RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 DPH3P1Q9H4G8 78 aa12.5□□□□□ -0.41
DDX49-213ENST00000602113 DEFB4AO15263 64 aa12.49□□□□□ -0.41
DDX49-213ENST00000602113 LGALS9BQ3B8N2 356 aa12.49□□□□□ -0.41
DDX49-213ENST00000602113 HIST1H2BKO60814 126 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 HIST1H2BJP06899 126 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 HIST1H2BOP23527 126 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 HIST1H2BBP33778 126 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 HIST1H2BDP58876 126 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 HIST1H2BCP62807 126 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 HIST2H2BEQ16778 126 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.48□□□□□ -0.41
DDX49-213ENST00000602113 HIST1H2BHQ93079 126 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 HIST1H2BNQ99877 126 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 HIST1H2BMQ99879 126 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 GAS8-AS1O95177 125 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 FAM74A4Q5TZK3 123 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 CFAP126Q5VTH2 177 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 POM121L12Q8N7R1 296 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 MRAPQ8TCY5 172 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 ALKBH7Q9BT30 221 aaPredicted RBP12.48□□□□□ -0.41
DDX49-213ENST00000602113 NDUFAF3Q9BU61 184 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 U3KQK5 164 aa12.48□□□□□ -0.41
DDX49-213ENST00000602113 A8MWV9 139 aa12.47□□□□□ -0.41
DDX49-213ENST00000602113 SMKR1H3BMG3 65 aa12.47□□□□□ -0.41
DDX49-213ENST00000602113 RS1O15537 224 aa12.47□□□□□ -0.41
DDX49-213ENST00000602113 MGPP08493 103 aa12.47□□□□□ -0.41
DDX49-213ENST00000602113 SMIM17P0DL12 118 aa12.47□□□□□ -0.41
DDX49-213ENST00000602113 SRIP30626 198 aa12.47□□□□□ -0.41
DDX49-213ENST00000602113 RAB5BP61020 215 aa12.47□□□□□ -0.41
DDX49-213ENST00000602113 UFSP1Q6NVU6 142 aa12.47□□□□□ -0.41
DDX49-213ENST00000602113 TRAV26-2A0A0B4J265 109 aa12.46□□□□□ -0.41
DDX49-213ENST00000602113 GAGE12BA1L429 117 aa12.46□□□□□ -0.41
DDX49-213ENST00000602113 D6R8Y8 96 aa12.46□□□□□ -0.41
DDX49-213ENST00000602113 GAGE7O76087 117 aa12.46□□□□□ -0.41
DDX49-213ENST00000602113 NCR2O95944 276 aa12.46□□□□□ -0.41
DDX49-213ENST00000602113 GAGE12FP0CL80 117 aa12.46□□□□□ -0.41
DDX49-213ENST00000602113 GAGE12GP0CL81 117 aa12.46□□□□□ -0.41
DDX49-213ENST00000602113 GAGE12IP0CL82 117 aa12.46□□□□□ -0.41
DDX49-213ENST00000602113 GATA1P15976 413 aaPredicted RBP12.45□□□□□ -0.42
DDX49-213ENST00000602113 LINC00612Q8N6U2 182 aa12.45□□□□□ -0.42
DDX49-213ENST00000602113 TM2D3Q9BRN9 247 aa12.45□□□□□ -0.42
DDX49-213ENST00000602113 IGHV3-73A0A0B4J1V6 119 aa12.45□□□□□ -0.42
DDX49-213ENST00000602113 CKS2P33552 79 aa12.45□□□□□ -0.42
DDX49-213ENST00000602113 FAM222AQ5U5X8 452 aa12.45□□□□□ -0.42
DDX49-213ENST00000602113 ORMDL3Q8N138 153 aa12.44□□□□□ -0.42
DDX49-213ENST00000602113 DKK2Q9UBU2 259 aa12.44□□□□□ -0.42
DDX49-213ENST00000602113 LYRM9A8MSI8 78 aa12.43□□□□□ -0.42
DDX49-213ENST00000602113 SUMO4Q6EEV6 95 aa12.43□□□□□ -0.42
DDX49-213ENST00000602113 OR4C5Q8NGB2 326 aa12.43□□□□□ -0.42
DDX49-213ENST00000602113 MRAP2Q96G30 205 aa12.43□□□□□ -0.42
DDX49-213ENST00000602113 ZNF479Q96JC4 524 aa12.43□□□□□ -0.42
DDX49-213ENST00000602113 PRELID3AQ96N28 172 aa12.43□□□□□ -0.42
DDX49-213ENST00000602113 SPATA25Q9BR10 227 aa12.43□□□□□ -0.42
DDX49-213ENST00000602113 CELA1Q9UNI1 258 aa12.43□□□□□ -0.42
DDX49-213ENST00000602113 TENM3Q9P273 2699 aa12.43□□□□□ -0.42
DDX49-213ENST00000602113 TRGV2A0A075B6R0 118 aa12.42□□□□□ -0.42
DDX49-213ENST00000602113 TRAV4A0A0B4J268 109 aa12.42□□□□□ -0.42
DDX49-213ENST00000602113 NACAE9PAV3 2078 aa12.42□□□□□ -0.42
DDX49-213ENST00000602113 F5H697 171 aa12.42□□□□□ -0.42
DDX49-213ENST00000602113 PPBPP02775 128 aa12.42□□□□□ -0.42
DDX49-213ENST00000602113 DEFB130BP0DP73 79 aa12.42□□□□□ -0.42
DDX49-213ENST00000602113 DEFB130AP0DP74 79 aa12.42□□□□□ -0.42
DDX49-213ENST00000602113 ZNF56Q15929 161 aa12.42□□□□□ -0.42
DDX49-213ENST00000602113 Q6ZSN1 163 aa12.42□□□□□ -0.42
DDX49-213ENST00000602113 NPYP01303 97 aa12.42□□□□□ -0.42
DDX49-213ENST00000602113 IGHV3-53P01767 116 aa12.42□□□□□ -0.42
DDX49-213ENST00000602113 ZFP2Q6ZN57 461 aa12.42□□□□□ -0.42
DDX49-213ENST00000602113 NRACQ8N912 160 aa12.42□□□□□ -0.42
DDX49-213ENST00000602113 C18orf32Q8TCD1 76 aa12.42□□□□□ -0.42
DDX49-213ENST00000602113 RHODO00212 210 aa12.41□□□□□ -0.42
DDX49-213ENST00000602113 IQCJQ1A5X6 159 aa12.41□□□□□ -0.42
DDX49-213ENST00000602113 C18orf15Q96N68 181 aa12.4□□□□□ -0.42
DDX49-213ENST00000602113 M0QY20 66 aa12.39□□□□□ -0.43
DDX49-213ENST00000602113 TNFRSF6BO95407 300 aa12.39□□□□□ -0.43
DDX49-213ENST00000602113 NDUFA6P56556 154 aa12.39□□□□□ -0.43
DDX49-213ENST00000602113 Q0VG73 95 aa12.39□□□□□ -0.43
DDX49-213ENST00000602113 RPL39LQ96EH5 51 aaKnown RBP12.39□□□□□ -0.43
DDX49-213ENST00000602113 C11orf68Q9H3H3 251 aaKnown RBP12.39□□□□□ -0.43
DDX49-213ENST00000602113 SPART-AS1P0CW21 52 aa12.38□□□□□ -0.43
DDX49-213ENST00000602113 OR10J3Q5JRS4 329 aa12.38□□□□□ -0.43
DDX49-213ENST00000602113 B9D2Q9BPU9 175 aa12.38□□□□□ -0.43
DDX49-213ENST00000602113 MEGF8Q7Z7M0 2845 aa12.38□□□□□ -0.43
DDX49-213ENST00000602113 DEFA6Q01524 100 aa12.38□□□□□ -0.43
DDX49-213ENST00000602113 LAMTOR2Q9Y2Q5 125 aa12.38□□□□□ -0.43
DDX49-213ENST00000602113 HUWE1Q7Z6Z7 4374 aaKnown RBP12.37□□□□□ -0.43
DDX49-213ENST00000602113 A0A0J9YWU9 116 aa12.37□□□□□ -0.43
DDX49-213ENST00000602113 EDA2RQ9HAV5 297 aa12.37□□□□□ -0.43
DDX49-213ENST00000602113 P0DMU3 169 aa12.36□□□□□ -0.43
DDX49-213ENST00000602113 FAM231AP0DMU4 169 aa12.36□□□□□ -0.43
DDX49-213ENST00000602113 FAM231CP0DMU5 169 aa12.36□□□□□ -0.43
DDX49-213ENST00000602113 LINC00310P59036 64 aa12.36□□□□□ -0.43
DDX49-213ENST00000602113 DAD1P61803 113 aa12.36□□□□□ -0.43
DDX49-213ENST00000602113 FHL2Q14192 279 aa12.36□□□□□ -0.43
DDX49-213ENST00000602113 COA6Q5JTJ3 125 aaKnown RBP12.36□□□□□ -0.43
DDX49-213ENST00000602113 Q9UF83 564 aa12.36□□□□□ -0.43
DDX49-213ENST00000602113 LOC389332A0A1B0GUA5 103 aa12.35□□□□□ -0.43
DDX49-213ENST00000602113 BAGE3Q86Y29 109 aa12.35□□□□□ -0.43
DDX49-213ENST00000602113 URB1-AS1Q96HZ7 61 aa12.35□□□□□ -0.43
DDX49-213ENST00000602113 DNAH9Q9NYC9 4486 aa12.35□□□□□ -0.43
DDX49-213ENST00000602113 CIDEAO60543 219 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 1283 ms