6G5BQ8NDX9 201 aa9.37□□□□□ -0.91
CDCA3-212ENST00000604599 ANKHD1Q8IWZ3 2542 aaKnown RBP9.36□□□□□ -0.91
CDCA3-212ENST00000604599 A0A0B4J2C4 111 aa9.36□□□□□ -0.91
CDCA3-212ENST00000604599 ODF3BA8MYP8 253 aa9.36□□□□□ -0.91
CDCA3-212ENST00000604599 ATP6V0E1O15342 81 aa9.36□□□□□ -0.91
CDCA3-212ENST00000604599 TRIAP1O43715 76 aa9.36□□□□□ -0.91
CDCA3-212ENST00000604599 ZNF876PQ49A33 203 aa9.36□□□□□ -0.91
CDCA3-212ENST00000604599 A0A087WWL8 130 aa9.36□□□□□ -0.91
CDCA3-212ENST00000604599 F5H697 171 aa9.36□□□□□ -0.91
CDCA3-212ENST00000604599 RNASE3P12724 160 aaKnown RBP9.36□□□□□ -0.91
CDCA3-212ENST00000604599 VMO1Q7Z5L0 202 aa9.36□□□□□ -0.91
CDCA3-212ENST00000604599 OR10J6PQ8NGY7 276 aa9.36□□□□□ -0.91
CDCA3-212ENST00000604599 ZNF580Q9UK33 172 aa9.36□□□□□ -0.91
CDCA3-212ENST00000604599 B9A039 149 aa9.35□□□□□ -0.91
CDCA3-212ENST00000604599 F6UB75 175 aa9.35□□□□□ -0.91
CDCA3-212ENST00000604599 BRI3O95415 125 aa9.35□□□□□ -0.91
CDCA3-212ENST00000604599 PPP1R17O96001 155 aa9.35□□□□□ -0.91
CDCA3-212ENST00000604599 Q8N6K4 173 aa9.35□□□□□ -0.91
CDCA3-212ENST00000604599 TRBV10-2A0A0K0K1G8 114 aa9.35□□□□□ -0.91
CDCA3-212ENST00000604599 RPL13AP40429 203 aaKnown RBP9.35□□□□□ -0.91
CDCA3-212ENST00000604599 FOXC1Q12948 553 aa9.35□□□□□ -0.91
CDCA3-212ENST00000604599 C2orf82Q6UX34 121 aa9.35□□□□□ -0.91
CDCA3-212ENST00000604599 Q8N9W7 124 aa9.35□□□□□ -0.91
CDCA3-212ENST00000604599 FAM110DQ8TAY7 271 aaPredicted RBP9.35□□□□□ -0.91
CDCA3-212ENST00000604599 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.35□□□□□ -0.91
CDCA3-212ENST00000604599 ADARB2-AS1A8MUL3 147 aa9.35□□□□□ -0.91
CDCA3-212ENST00000604599 LGALS9O00182 355 aa9.35□□□□□ -0.91
CDCA3-212ENST00000604599 TMEM141Q96I45 108 aa9.35□□□□□ -0.91
CDCA3-212ENST00000604599 TIMM17AQ99595 171 aa9.35□□□□□ -0.91
CDCA3-212ENST00000604599 CHCHD5Q9BSY4 110 aa9.35□□□□□ -0.91
CDCA3-212ENST00000604599 ZNF256Q9Y2P7 627 aaPredicted RBP9.35□□□□□ -0.91
CDCA3-212ENST00000604599 BSNQ9UPA5 3926 aa9.34□□□□□ -0.91
CDCA3-212ENST00000604599 IGKV3-7A0A075B6H7 116 aa9.34□□□□□ -0.91
CDCA3-212ENST00000604599 SDHAF1A6NFY7 115 aa9.34□□□□□ -0.91
CDCA3-212ENST00000604599 ZNF56Q15929 161 aa9.34□□□□□ -0.91
CDCA3-212ENST00000604599 SUMO4Q6EEV6 95 aa9.34□□□□□ -0.91
CDCA3-212ENST00000604599 POLR2KP53803 58 aaKnown RBP9.34□□□□□ -0.91
CDCA3-212ENST00000604599 LINC00315P59091 139 aa9.34□□□□□ -0.91
CDCA3-212ENST00000604599 IGFL3Q6UXB1 125 aa9.34□□□□□ -0.91
CDCA3-212ENST00000604599 DEFB124Q8NES8 71 aa9.33□□□□□ -0.92
CDCA3-212ENST00000604599 ITLN2Q8WWU7 325 aaPredicted RBP9.33□□□□□ -0.92
CDCA3-212ENST00000604599 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.33□□□□□ -0.92
CDCA3-212ENST00000604599 FAM74A4Q5TZK3 123 aa9.33□□□□□ -0.92
CDCA3-212ENST00000604599 C9orf139Q6ZV77 190 aa9.33□□□□□ -0.92
CDCA3-212ENST00000604599 DUX3Q96PT4 197 aa9.33□□□□□ -0.92
CDCA3-212ENST00000604599 LENEPQ9Y5L5 61 aa9.33□□□□□ -0.92
CDCA3-212ENST00000604599 PRRC2AP48634 2157 aaKnown RBP9.32□□□□□ -0.92
CDCA3-212ENST00000604599 TMEM223A0PJW6 202 aa9.32□□□□□ -0.92
CDCA3-212ENST00000604599 VCYO14598 125 aa9.32□□□□□ -0.92
CDCA3-212ENST00000604599 LEPROTO15243 131 aa9.32□□□□□ -0.92
CDCA3-212ENST00000604599 CD3EP07766 207 aa9.32□□□□□ -0.92
CDCA3-212ENST00000604599 LINC00477Q96M19 166 aa9.32□□□□□ -0.92
CDCA3-212ENST00000604599 KIF25-AS1Q9Y6Z4 181 aa9.32□□□□□ -0.92
CDCA3-212ENST00000604599 PRSS2P07478 247 aa9.32□□□□□ -0.92
CDCA3-212ENST00000604599 Q6ZSV7 163 aa9.32□□□□□ -0.92
CDCA3-212ENST00000604599 EEF1AKMT3Q96AZ1 226 aa9.32□□□□□ -0.92
CDCA3-212ENST00000604599 H7C423 109 aa9.32□□□□□ -0.92
CDCA3-212ENST00000604599 RPL11P62913 178 aaKnown RBP9.32□□□□□ -0.92
CDCA3-212ENST00000604599 PRR30Q53SZ7 412 aaPredicted RBP9.32□□□□□ -0.92
CDCA3-212ENST00000604599 MDFICQ9P1T7 246 aa9.32□□□□□ -0.92
CDCA3-212ENST00000604599 AKAP13Q12802 2813 aa9.31□□□□□ -0.92
CDCA3-212ENST00000604599 IGHV4OR15-8A0A075B7B6 117 aa9.31□□□□□ -0.92
CDCA3-212ENST00000604599 A0A087WW49 117 aa9.31□□□□□ -0.92
CDCA3-212ENST00000604599 ZNF22P17026 224 aaPredicted RBP9.31□□□□□ -0.92
CDCA3-212ENST00000604599 NPC2P61916 151 aa9.31□□□□□ -0.92
CDCA3-212ENST00000604599 CLEC2BQ92478 149 aa9.31□□□□□ -0.92
CDCA3-212ENST00000604599 U3KQE9 123 aa9.31□□□□□ -0.92
CDCA3-212ENST00000604599 TRBV30A0A0K0K1B3 111 aa9.31□□□□□ -0.92
CDCA3-212ENST00000604599 A0A0J9YXV3 536 aa9.3□□□□□ -0.92
CDCA3-212ENST00000604599 A0A0J9YXY3 114 aa9.3□□□□□ -0.92
CDCA3-212ENST00000604599 M0R1W7 72 aa9.3□□□□□ -0.92
CDCA3-212ENST00000604599 M0R2P5 195 aa9.3□□□□□ -0.92
CDCA3-212ENST00000604599 UBE2E1P51965 193 aa9.3□□□□□ -0.92
CDCA3-212ENST00000604599 LINC01560Q8TB33 94 aa9.3□□□□□ -0.92
CDCA3-212ENST00000604599 MED14OSP0DP75 135 aa9.3□□□□□ -0.92
CDCA3-212ENST00000604599 EBI3Q14213 229 aa9.3□□□□□ -0.92
CDCA3-212ENST00000604599 LINC00527Q9UJ94 153 aa9.3□□□□□ -0.92
CDCA3-212ENST00000604599 TNFRSF18Q9Y5U5 241 aa9.3□□□□□ -0.92
CDCA3-212ENST00000604599 ICOSQ9Y6W8 199 aa9.3□□□□□ -0.92
CDCA3-212ENST00000604599 NBASA2RRP1 2371 aa9.3□□□□□ -0.92
CDCA3-212ENST00000604599 UNQ9165/PRO28630Q6UXU0 137 aa9.29□□□□□ -0.92
CDCA3-212ENST00000604599 POM121L12Q8N7R1 296 aa9.29□□□□□ -0.92
CDCA3-212ENST00000604599 PTPRZ1P23471 2315 aaPredicted RBP9.29□□□□□ -0.92
CDCA3-212ENST00000604599 ZFHX3Q15911 3703 aa9.29□□□□□ -0.92
CDCA3-212ENST00000604599 PPDPFQ9H3Y8 114 aa9.28□□□□□ -0.92
CDCA3-212ENST00000604599 OTOGLQ3ZCN5 2332 aa9.28□□□□□ -0.92
CDCA3-212ENST00000604599 TRBV27A0A0K0K1C4 114 aa9.28□□□□□ -0.92
CDCA3-212ENST00000604599 OVOL1O14753 267 aa9.28□□□□□ -0.92
CDCA3-212ENST00000604599 SPXQ9BT56 116 aa9.28□□□□□ -0.92
CDCA3-212ENST00000604599 TRBV7-1A0A0A6YYK4 115 aa9.28□□□□□ -0.92
CDCA3-212ENST00000604599 NXPH4O95158 308 aa9.28□□□□□ -0.92
CDCA3-212ENST00000604599 TMEM95Q3KNT9 176 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms