RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 PLAC8L1A1L4L8 177 aa16■□□□□ 0.15
ATG4D-209ENST00000588857 S100A6P06703 90 aa16■□□□□ 0.15
ATG4D-209ENST00000588857 MGPP08493 103 aa16■□□□□ 0.15
ATG4D-209ENST00000588857 CKS2P33552 79 aa16■□□□□ 0.15
ATG4D-209ENST00000588857 RASL10AQ92737 203 aa16■□□□□ 0.15
ATG4D-209ENST00000588857 ALKBH7Q9BT30 221 aaPredicted RBP16■□□□□ 0.15
ATG4D-209ENST00000588857 NDUFAF3Q9BU61 184 aa16■□□□□ 0.15
ATG4D-209ENST00000588857 A8MWV9 139 aa16■□□□□ 0.15
ATG4D-209ENST00000588857 K7EIL1 84 aa16■□□□□ 0.15
ATG4D-209ENST00000588857 LGALS9BQ3B8N2 356 aa16■□□□□ 0.15
ATG4D-209ENST00000588857 ORMDL3Q8N138 153 aa16■□□□□ 0.15
ATG4D-209ENST00000588857 KIF25-AS1Q9Y6Z4 181 aa16■□□□□ 0.15
ATG4D-209ENST00000588857 D6R8Y8 96 aa15.99■□□□□ 0.15
ATG4D-209ENST00000588857 PPBPP02775 128 aa15.99■□□□□ 0.15
ATG4D-209ENST00000588857 EMP1P54849 157 aa15.99■□□□□ 0.15
ATG4D-209ENST00000588857 FAM74A4Q5TZK3 123 aa15.99■□□□□ 0.15
ATG4D-209ENST00000588857 NDUFA6P56556 154 aa15.98■□□□□ 0.15
ATG4D-209ENST00000588857 DEFB121Q5J5C9 76 aa15.98■□□□□ 0.15
ATG4D-209ENST00000588857 MRAPQ8TCY5 172 aa15.98■□□□□ 0.15
ATG4D-209ENST00000588857 OVOL2Q9BRP0 275 aa15.98■□□□□ 0.15
ATG4D-209ENST00000588857 MIFP14174 115 aa15.97■□□□□ 0.15
ATG4D-209ENST00000588857 MRAP2Q96G30 205 aa15.97■□□□□ 0.15
ATG4D-209ENST00000588857 SAMD10Q9BYL1 202 aa15.97■□□□□ 0.15
ATG4D-209ENST00000588857 TP53TG1Q9Y2A0 90 aa15.97■□□□□ 0.15
ATG4D-209ENST00000588857 U3KQK5 164 aa15.97■□□□□ 0.15
ATG4D-209ENST00000588857 F5H697 171 aa15.96■□□□□ 0.15
ATG4D-209ENST00000588857 CRYGDP07320 174 aa15.96■□□□□ 0.15
ATG4D-209ENST00000588857 Q6ZTI0 123 aa15.96■□□□□ 0.15
ATG4D-209ENST00000588857 PRELID3AQ96N28 172 aa15.96■□□□□ 0.15
ATG4D-209ENST00000588857 NACAE9PAV3 2078 aa15.96■□□□□ 0.15
ATG4D-209ENST00000588857 SMKR1H3BMG3 65 aa15.96■□□□□ 0.14
ATG4D-209ENST00000588857 NCR2O95944 276 aa15.96■□□□□ 0.14
ATG4D-209ENST00000588857 TRAV26-2A0A0B4J265 109 aa15.95■□□□□ 0.14
ATG4D-209ENST00000588857 LINC00315P59091 139 aa15.95■□□□□ 0.14
ATG4D-209ENST00000588857 OR10J3Q5JRS4 329 aa15.95■□□□□ 0.14
ATG4D-209ENST00000588857 CFAP126Q5VTH2 177 aa15.95■□□□□ 0.14
ATG4D-209ENST00000588857 IGHV4-28A0A0C4DH34 117 aa15.94■□□□□ 0.14
ATG4D-209ENST00000588857 Q0VG73 95 aa15.94■□□□□ 0.14
ATG4D-209ENST00000588857 ZNF56Q15929 161 aa15.94■□□□□ 0.14
ATG4D-209ENST00000588857 BAGE3Q86Y29 109 aa15.94■□□□□ 0.14
ATG4D-209ENST00000588857 POM121L12Q8N7R1 296 aa15.94■□□□□ 0.14
ATG4D-209ENST00000588857 C18orf32Q8TCD1 76 aa15.94■□□□□ 0.14
ATG4D-209ENST00000588857 TGP01266 2768 aa15.93■□□□□ 0.14
ATG4D-209ENST00000588857 RHODO00212 210 aa15.93■□□□□ 0.14
ATG4D-209ENST00000588857 RS1O15537 224 aa15.93■□□□□ 0.14
ATG4D-209ENST00000588857 TRGV2A0A075B6R0 118 aa15.92■□□□□ 0.14
ATG4D-209ENST00000588857 GAGE12BA1L429 117 aa15.92■□□□□ 0.14
ATG4D-209ENST00000588857 GAGE7O76087 117 aa15.92■□□□□ 0.14
ATG4D-209ENST00000588857 GAGE12FP0CL80 117 aa15.92■□□□□ 0.14
ATG4D-209ENST00000588857 GAGE12GP0CL81 117 aa15.92■□□□□ 0.14
ATG4D-209ENST00000588857 GAGE12IP0CL82 117 aa15.92■□□□□ 0.14
ATG4D-209ENST00000588857 OR4C5Q8NGB2 326 aa15.92■□□□□ 0.14
ATG4D-209ENST00000588857 LAMTOR2Q9Y2Q5 125 aa15.92■□□□□ 0.14
ATG4D-209ENST00000588857 Q8NAQ8 132 aa15.92■□□□□ 0.14
ATG4D-209ENST00000588857 RETNQ9HD89 108 aa15.92■□□□□ 0.14
ATG4D-209ENST00000588857 IGHV3-73A0A0B4J1V6 119 aa15.91■□□□□ 0.14
ATG4D-209ENST00000588857 DEFB4AO15263 64 aa15.91■□□□□ 0.14
ATG4D-209ENST00000588857 GAS8-AS1O95177 125 aa15.91■□□□□ 0.14
ATG4D-209ENST00000588857 NPYP01303 97 aa15.91■□□□□ 0.14
ATG4D-209ENST00000588857 IQCJQ1A5X6 159 aa15.91■□□□□ 0.14
ATG4D-209ENST00000588857 SUMO4Q6EEV6 95 aa15.91■□□□□ 0.14
ATG4D-209ENST00000588857 TRAV4A0A0B4J268 109 aa15.9■□□□□ 0.14
ATG4D-209ENST00000588857 TNFRSF6BO95407 300 aa15.9■□□□□ 0.14
ATG4D-209ENST00000588857 GATA1P15976 413 aaPredicted RBP15.9■□□□□ 0.14
ATG4D-209ENST00000588857 SNRPEP62304 92 aaKnown RBP15.9■□□□□ 0.14
ATG4D-209ENST00000588857 UFSP1Q6NVU6 142 aa15.9■□□□□ 0.14
ATG4D-209ENST00000588857 ZFP2Q6ZN57 461 aa15.9■□□□□ 0.14
ATG4D-209ENST00000588857 SBSPONQ8IVN8 264 aa15.9■□□□□ 0.14
ATG4D-209ENST00000588857 LYRM9A8MSI8 78 aa15.89■□□□□ 0.13
ATG4D-209ENST00000588857 PPP1R17O96001 155 aa15.89■□□□□ 0.13
ATG4D-209ENST00000588857 COA6Q5JTJ3 125 aaKnown RBP15.89■□□□□ 0.13
ATG4D-209ENST00000588857 DEFB130BP0DP73 79 aa15.88■□□□□ 0.13
ATG4D-209ENST00000588857 DEFB130AP0DP74 79 aa15.88■□□□□ 0.13
ATG4D-209ENST00000588857 FAM222AQ5U5X8 452 aa15.88■□□□□ 0.13
ATG4D-209ENST00000588857 NRACQ8N912 160 aa15.88■□□□□ 0.13
ATG4D-209ENST00000588857 C5orf52A6NGY3 159 aa15.87■□□□□ 0.13
ATG4D-209ENST00000588857 MAP1LC3AQ9H492 121 aa15.87■□□□□ 0.13
ATG4D-209ENST00000588857 H7C1H1 209 aa15.87■□□□□ 0.13
ATG4D-209ENST00000588857 ZNF479Q96JC4 524 aa15.87■□□□□ 0.13
ATG4D-209ENST00000588857 LOC389332A0A1B0GUA5 103 aa15.86■□□□□ 0.13
ATG4D-209ENST00000588857 IGHV3-53P01767 116 aa15.86■□□□□ 0.13
ATG4D-209ENST00000588857 LINC00612Q8N6U2 182 aa15.86■□□□□ 0.13
ATG4D-209ENST00000588857 PRSS3P2Q8NHM4 247 aa15.86■□□□□ 0.13
ATG4D-209ENST00000588857 SPATA25Q9BR10 227 aa15.86■□□□□ 0.13
ATG4D-209ENST00000588857 DKK2Q9UBU2 259 aa15.86■□□□□ 0.13
ATG4D-209ENST00000588857 M0QY20 66 aa15.85■□□□□ 0.13
ATG4D-209ENST00000588857 CIDEAO60543 219 aa15.85■□□□□ 0.13
ATG4D-209ENST00000588857 SERF1AO75920 110 aa15.85■□□□□ 0.13
ATG4D-209ENST00000588857 RPL39LQ96EH5 51 aaKnown RBP15.85■□□□□ 0.13
ATG4D-209ENST00000588857 SPART-AS1P0CW21 52 aa15.84■□□□□ 0.13
ATG4D-209ENST00000588857 HOXA5P20719 270 aa15.84■□□□□ 0.13
ATG4D-209ENST00000588857 NIT1Q86X76 327 aa15.84■□□□□ 0.13
ATG4D-209ENST00000588857 RNASEKQ6P5S7 137 aaKnown RBP15.83■□□□□ 0.13
ATG4D-209ENST00000588857 C18orf15Q96N68 181 aa15.83■□□□□ 0.13
ATG4D-209ENST00000588857 C20orf78Q9BR46 151 aa15.83■□□□□ 0.12
ATG4D-209ENST00000588857 TM2D3Q9BRN9 247 aa15.83■□□□□ 0.12
ATG4D-209ENST00000588857 EDA2RQ9HAV5 297 aa15.83■□□□□ 0.12
ATG4D-209ENST00000588857 TEX48A0A1B0GUV7 120 aa15.82■□□□□ 0.12
ATG4D-209ENST00000588857 LINC00614P0C842 121 aa15.82■□□□□ 0.12
ATG4D-209ENST00000588857 IFI27P40305 119 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms