RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 LURAP1LQ8IV03 231 aa11.1□□□□□ -0.63
RETREG3-208ENST00000589797 TMEM61Q8N0U2 210 aa11.1□□□□□ -0.63
RETREG3-208ENST00000589797 ZFHX4Q86UP3 3567 aa11.1□□□□□ -0.63
RETREG3-208ENST00000589797 K7ERU9 68 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 GAGE12BA1L429 117 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 GAGE7O76087 117 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 GAGE12FP0CL80 117 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 GAGE12GP0CL81 117 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 GAGE12IP0CL82 117 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 ZNF415Q09FC8 603 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 Q8N1Y9 231 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 GAGE12JA6NER3 117 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 C2orf70A6NJV1 201 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 CCL24O00175 119 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 INSP01308 110 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 GAGE1Q13065 139 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 GAGE4Q13068 117 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 GAGE5Q13069 117 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 GAGE13Q4V321 117 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 C11orf68Q9H3H3 251 aaKnown RBP11.09□□□□□ -0.63
RETREG3-208ENST00000589797 CHD6Q8TD26 2715 aa11.09□□□□□ -0.63
RETREG3-208ENST00000589797 FSTL3O95633 263 aa11.08□□□□□ -0.64
RETREG3-208ENST00000589797 C18orf65Q6ZTR6 163 aa11.08□□□□□ -0.64
RETREG3-208ENST00000589797 MEGF9Q9H1U4 602 aa11.08□□□□□ -0.64
RETREG3-208ENST00000589797 ADARB2-AS1A8MUL3 147 aa11.08□□□□□ -0.64
RETREG3-208ENST00000589797 MGAM2Q2M2H8 2515 aa11.08□□□□□ -0.64
RETREG3-208ENST00000589797 A0A096LPF7 62 aa11.07□□□□□ -0.64
RETREG3-208ENST00000589797 KIR2DL5BA0A0G2JN68 375 aa11.07□□□□□ -0.64
RETREG3-208ENST00000589797 KIR2DL5BA0A0G2JPC4 375 aa11.07□□□□□ -0.64
RETREG3-208ENST00000589797 KIR2DL5AQ8N109 375 aa11.07□□□□□ -0.64
RETREG3-208ENST00000589797 RPL39P62891 51 aaKnown RBP11.07□□□□□ -0.64
RETREG3-208ENST00000589797 ZNRF2Q8NHG8 242 aa11.07□□□□□ -0.64
RETREG3-208ENST00000589797 H3BUA1 57 aa11.07□□□□□ -0.64
RETREG3-208ENST00000589797 HSD52Q0P140 79 aa11.07□□□□□ -0.64
RETREG3-208ENST00000589797 F8W735 103 aaPredicted RBP11.06□□□□□ -0.64
RETREG3-208ENST00000589797 LINC00310P59036 64 aa11.06□□□□□ -0.64
RETREG3-208ENST00000589797 LINC01559Q495D7 138 aa11.06□□□□□ -0.64
RETREG3-208ENST00000589797 DLX4Q92988 240 aaPredicted RBP11.06□□□□□ -0.64
RETREG3-208ENST00000589797 CHAC1Q9BUX1 264 aa11.06□□□□□ -0.64
RETREG3-208ENST00000589797 C11orf21Q9P2W6 132 aa11.06□□□□□ -0.64
RETREG3-208ENST00000589797 CIDEAO60543 219 aa11.06□□□□□ -0.64
RETREG3-208ENST00000589797 C9orf47Q6ZRZ4 202 aa11.06□□□□□ -0.64
RETREG3-208ENST00000589797 MAST4O15021 2626 aa11.06□□□□□ -0.64
RETREG3-208ENST00000589797 RBAKDNA6NC62 111 aa11.06□□□□□ -0.64
RETREG3-208ENST00000589797 IGHV4-31P0DP07 118 aa11.06□□□□□ -0.64
RETREG3-208ENST00000589797 OR9G4Q8NGQ1 327 aa11.06□□□□□ -0.64
RETREG3-208ENST00000589797 ZNF48Q96MX3 618 aaPredicted RBP11.06□□□□□ -0.64
RETREG3-208ENST00000589797 MRPS16Q9Y3D3 137 aaKnown RBP11.06□□□□□ -0.64
RETREG3-208ENST00000589797 CITED2Q99967 270 aaPredicted RBP11.05□□□□□ -0.64
RETREG3-208ENST00000589797 A0A1B0GWB2 263 aa11.05□□□□□ -0.64
RETREG3-208ENST00000589797 K7ERJ3 54 aa11.05□□□□□ -0.64
RETREG3-208ENST00000589797 TRAV8-2A0A0B4J237 113 aa11.04□□□□□ -0.64
RETREG3-208ENST00000589797 SAMD5Q5TGI4 173 aa11.04□□□□□ -0.64
RETREG3-208ENST00000589797 TMEM101Q96IK0 257 aa11.04□□□□□ -0.64
RETREG3-208ENST00000589797 ITPR1Q14643 2758 aa11.04□□□□□ -0.64
RETREG3-208ENST00000589797 PRSS29PA6NIE9 313 aa11.04□□□□□ -0.64
RETREG3-208ENST00000589797 RPL36AP83881 106 aaKnown RBP11.04□□□□□ -0.64
RETREG3-208ENST00000589797 OR13C6PQ8NH95 151 aa11.04□□□□□ -0.64
RETREG3-208ENST00000589797 RPL36ALQ969Q0 106 aaKnown RBP11.04□□□□□ -0.64
RETREG3-208ENST00000589797 ZNF479Q96JC4 524 aa11.04□□□□□ -0.64
RETREG3-208ENST00000589797 ATP6V0BQ99437 205 aa11.04□□□□□ -0.64
RETREG3-208ENST00000589797 COX8AP10176 69 aa11.04□□□□□ -0.64
RETREG3-208ENST00000589797 ESDP10768 282 aa11.04□□□□□ -0.64
RETREG3-208ENST00000589797 PLNP26678 52 aa11.04□□□□□ -0.64
RETREG3-208ENST00000589797 LGALS9BQ3B8N2 356 aa11.04□□□□□ -0.64
RETREG3-208ENST00000589797 LGALS9CQ6DKI2 356 aa11.04□□□□□ -0.64
RETREG3-208ENST00000589797 AZU1P20160 251 aa11.03□□□□□ -0.64
RETREG3-208ENST00000589797 PRR9Q5T870 116 aa11.03□□□□□ -0.64
RETREG3-208ENST00000589797 GPHB5Q86YW7 130 aa11.03□□□□□ -0.64
RETREG3-208ENST00000589797 PRADC1Q9BSG0 188 aa11.03□□□□□ -0.64
RETREG3-208ENST00000589797 CD5LO43866 347 aa11.03□□□□□ -0.64
RETREG3-208ENST00000589797 IGHG4P01861 327 aa11.03□□□□□ -0.64
RETREG3-208ENST00000589797 RNASE1P07998 156 aaKnown RBP11.03□□□□□ -0.64
RETREG3-208ENST00000589797 CIRBPQ14011 172 aaKnown RBP11.03□□□□□ -0.64
RETREG3-208ENST00000589797 ADAMTSL5Q6ZMM2 481 aa11.03□□□□□ -0.64
RETREG3-208ENST00000589797 OPRPNQ99935 248 aaPredicted RBP11.03□□□□□ -0.64
RETREG3-208ENST00000589797 NOP10Q9NPE3 64 aaKnown RBP11.03□□□□□ -0.64
RETREG3-208ENST00000589797 ESM1Q9NQ30 184 aa11.03□□□□□ -0.64
RETREG3-208ENST00000589797 COX11Q9Y6N1 276 aa11.03□□□□□ -0.64
RETREG3-208ENST00000589797 CLPSL1A2RUU4 121 aa11.03□□□□□ -0.64
RETREG3-208ENST00000589797 U3KQE9 123 aa11.03□□□□□ -0.64
RETREG3-208ENST00000589797 CTRLP40313 264 aa11.02□□□□□ -0.64
RETREG3-208ENST00000589797 SUMO4Q6EEV6 95 aa11.02□□□□□ -0.64
RETREG3-208ENST00000589797 TRPT1Q86TN4 253 aaKnown RBP11.02□□□□□ -0.64
RETREG3-208ENST00000589797 SEC11AP67812 179 aa11.02□□□□□ -0.65
RETREG3-208ENST00000589797 LYRM7Q5U5X0 104 aa11.02□□□□□ -0.65
RETREG3-208ENST00000589797 P0DMU3 169 aa11.02□□□□□ -0.65
RETREG3-208ENST00000589797 FAM231AP0DMU4 169 aa11.02□□□□□ -0.65
RETREG3-208ENST00000589797 FAM231CP0DMU5 169 aa11.02□□□□□ -0.65
RETREG3-208ENST00000589797 MRPL53Q96EL3 112 aaKnown RBP11.02□□□□□ -0.65
RETREG3-208ENST00000589797 ASH1LQ9NR48 2969 aaKnown RBP11.01□□□□□ -0.65
RETREG3-208ENST00000589797 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.01□□□□□ -0.65
RETREG3-208ENST00000589797 IGKV2-29A2NJV5 120 aaPredicted RBP11.01□□□□□ -0.65
RETREG3-208ENST00000589797 LENEPQ9Y5L5 61 aa11.01□□□□□ -0.65
RETREG3-208ENST00000589797 FOXI2Q6ZQN5 318 aa11.01□□□□□ -0.65
RETREG3-208ENST00000589797 F8VRH5 84 aa11.01□□□□□ -0.65
RETREG3-208ENST00000589797 PIFOQ8TCI5 191 aa11□□□□□ -0.65
RETREG3-208ENST00000589797 BVES-AS1Q5T3Y7 98 aa11□□□□□ -0.65
RETREG3-208ENST00000589797 GATD1Q8NB37 220 aa11□□□□□ -0.65
RETREG3-208ENST00000589797 SMR3AQ99954 134 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms