RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 PHLDA3Q9Y5J5 127 aa7.29□□□□□ -1.24
UPF1-213ENST00000601981 TRGV11A0A075B6L2 103 aa7.28□□□□□ -1.24
UPF1-213ENST00000601981 GNRH2O43555 120 aa7.28□□□□□ -1.24
UPF1-213ENST00000601981 NUPR1O60356 82 aa7.28□□□□□ -1.24
UPF1-213ENST00000601981 PPBPP02775 128 aa7.28□□□□□ -1.24
UPF1-213ENST00000601981 IQCJQ1A5X6 159 aa7.28□□□□□ -1.24
UPF1-213ENST00000601981 LINC00518Q8N0U6 118 aa7.28□□□□□ -1.24
UPF1-213ENST00000601981 ORMDL3Q8N138 153 aa7.28□□□□□ -1.24
UPF1-213ENST00000601981 C1orf158Q8N1D5 194 aa7.28□□□□□ -1.24
UPF1-213ENST00000601981 OR10D4PQ8NGN7 298 aa7.28□□□□□ -1.24
UPF1-213ENST00000601981 WWC2-AS2Q96NR7 200 aa7.28□□□□□ -1.24
UPF1-213ENST00000601981 LINC00467Q9BRT7 94 aa7.28□□□□□ -1.24
UPF1-213ENST00000601981 MSRB1Q9NZV6 116 aa7.28□□□□□ -1.24
UPF1-213ENST00000601981 TENM3Q9P273 2699 aa7.28□□□□□ -1.24
UPF1-213ENST00000601981 IGHV3-16A0A0C4DH30 117 aa7.27□□□□□ -1.25
UPF1-213ENST00000601981 A0A0J9YWU9 116 aa7.27□□□□□ -1.25
UPF1-213ENST00000601981 TEX48A0A1B0GUV7 120 aa7.27□□□□□ -1.25
UPF1-213ENST00000601981 D6R8Y8 96 aa7.27□□□□□ -1.25
UPF1-213ENST00000601981 RAB4AP20338 218 aa7.27□□□□□ -1.25
UPF1-213ENST00000601981 SSTP61278 116 aa7.27□□□□□ -1.25
UPF1-213ENST00000601981 CHCHD1Q96BP2 118 aaKnown RBP7.27□□□□□ -1.25
UPF1-213ENST00000601981 RNF185Q96GF1 192 aa7.27□□□□□ -1.25
UPF1-213ENST00000601981 C9orf85Q96MD7 179 aa7.27□□□□□ -1.25
UPF1-213ENST00000601981 PRELID3AQ96N28 172 aa7.27□□□□□ -1.25
UPF1-213ENST00000601981 AP1S3Q96PC3 154 aa7.27□□□□□ -1.25
UPF1-213ENST00000601981 LAMTOR2Q9Y2Q5 125 aa7.27□□□□□ -1.25
UPF1-213ENST00000601981 TIMM8BQ9Y5J9 83 aaPredicted RBP7.27□□□□□ -1.25
UPF1-213ENST00000601981 X6R8D5 127 aa7.27□□□□□ -1.25
UPF1-213ENST00000601981 STAB2Q8WWQ8 2551 aa7.26□□□□□ -1.25
UPF1-213ENST00000601981 IGHV4-28A0A0C4DH34 117 aa7.26□□□□□ -1.25
UPF1-213ENST00000601981 RBMY1A1P0DJD3 496 aaKnown RBP7.26□□□□□ -1.25
UPF1-213ENST00000601981 RBMY1CP0DJD4 496 aa7.26□□□□□ -1.25
UPF1-213ENST00000601981 HTN1P15515 57 aa7.26□□□□□ -1.25
UPF1-213ENST00000601981 CKS2P33552 79 aa7.26□□□□□ -1.25
UPF1-213ENST00000601981 RBMY1FQ15415 496 aaKnown RBP7.26□□□□□ -1.25
UPF1-213ENST00000601981 Q8NAQ8 132 aa7.26□□□□□ -1.25
UPF1-213ENST00000601981 C16orf74Q96GX8 76 aa7.26□□□□□ -1.25
UPF1-213ENST00000601981 SAMD10Q9BYL1 202 aa7.26□□□□□ -1.25
UPF1-213ENST00000601981 HUWE1Q7Z6Z7 4374 aaKnown RBP7.26□□□□□ -1.25
UPF1-213ENST00000601981 M0R381 172 aa7.25□□□□□ -1.25
UPF1-213ENST00000601981 EVI2AP22794 236 aa7.25□□□□□ -1.25
UPF1-213ENST00000601981 RNASEKQ6P5S7 137 aaKnown RBP7.25□□□□□ -1.25
UPF1-213ENST00000601981 NIT1Q86X76 327 aa7.25□□□□□ -1.25
UPF1-213ENST00000601981 SYT8Q8NBV8 401 aa7.25□□□□□ -1.25
UPF1-213ENST00000601981 TMEM263Q8WUH6 116 aaKnown RBP7.25□□□□□ -1.25
UPF1-213ENST00000601981 MRAP2Q96G30 205 aa7.25□□□□□ -1.25
UPF1-213ENST00000601981 URB1-AS1Q96HZ7 61 aa7.25□□□□□ -1.25
UPF1-213ENST00000601981 DPH3P1Q9H4G8 78 aa7.25□□□□□ -1.25
UPF1-213ENST00000601981 EDA2RQ9HAV5 297 aa7.25□□□□□ -1.25
UPF1-213ENST00000601981 CBY3A6NI87 242 aa7.24□□□□□ -1.25
UPF1-213ENST00000601981 HSBP1O75506 76 aa7.24□□□□□ -1.25
UPF1-213ENST00000601981 SPART-AS1P0CW21 52 aa7.24□□□□□ -1.25
UPF1-213ENST00000601981 PMCHP20382 165 aa7.24□□□□□ -1.25
UPF1-213ENST00000601981 AMTP48728 403 aa7.24□□□□□ -1.25
UPF1-213ENST00000601981 C11orf45Q8TAV5 145 aa7.24□□□□□ -1.25
UPF1-213ENST00000601981 C12orf57Q99622 126 aa7.24□□□□□ -1.25
UPF1-213ENST00000601981 GSN-AS1Q9NRJ2 163 aa7.24□□□□□ -1.25
UPF1-213ENST00000601981 SMKR1H3BMG3 65 aa7.23□□□□□ -1.25
UPF1-213ENST00000601981 DEFB4AO15263 64 aa7.23□□□□□ -1.25
UPF1-213ENST00000601981 NCR2O95944 276 aa7.23□□□□□ -1.25
UPF1-213ENST00000601981 NPYP01303 97 aa7.23□□□□□ -1.25
UPF1-213ENST00000601981 LINC00614P0C842 121 aa7.23□□□□□ -1.25
UPF1-213ENST00000601981 EMP1P54849 157 aa7.23□□□□□ -1.25
UPF1-213ENST00000601981 ZNF415Q09FC8 603 aa7.23□□□□□ -1.25
UPF1-213ENST00000601981 PYY3Q5JQD4 70 aa7.23□□□□□ -1.25
UPF1-213ENST00000601981 POM121L12Q8N7R1 296 aa7.23□□□□□ -1.25
UPF1-213ENST00000601981 PTH2Q96A98 100 aa7.23□□□□□ -1.25
UPF1-213ENST00000601981 MDFICQ9P1T7 246 aa7.23□□□□□ -1.25
UPF1-213ENST00000601981 LYRM9A8MSI8 78 aa7.22□□□□□ -1.25
UPF1-213ENST00000601981 TNFRSF6BO95407 300 aa7.22□□□□□ -1.25
UPF1-213ENST00000601981 SMIM17P0DL12 118 aa7.22□□□□□ -1.25
UPF1-213ENST00000601981 JOSD1Q15040 202 aaPredicted RBP7.22□□□□□ -1.25
UPF1-213ENST00000601981 PIK3CD-AS1Q5SR53 167 aa7.22□□□□□ -1.25
UPF1-213ENST00000601981 FA2HQ7L5A8 372 aa7.22□□□□□ -1.25
UPF1-213ENST00000601981 C14orf178Q8N769 122 aaPredicted RBP7.22□□□□□ -1.25
UPF1-213ENST00000601981 PRSS3P2Q8NHM4 247 aa7.22□□□□□ -1.25
UPF1-213ENST00000601981 MUC7Q8TAX7 377 aa7.22□□□□□ -1.25
UPF1-213ENST00000601981 MAP1LC3AQ9H492 121 aa7.22□□□□□ -1.25
UPF1-213ENST00000601981 AP5S1Q9NUS5 200 aa7.22□□□□□ -1.25
UPF1-213ENST00000601981 KIF25-AS1Q9Y6Z4 181 aa7.22□□□□□ -1.25
UPF1-213ENST00000601981 PRSS47A8MTI9 375 aa7.21□□□□□ -1.26
UPF1-213ENST00000601981 FAM19A2Q8N3H0 131 aa7.21□□□□□ -1.26
UPF1-213ENST00000601981 NRACQ8N912 160 aa7.21□□□□□ -1.26
UPF1-213ENST00000601981 RNASE8Q8TDE3 154 aaKnown RBP7.21□□□□□ -1.26
UPF1-213ENST00000601981 SPXQ9BT56 116 aa7.21□□□□□ -1.26
UPF1-213ENST00000601981 IGHV1-24A0A0C4DH33 117 aa7.2□□□□□ -1.26
UPF1-213ENST00000601981 LINC01546A6NGU7 62 aa7.2□□□□□ -1.26
UPF1-213ENST00000601981 C3orf84H3BNL1 204 aa7.2□□□□□ -1.26
UPF1-213ENST00000601981 M0R2P5 195 aa7.2□□□□□ -1.26
UPF1-213ENST00000601981 PPP1R17O96001 155 aa7.2□□□□□ -1.26
UPF1-213ENST00000601981 MGPP08493 103 aa7.2□□□□□ -1.26
UPF1-213ENST00000601981 AZU1P20160 251 aa7.2□□□□□ -1.26
UPF1-213ENST00000601981 IFI27P40305 119 aaPredicted RBP7.2□□□□□ -1.26
UPF1-213ENST00000601981 LINC00315P59091 139 aa7.2□□□□□ -1.26
UPF1-213ENST00000601981 DAD1P61803 113 aa7.2□□□□□ -1.26
UPF1-213ENST00000601981 FAM222AQ5U5X8 452 aa7.2□□□□□ -1.26
UPF1-213ENST00000601981 C11orf72Q8NBR9 251 aa7.2□□□□□ -1.26
UPF1-213ENST00000601981 NDUFAF3Q9BU61 184 aa7.2□□□□□ -1.26
UPF1-213ENST00000601981 KRTAP3-3Q9BYR6 98 aa7.2□□□□□ -1.26
UPF1-213ENST00000601981 KRTAP3-2Q9BYR7 98 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms