RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 RFPL3SP0C7P2 107 aa6.55□□□□□ -1.36
COMMD3-215ENST00000602574 MIFP14174 115 aa6.55□□□□□ -1.36
COMMD3-215ENST00000602574 LINC00846Q9NV44 126 aa6.55□□□□□ -1.36
COMMD3-215ENST00000602574 IGKV1D-17A0A075B6S4 117 aa6.54□□□□□ -1.36
COMMD3-215ENST00000602574 BPESC1Q9GZL8 116 aa6.54□□□□□ -1.36
COMMD3-215ENST00000602574 POLEQ07864 2286 aa6.54□□□□□ -1.36
COMMD3-215ENST00000602574 USF3Q68DE3 2245 aa6.54□□□□□ -1.36
COMMD3-215ENST00000602574 A0A0J9YXY3 114 aa6.53□□□□□ -1.36
COMMD3-215ENST00000602574 GAS8-AS1O95177 125 aa6.53□□□□□ -1.36
COMMD3-215ENST00000602574 Q0VFX4 171 aa6.53□□□□□ -1.36
COMMD3-215ENST00000602574 ECSCRQ19T08 205 aa6.53□□□□□ -1.36
COMMD3-215ENST00000602574 FAM229BQ4G0N7 80 aa6.53□□□□□ -1.36
COMMD3-215ENST00000602574 ADAMTSL4-AS1Q5T5F5 129 aa6.53□□□□□ -1.36
COMMD3-215ENST00000602574 C2orf66Q6UXQ4 117 aa6.53□□□□□ -1.36
COMMD3-215ENST00000602574 LITAFQ99732 161 aa6.53□□□□□ -1.36
COMMD3-215ENST00000602574 MED12Q93074 2177 aa6.53□□□□□ -1.36
COMMD3-215ENST00000602574 MIAQ16674 131 aa6.53□□□□□ -1.36
COMMD3-215ENST00000602574 UNC13CQ8NB66 2214 aa6.53□□□□□ -1.36
COMMD3-215ENST00000602574 IGHV4-4A0A075B6R2 117 aa6.52□□□□□ -1.37
COMMD3-215ENST00000602574 M0R1W7 72 aa6.52□□□□□ -1.37
COMMD3-215ENST00000602574 TRBV12-3P01733 135 aa6.52□□□□□ -1.37
COMMD3-215ENST00000602574 RNASE4P34096 147 aaKnown RBP6.52□□□□□ -1.37
COMMD3-215ENST00000602574 HOXA4Q00056 320 aaPredicted RBP6.52□□□□□ -1.37
COMMD3-215ENST00000602574 RSPO4Q2I0M5 234 aaPredicted RBP6.52□□□□□ -1.37
COMMD3-215ENST00000602574 ZNF876PQ49A33 203 aa6.52□□□□□ -1.37
COMMD3-215ENST00000602574 HIST2H2BCQ6DN03 193 aa6.52□□□□□ -1.37
COMMD3-215ENST00000602574 HIST2H2BDQ6DRA6 164 aa6.52□□□□□ -1.37
COMMD3-215ENST00000602574 TIMM17AQ99595 171 aa6.52□□□□□ -1.37
COMMD3-215ENST00000602574 DOCK7Q96N67 2140 aa6.52□□□□□ -1.37
COMMD3-215ENST00000602574 IGHV3-20A0A0C4DH32 117 aa6.52□□□□□ -1.37
COMMD3-215ENST00000602574 IGHV5-10-1A0A0J9YXX1 117 aa6.52□□□□□ -1.37
COMMD3-215ENST00000602574 TMEM256-PLSCR3K7ERE1 68 aa6.52□□□□□ -1.37
COMMD3-215ENST00000602574 GRPP07492 148 aa6.52□□□□□ -1.37
COMMD3-215ENST00000602574 B3GALT5-AS1P59052 145 aa6.52□□□□□ -1.37
COMMD3-215ENST00000602574 M0R381 172 aa6.51□□□□□ -1.37
COMMD3-215ENST00000602574 TMEM30BQ3MIR4 351 aa6.51□□□□□ -1.37
COMMD3-215ENST00000602574 PROP1O75360 226 aa6.51□□□□□ -1.37
COMMD3-215ENST00000602574 PPP1R17O96001 155 aa6.51□□□□□ -1.37
COMMD3-215ENST00000602574 SOSTDC1Q6X4U4 206 aa6.51□□□□□ -1.37
COMMD3-215ENST00000602574 LCA10Q71F78 164 aa6.51□□□□□ -1.37
COMMD3-215ENST00000602574 GGNQ86UU5 652 aa6.51□□□□□ -1.37
COMMD3-215ENST00000602574 RMI2Q96E14 147 aa6.51□□□□□ -1.37
COMMD3-215ENST00000602574 INTS1Q8N201 2190 aaKnown RBP6.5□□□□□ -1.37
COMMD3-215ENST00000602574 TRAV23DV6A0A075B6W5 121 aa6.5□□□□□ -1.37
COMMD3-215ENST00000602574 CD28P10747 220 aa6.5□□□□□ -1.37
COMMD3-215ENST00000602574 ERHP84090 104 aaKnown RBP6.5□□□□□ -1.37
COMMD3-215ENST00000602574 MLANAQ16655 118 aa6.5□□□□□ -1.37
COMMD3-215ENST00000602574 DSCAMO60469 2012 aa6.5□□□□□ -1.37
COMMD3-215ENST00000602574 IGHV3-15A0A0B4J1V0 119 aa6.5□□□□□ -1.37
COMMD3-215ENST00000602574 MRPL33O75394 65 aaKnown RBP6.5□□□□□ -1.37
COMMD3-215ENST00000602574 EGR2P11161 476 aaPredicted RBP6.5□□□□□ -1.37
COMMD3-215ENST00000602574 PDE6HQ13956 83 aa6.5□□□□□ -1.37
COMMD3-215ENST00000602574 C8orf49Q96NF6 230 aa6.5□□□□□ -1.37
COMMD3-215ENST00000602574 DCTN5Q9BTE1 182 aa6.5□□□□□ -1.37
COMMD3-215ENST00000602574 KNTC1P50748 2209 aa6.49□□□□□ -1.37
COMMD3-215ENST00000602574 ESPL1Q14674 2120 aa6.49□□□□□ -1.37
COMMD3-215ENST00000602574 SUMO2P61956 95 aaKnown RBP6.49□□□□□ -1.37
COMMD3-215ENST00000602574 DIDO1Q9BTC0 2240 aaKnown RBP6.49□□□□□ -1.37
COMMD3-215ENST00000602574 LHBP01229 141 aa6.48□□□□□ -1.37
COMMD3-215ENST00000602574 OPRPNQ99935 248 aaPredicted RBP6.48□□□□□ -1.37
COMMD3-215ENST00000602574 MSRB1Q9NZV6 116 aa6.48□□□□□ -1.37
COMMD3-215ENST00000602574 PHLDA3Q9Y5J5 127 aa6.48□□□□□ -1.37
COMMD3-215ENST00000602574 NACAE9PAV3 2078 aa6.48□□□□□ -1.37
COMMD3-215ENST00000602574 TRBV7-4A0A0J9YYF1 115 aa6.48□□□□□ -1.37
COMMD3-215ENST00000602574 DEFB133Q30KQ1 61 aa6.48□□□□□ -1.37
COMMD3-215ENST00000602574 PRRC2AP48634 2157 aaKnown RBP6.48□□□□□ -1.37
COMMD3-215ENST00000602574 ADARB2-AS1A8MUL3 147 aa6.47□□□□□ -1.37
COMMD3-215ENST00000602574 SOCS3O14543 225 aa6.47□□□□□ -1.37
COMMD3-215ENST00000602574 IGHV1-69P01742 117 aa6.47□□□□□ -1.37
COMMD3-215ENST00000602574 CCL3P10147 92 aa6.47□□□□□ -1.37
COMMD3-215ENST00000602574 PATE4P0C8F1 98 aa6.47□□□□□ -1.37
COMMD3-215ENST00000602574 LINC00205P59089 165 aa6.47□□□□□ -1.37
COMMD3-215ENST00000602574 TFF2Q03403 129 aa6.47□□□□□ -1.37
COMMD3-215ENST00000602574 NDUFA4L2Q9NRX3 87 aa6.47□□□□□ -1.37
COMMD3-215ENST00000602574 TSHBP01222 138 aa6.46□□□□□ -1.37
COMMD3-215ENST00000602574 ATP11AUNQ6ZP68 121 aa6.46□□□□□ -1.37
COMMD3-215ENST00000602574 C7orf65Q6ZTY9 151 aa6.46□□□□□ -1.37
COMMD3-215ENST00000602574 ZNF833PQ6ZTB9 187 aa6.45□□□□□ -1.38
COMMD3-215ENST00000602574 DIRC1Q969H9 104 aa6.45□□□□□ -1.38
COMMD3-215ENST00000602574 SNURFQ9Y675 71 aa6.45□□□□□ -1.38
COMMD3-215ENST00000602574 hDV103S1A0JD37 113 aa6.45□□□□□ -1.38
COMMD3-215ENST00000602574 EPOPA6NHQ4 379 aa6.45□□□□□ -1.38
COMMD3-215ENST00000602574 A6NN06 94 aa6.45□□□□□ -1.38
COMMD3-215ENST00000602574 A8MUN3 132 aa6.45□□□□□ -1.38
COMMD3-215ENST00000602574 CD59P13987 128 aa6.45□□□□□ -1.38
COMMD3-215ENST00000602574 CXXC4Q9H2H0 198 aa6.45□□□□□ -1.38
COMMD3-215ENST00000602574 KLK15Q9H2R5 256 aa6.45□□□□□ -1.38
COMMD3-215ENST00000602574 FOLR3P41439 243 aa6.44□□□□□ -1.38
COMMD3-215ENST00000602574 Q6ZRP5 223 aa6.44□□□□□ -1.38
COMMD3-215ENST00000602574 Q6ZTC4 211 aa6.44□□□□□ -1.38
COMMD3-215ENST00000602574 UBE2AP49459 152 aa6.43□□□□□ -1.38
COMMD3-215ENST00000602574 ZNF407Q9C0G0 2248 aa6.43□□□□□ -1.38
COMMD3-215ENST00000602574 RNF223E7ERA6 249 aa6.43□□□□□ -1.38
COMMD3-215ENST00000602574 H3BRN7 92 aa6.43□□□□□ -1.38
COMMD3-215ENST00000602574 PSPNO60542 156 aa6.43□□□□□ -1.38
COMMD3-215ENST00000602574 FUSP35637 526 aaKnown RBP eCLIP6.43□□□□□ -1.38
COMMD3-215ENST00000602574 LCE2DQ5TA82 110 aaPredicted RBP6.43□□□□□ -1.38
COMMD3-215ENST00000602574 IGFL3Q6UXB1 125 aa6.43□□□□□ -1.38
COMMD3-215ENST00000602574 TRAV12-3A0A0B4J271 114 aa6.42□□□□□ -1.38
COMMD3-215ENST00000602574 VCYO14598 125 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms