RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 PIK3CD-AS1Q5SR53 167 aa8.25□□□□□ -1.09
SMAD4-205ENST00000588745 RNASEKQ6P5S7 137 aaKnown RBP8.25□□□□□ -1.09
SMAD4-205ENST00000588745 KIR2DL5AQ8N109 375 aa8.25□□□□□ -1.09
SMAD4-205ENST00000588745 KIR2DL5BQ8NHK3 375 aa8.25□□□□□ -1.09
SMAD4-205ENST00000588745 TMEM18Q96B42 140 aa8.25□□□□□ -1.09
SMAD4-205ENST00000588745 C16orf74Q96GX8 76 aa8.25□□□□□ -1.09
SMAD4-205ENST00000588745 URB1-AS1Q96HZ7 61 aa8.25□□□□□ -1.09
SMAD4-205ENST00000588745 ZMAT5Q9UDW3 170 aaKnown RBP8.25□□□□□ -1.09
SMAD4-205ENST00000588745 A0A087WWL8 130 aa8.24□□□□□ -1.09
SMAD4-205ENST00000588745 TRAV26-2A0A0B4J265 109 aa8.24□□□□□ -1.09
SMAD4-205ENST00000588745 GAS8-AS1O95177 125 aa8.24□□□□□ -1.09
SMAD4-205ENST00000588745 TNFRSF6BO95407 300 aa8.24□□□□□ -1.09
SMAD4-205ENST00000588745 NIT1Q86X76 327 aa8.24□□□□□ -1.09
SMAD4-205ENST00000588745 CHCHD1Q96BP2 118 aaKnown RBP8.24□□□□□ -1.09
SMAD4-205ENST00000588745 NDUFAF3Q9BU61 184 aa8.24□□□□□ -1.09
SMAD4-205ENST00000588745 DNAH3Q8TD57 4116 aa8.24□□□□□ -1.09
SMAD4-205ENST00000588745 HSBP1O75506 76 aa8.23□□□□□ -1.09
SMAD4-205ENST00000588745 CRYGDP07320 174 aa8.23□□□□□ -1.09
SMAD4-205ENST00000588745 IGHV4-30-4P0DP06 118 aa8.23□□□□□ -1.09
SMAD4-205ENST00000588745 GATA1P15976 413 aaPredicted RBP8.23□□□□□ -1.09
SMAD4-205ENST00000588745 PMCHP20382 165 aa8.23□□□□□ -1.09
SMAD4-205ENST00000588745 RRN3P1Q2M238 152 aa8.23□□□□□ -1.09
SMAD4-205ENST00000588745 FAM74A4Q5TZK3 123 aa8.23□□□□□ -1.09
SMAD4-205ENST00000588745 NRACQ8N912 160 aa8.23□□□□□ -1.09
SMAD4-205ENST00000588745 PACRGQ96M98 296 aaPredicted RBP8.23□□□□□ -1.09
SMAD4-205ENST00000588745 SAMD10Q9BYL1 202 aa8.23□□□□□ -1.09
SMAD4-205ENST00000588745 MAP1LC3AQ9H492 121 aa8.23□□□□□ -1.09
SMAD4-205ENST00000588745 MRPL16Q9NX20 251 aaKnown RBP8.23□□□□□ -1.09
SMAD4-205ENST00000588745 A8MWV9 139 aa8.22□□□□□ -1.09
SMAD4-205ENST00000588745 G3V4G9 280 aa8.22□□□□□ -1.09
SMAD4-205ENST00000588745 AMTP48728 403 aa8.22□□□□□ -1.09
SMAD4-205ENST00000588745 ZNF56Q15929 161 aa8.22□□□□□ -1.09
SMAD4-205ENST00000588745 SAMD5Q5TGI4 173 aa8.22□□□□□ -1.09
SMAD4-205ENST00000588745 SUMO4Q6EEV6 95 aa8.22□□□□□ -1.09
SMAD4-205ENST00000588745 OR10D4PQ8NGN7 298 aa8.22□□□□□ -1.09
SMAD4-205ENST00000588745 MDFIQ99750 246 aa8.22□□□□□ -1.09
SMAD4-205ENST00000588745 LOC389332A0A1B0GUA5 103 aa8.22□□□□□ -1.09
SMAD4-205ENST00000588745 PLAC8L1A1L4L8 177 aa8.22□□□□□ -1.09
SMAD4-205ENST00000588745 LINC00614P0C842 121 aa8.22□□□□□ -1.09
SMAD4-205ENST00000588745 IFI27P40305 119 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-205ENST00000588745 DAZ2Q13117 558 aaKnown RBP8.22□□□□□ -1.09
SMAD4-205ENST00000588745 FA2HQ7L5A8 372 aa8.22□□□□□ -1.09
SMAD4-205ENST00000588745 PRSS3P2Q8NHM4 247 aa8.22□□□□□ -1.09
SMAD4-205ENST00000588745 RASL10AQ92737 203 aa8.22□□□□□ -1.09
SMAD4-205ENST00000588745 AP5S1Q9NUS5 200 aa8.22□□□□□ -1.09
SMAD4-205ENST00000588745 TRGV1A0A0A0MS02 117 aa8.21□□□□□ -1.1
SMAD4-205ENST00000588745 PRSS47A8MTI9 375 aa8.21□□□□□ -1.1
SMAD4-205ENST00000588745 F5H697 171 aa8.21□□□□□ -1.1
SMAD4-205ENST00000588745 RHODO00212 210 aa8.21□□□□□ -1.1
SMAD4-205ENST00000588745 RS1O15537 224 aa8.21□□□□□ -1.1
SMAD4-205ENST00000588745 PPP1R17O96001 155 aa8.21□□□□□ -1.1
SMAD4-205ENST00000588745 DEFB135Q30KP9 77 aa8.21□□□□□ -1.1
SMAD4-205ENST00000588745 LGALS9BQ3B8N2 356 aa8.21□□□□□ -1.1
SMAD4-205ENST00000588745 CFAP126Q5VTH2 177 aa8.21□□□□□ -1.1
SMAD4-205ENST00000588745 RPL39LQ96EH5 51 aaKnown RBP8.21□□□□□ -1.1
SMAD4-205ENST00000588745 X6R8D5 127 aa8.21□□□□□ -1.1
SMAD4-205ENST00000588745 IGHV1-24A0A0C4DH33 117 aa8.2□□□□□ -1.1
SMAD4-205ENST00000588745 SMIM9A6NGZ8 99 aa8.2□□□□□ -1.1
SMAD4-205ENST00000588745 A8MZ25 164 aa8.2□□□□□ -1.1
SMAD4-205ENST00000588745 UFSP1Q6NVU6 142 aa8.2□□□□□ -1.1
SMAD4-205ENST00000588745 FAM19A2Q8N3H0 131 aa8.2□□□□□ -1.1
SMAD4-205ENST00000588745 C20orf78Q9BR46 151 aa8.2□□□□□ -1.1
SMAD4-205ENST00000588745 EDA2RQ9HAV5 297 aa8.2□□□□□ -1.1
SMAD4-205ENST00000588745 NOP10Q9NPE3 64 aaKnown RBP8.2□□□□□ -1.1
SMAD4-205ENST00000588745 NXT2Q9NPJ8 142 aaKnown RBP8.2□□□□□ -1.1
SMAD4-205ENST00000588745 LINC01546A6NGU7 62 aa8.19□□□□□ -1.1
SMAD4-205ENST00000588745 SUMO2P61956 95 aaKnown RBP8.19□□□□□ -1.1
SMAD4-205ENST00000588745 Q6ZTI0 123 aa8.19□□□□□ -1.1
SMAD4-205ENST00000588745 Q8N8P6 123 aa8.19□□□□□ -1.1
SMAD4-205ENST00000588745 OVOL2Q9BRP0 275 aa8.19□□□□□ -1.1
SMAD4-205ENST00000588745 SMIM2Q9BVW6 85 aa8.19□□□□□ -1.1
SMAD4-205ENST00000588745 NACAE9PAV3 2078 aa8.19□□□□□ -1.1
SMAD4-205ENST00000588745 IGLV2-18A0A075B6J9 118 aa8.18□□□□□ -1.1
SMAD4-205ENST00000588745 IGHV3-73A0A0B4J1V6 119 aa8.18□□□□□ -1.1
SMAD4-205ENST00000588745 M0QY20 66 aa8.18□□□□□ -1.1
SMAD4-205ENST00000588745 SMIM6P0DI80 62 aa8.18□□□□□ -1.1
SMAD4-205ENST00000588745 PMCHL1Q16048 86 aa8.18□□□□□ -1.1
SMAD4-205ENST00000588745 ZFP2Q6ZN57 461 aa8.18□□□□□ -1.1
SMAD4-205ENST00000588745 PKD1L1Q8TDX9 2849 aa8.17□□□□□ -1.1
SMAD4-205ENST00000588745 TRAV4A0A0B4J268 109 aa8.17□□□□□ -1.1
SMAD4-205ENST00000588745 TRBV6-5A0A0K0K1A5 114 aa8.17□□□□□ -1.1
SMAD4-205ENST00000588745 H7C1H1 209 aa8.17□□□□□ -1.1
SMAD4-205ENST00000588745 RPL32P62910 135 aaKnown RBP8.17□□□□□ -1.1
SMAD4-205ENST00000588745 Q6ZWC4 215 aa8.17□□□□□ -1.1
SMAD4-205ENST00000588745 OR4C5Q8NGB2 326 aa8.17□□□□□ -1.1
SMAD4-205ENST00000588745 RNF183Q96D59 192 aa8.17□□□□□ -1.1
SMAD4-205ENST00000588745 ST20Q9HBF5 79 aa8.17□□□□□ -1.1
SMAD4-205ENST00000588745 A0A096LNJ9 63 aa8.16□□□□□ -1.1
SMAD4-205ENST00000588745 PYY3Q5JQD4 70 aa8.16□□□□□ -1.1
SMAD4-205ENST00000588745 LURAP1LQ8IV03 231 aa8.16□□□□□ -1.1
SMAD4-205ENST00000588745 OR11H2Q8NH07 326 aa8.16□□□□□ -1.1
SMAD4-205ENST00000588745 GAGE12BA1L429 117 aa8.15□□□□□ -1.1
SMAD4-205ENST00000588745 GAGE7O76087 117 aa8.15□□□□□ -1.1
SMAD4-205ENST00000588745 LEPROTL1O95214 131 aa8.15□□□□□ -1.1
SMAD4-205ENST00000588745 IGHV3-53P01767 116 aa8.15□□□□□ -1.1
SMAD4-205ENST00000588745 HBDP02042 147 aa8.15□□□□□ -1.1
SMAD4-205ENST00000588745 GAGE12FP0CL80 117 aa8.15□□□□□ -1.1
SMAD4-205ENST00000588745 GAGE12GP0CL81 117 aa8.15□□□□□ -1.1
SMAD4-205ENST00000588745 GAGE12IP0CL82 117 aa8.15□□□□□ -1.1
SMAD4-205ENST00000588745 EMP1P54849 157 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms