RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 CTRLP40313 264 aa10.12□□□□□ -0.79
LTBP4-228ENST00000600499 CACNG7P62955 275 aa10.12□□□□□ -0.79
LTBP4-228ENST00000600499 MRPL23Q16540 153 aaKnown RBP10.12□□□□□ -0.79
LTBP4-228ENST00000600499 SLC25A29Q8N8R3 303 aa10.12□□□□□ -0.79
LTBP4-228ENST00000600499 ICOSQ9Y6W8 199 aa10.12□□□□□ -0.79
LTBP4-228ENST00000600499 A8MWL6 223 aa10.11□□□□□ -0.79
LTBP4-228ENST00000600499 K7EQD1 137 aa10.11□□□□□ -0.79
LTBP4-228ENST00000600499 ERVFC1-1P60608 527 aa10.11□□□□□ -0.79
LTBP4-228ENST00000600499 SPANXN1Q5VSR9 72 aa10.11□□□□□ -0.79
LTBP4-228ENST00000600499 UQCC3Q6UW78 93 aa10.11□□□□□ -0.79
LTBP4-228ENST00000600499 KIF25-AS1Q9Y6Z4 181 aa10.11□□□□□ -0.79
LTBP4-228ENST00000600499 CCL18P55774 89 aa10.1□□□□□ -0.79
LTBP4-228ENST00000600499 RHOHQ15669 191 aa10.1□□□□□ -0.79
LTBP4-228ENST00000600499 LYZL1Q6UWQ5 148 aa10.1□□□□□ -0.79
LTBP4-228ENST00000600499 Q6ZSN1 163 aa10.1□□□□□ -0.79
LTBP4-228ENST00000600499 GTSF1Q8WW33 167 aa10.1□□□□□ -0.79
LTBP4-228ENST00000600499 UPK3BQ9BT76 320 aa10.1□□□□□ -0.79
LTBP4-228ENST00000600499 GFRA4Q9GZZ7 299 aa10.1□□□□□ -0.79
LTBP4-228ENST00000600499 V9GYV3 84 aa10.1□□□□□ -0.79
LTBP4-228ENST00000600499 GYPEP15421 78 aa10.09□□□□□ -0.79
LTBP4-228ENST00000600499 TIRAPP58753 221 aa10.09□□□□□ -0.79
LTBP4-228ENST00000600499 LINC00315P59091 139 aa10.09□□□□□ -0.79
LTBP4-228ENST00000600499 ESRGQ1W209 222 aa10.09□□□□□ -0.79
LTBP4-228ENST00000600499 SH2D6Q7Z4S9 175 aa10.09□□□□□ -0.79
LTBP4-228ENST00000600499 TSKUQ8WUA8 353 aa10.09□□□□□ -0.79
LTBP4-228ENST00000600499 PRADC1Q9BSG0 188 aa10.09□□□□□ -0.79
LTBP4-228ENST00000600499 LINC00588Q9Y4M8 146 aa10.09□□□□□ -0.79
LTBP4-228ENST00000600499 IGHV3-73A0A0B4J1V6 119 aa10.08□□□□□ -0.8
LTBP4-228ENST00000600499 LINC00862A6NCI5 91 aa10.08□□□□□ -0.8
LTBP4-228ENST00000600499 LINC00694P0DN24 101 aa10.08□□□□□ -0.8
LTBP4-228ENST00000600499 NEGR1Q7Z3B1 354 aa10.08□□□□□ -0.8
LTBP4-228ENST00000600499 C15orf54Q8N8G6 183 aa10.08□□□□□ -0.8
LTBP4-228ENST00000600499 A0A087WWL8 130 aa10.07□□□□□ -0.8
LTBP4-228ENST00000600499 MUC21A0A0G2JKD1 596 aa10.07□□□□□ -0.8
LTBP4-228ENST00000600499 MUC21A0A140T8X8 626 aa10.07□□□□□ -0.8
LTBP4-228ENST00000600499 NTF3P20783 257 aa10.07□□□□□ -0.8
LTBP4-228ENST00000600499 SRIP30626 198 aa10.07□□□□□ -0.8
LTBP4-228ENST00000600499 RAB4BP61018 213 aa10.07□□□□□ -0.8
LTBP4-228ENST00000600499 ADIRFQ15847 76 aa10.07□□□□□ -0.8
LTBP4-228ENST00000600499 ZNRF2Q8NHG8 242 aa10.07□□□□□ -0.8
LTBP4-228ENST00000600499 AP1S3Q96PC3 154 aa10.07□□□□□ -0.8
LTBP4-228ENST00000600499 MSRB1Q9NZV6 116 aa10.07□□□□□ -0.8
LTBP4-228ENST00000600499 MRPS16Q9Y3D3 137 aaKnown RBP10.07□□□□□ -0.8
LTBP4-228ENST00000600499 TRBV10-1A0A0K0K1A3 114 aa10.06□□□□□ -0.8
LTBP4-228ENST00000600499 LOC100131303A0A0U1RQF7 123 aa10.06□□□□□ -0.8
LTBP4-228ENST00000600499 PNRC1Q12796 327 aaPredicted RBP10.06□□□□□ -0.8
LTBP4-228ENST00000600499 FAM74A4Q5TZK3 123 aa10.06□□□□□ -0.8
LTBP4-228ENST00000600499 LYPD5Q6UWN5 251 aa10.06□□□□□ -0.8
LTBP4-228ENST00000600499 UBE2DNLQ8IWF7 75 aa10.06□□□□□ -0.8
LTBP4-228ENST00000600499 C14orf178Q8N769 122 aaPredicted RBP10.06□□□□□ -0.8
LTBP4-228ENST00000600499 OR10G8Q8NGN5 311 aa10.06□□□□□ -0.8
LTBP4-228ENST00000600499 TPPP3Q9BW30 176 aa10.06□□□□□ -0.8
LTBP4-228ENST00000600499 TRGC1P0CF51 173 aa10.05□□□□□ -0.8
LTBP4-228ENST00000600499 TMEM218A2RU14 115 aa10.04□□□□□ -0.8
LTBP4-228ENST00000600499 HIGD1CA8MV81 97 aa10.04□□□□□ -0.8
LTBP4-228ENST00000600499 Q9UF83 564 aa10.04□□□□□ -0.8
LTBP4-228ENST00000600499 SMIM27A0A1W2PRY6 76 aa10.03□□□□□ -0.8
LTBP4-228ENST00000600499 SMIM17P0DL12 118 aa10.03□□□□□ -0.8
LTBP4-228ENST00000600499 EVI2AP22794 236 aa10.03□□□□□ -0.8
LTBP4-228ENST00000600499 Q6ZR54 194 aa10.03□□□□□ -0.8
LTBP4-228ENST00000600499 DPH3P1Q9H4G8 78 aa10.03□□□□□ -0.8
LTBP4-228ENST00000600499 DNAH2Q9P225 4427 aa10.02□□□□□ -0.81
LTBP4-228ENST00000600499 ADCYAP1P18509 176 aa10.02□□□□□ -0.81
LTBP4-228ENST00000600499 TWIST1Q15672 202 aa10.02□□□□□ -0.81
LTBP4-228ENST00000600499 COMMD7Q86VX2 200 aa10.02□□□□□ -0.81
LTBP4-228ENST00000600499 NUP35Q8NFH5 326 aa10.02□□□□□ -0.81
LTBP4-228ENST00000600499 PGLYRP4Q96LB8 373 aa10.02□□□□□ -0.81
LTBP4-228ENST00000600499 Q9H8V8 135 aa10.02□□□□□ -0.81
LTBP4-228ENST00000600499 NAT8BQ9UHF3 227 aa10.02□□□□□ -0.81
LTBP4-228ENST00000600499 DNAH10Q8IVF4 4471 aa10.01□□□□□ -0.81
LTBP4-228ENST00000600499 A0A1B0GUT8 65 aa10.01□□□□□ -0.81
LTBP4-228ENST00000600499 M0QY20 66 aa10.01□□□□□ -0.81
LTBP4-228ENST00000600499 PPP1R2P9O14990 202 aa10.01□□□□□ -0.81
LTBP4-228ENST00000600499 SSTP61278 116 aa10.01□□□□□ -0.81
LTBP4-228ENST00000600499 C10orf91Q5T1B1 145 aa10.01□□□□□ -0.81
LTBP4-228ENST00000600499 ATP6V0E2Q8NHE4 81 aa10.01□□□□□ -0.81
LTBP4-228ENST00000600499 SEC11CQ9BY50 192 aa10.01□□□□□ -0.81
LTBP4-228ENST00000600499 GTSF1LQ9H1H1 148 aa10.01□□□□□ -0.81
LTBP4-228ENST00000600499 TRBV7-3A0A075B6L6 115 aa10□□□□□ -0.81
LTBP4-228ENST00000600499 UBE2D3P61077 147 aa10□□□□□ -0.81
LTBP4-228ENST00000600499 UBE2D2P62837 147 aa10□□□□□ -0.81
LTBP4-228ENST00000600499 ZNF56Q15929 161 aa10□□□□□ -0.81
LTBP4-228ENST00000600499 NEXN-AS1Q8NBZ9 246 aa10□□□□□ -0.81
LTBP4-228ENST00000600499 FRZBQ92765 325 aa10□□□□□ -0.81
LTBP4-228ENST00000600499 GAGE12JA6NER3 117 aa9.99□□□□□ -0.81
LTBP4-228ENST00000600499 RPL36AP83881 106 aaKnown RBP9.99□□□□□ -0.81
LTBP4-228ENST00000600499 GAGE1Q13065 139 aa9.99□□□□□ -0.81
LTBP4-228ENST00000600499 GAGE4Q13068 117 aa9.99□□□□□ -0.81
LTBP4-228ENST00000600499 GAGE5Q13069 117 aa9.99□□□□□ -0.81
LTBP4-228ENST00000600499 GAGE13Q4V321 117 aa9.99□□□□□ -0.81
LTBP4-228ENST00000600499 RPL36ALQ969Q0 106 aaKnown RBP9.99□□□□□ -0.81
LTBP4-228ENST00000600499 BORCS7Q96B45 105 aa9.99□□□□□ -0.81
LTBP4-228ENST00000600499 ANAPC16Q96DE5 110 aa9.99□□□□□ -0.81
LTBP4-228ENST00000600499 TMEM191AQ9H0A3 160 aa9.99□□□□□ -0.81
LTBP4-228ENST00000600499 FRAS1Q86XX4 4008 aa9.98□□□□□ -0.81
LTBP4-228ENST00000600499 NBDYA0A0U1RRE5 68 aa9.98□□□□□ -0.81
LTBP4-228ENST00000600499 F5H697 171 aa9.98□□□□□ -0.81
LTBP4-228ENST00000600499 F8W036 122 aa9.98□□□□□ -0.81
LTBP4-228ENST00000600499 H7C1H1 209 aa9.98□□□□□ -0.81
LTBP4-228ENST00000600499 BTF3P20290 206 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms