RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 GAGE13Q4V321 117 aa10.12□□□□□ -0.79
ATG4D-207ENST00000587256 SPANXN1Q5VSR9 72 aa10.12□□□□□ -0.79
ATG4D-207ENST00000587256 OR2D3Q8NGH3 330 aa10.12□□□□□ -0.79
ATG4D-207ENST00000587256 ATP6V0E2Q8NHE4 81 aa10.12□□□□□ -0.79
ATG4D-207ENST00000587256 BIN3Q9NQY0 253 aa10.12□□□□□ -0.79
ATG4D-207ENST00000587256 TRAV9-2A0A087WT02 112 aa10.11□□□□□ -0.79
ATG4D-207ENST00000587256 TRAV8-6A0A0B4J262 113 aa10.11□□□□□ -0.79
ATG4D-207ENST00000587256 MUC21A0A0G2JKD1 596 aa10.11□□□□□ -0.79
ATG4D-207ENST00000587256 MUC21A0A140T8X8 626 aa10.11□□□□□ -0.79
ATG4D-207ENST00000587256 RBFOX3A6NFN3 312 aa10.11□□□□□ -0.79
ATG4D-207ENST00000587256 SNAI2O43623 268 aa10.11□□□□□ -0.79
ATG4D-207ENST00000587256 P01737 135 aa10.11□□□□□ -0.79
ATG4D-207ENST00000587256 OR5AL1P0C617 328 aa10.11□□□□□ -0.79
ATG4D-207ENST00000587256 BTF3P20290 206 aaKnown RBP10.11□□□□□ -0.79
ATG4D-207ENST00000587256 EVI2AP22794 236 aa10.11□□□□□ -0.79
ATG4D-207ENST00000587256 RPS20P60866 119 aaKnown RBP10.11□□□□□ -0.79
ATG4D-207ENST00000587256 OR10J3Q5JRS4 329 aa10.11□□□□□ -0.79
ATG4D-207ENST00000587256 C14orf178Q8N769 122 aaPredicted RBP10.11□□□□□ -0.79
ATG4D-207ENST00000587256 TPPP3Q9BW30 176 aa10.11□□□□□ -0.79
ATG4D-207ENST00000587256 CRYGDP07320 174 aa10.1□□□□□ -0.79
ATG4D-207ENST00000587256 SSTP61278 116 aa10.1□□□□□ -0.79
ATG4D-207ENST00000587256 ZNF56Q15929 161 aa10.1□□□□□ -0.79
ATG4D-207ENST00000587256 TOR2AQ5JU69 321 aa10.1□□□□□ -0.79
ATG4D-207ENST00000587256 GTSF1LQ9H1H1 148 aa10.1□□□□□ -0.79
ATG4D-207ENST00000587256 XKRY2A2RUG3 117 aa10.09□□□□□ -0.79
ATG4D-207ENST00000587256 C19orf71A6NCJ1 209 aa10.09□□□□□ -0.79
ATG4D-207ENST00000587256 TMEM250H0YL14 139 aa10.09□□□□□ -0.79
ATG4D-207ENST00000587256 DNAH10OSP0CZ25 163 aa10.09□□□□□ -0.79
ATG4D-207ENST00000587256 LINC00694P0DN24 101 aa10.09□□□□□ -0.79
ATG4D-207ENST00000587256 GZMBP10144 247 aa10.09□□□□□ -0.79
ATG4D-207ENST00000587256 CEBPGP53567 150 aa10.09□□□□□ -0.79
ATG4D-207ENST00000587256 FER1L6-AS1Q8NA97 138 aa10.09□□□□□ -0.79
ATG4D-207ENST00000587256 LYPD6BQ8NI32 183 aa10.09□□□□□ -0.79
ATG4D-207ENST00000587256 AP1S3Q96PC3 154 aa10.09□□□□□ -0.79
ATG4D-207ENST00000587256 SSBP4Q9BWG4 385 aaPredicted RBP10.09□□□□□ -0.79
ATG4D-207ENST00000587256 PKHD1P08F94 4074 aa10.09□□□□□ -0.79
ATG4D-207ENST00000587256 IGHV3-38A0A0C4DH36 116 aa10.08□□□□□ -0.8
ATG4D-207ENST00000587256 LELP1Q5T871 98 aa10.08□□□□□ -0.8
ATG4D-207ENST00000587256 C10orf126Q8N4M7 172 aa10.08□□□□□ -0.8
ATG4D-207ENST00000587256 EIF5A2Q9GZV4 153 aaKnown RBP10.08□□□□□ -0.8
ATG4D-207ENST00000587256 DNAH11Q96DT5 4516 aa10.08□□□□□ -0.8
ATG4D-207ENST00000587256 PKD1P98161 4303 aa10.08□□□□□ -0.8
ATG4D-207ENST00000587256 K7EP13 123 aa10.07□□□□□ -0.8
ATG4D-207ENST00000587256 IGLC6P0CF74 106 aa10.07□□□□□ -0.8
ATG4D-207ENST00000587256 SMIM17P0DL12 118 aa10.07□□□□□ -0.8
ATG4D-207ENST00000587256 TRBV10-1A0A0K0K1A3 114 aa10.06□□□□□ -0.8
ATG4D-207ENST00000587256 F5H697 171 aa10.06□□□□□ -0.8
ATG4D-207ENST00000587256 RAB4BP61018 213 aa10.06□□□□□ -0.8
ATG4D-207ENST00000587256 RPL36AP83881 106 aaKnown RBP10.06□□□□□ -0.8
ATG4D-207ENST00000587256 NFE4Q86UQ8 179 aa10.06□□□□□ -0.8
ATG4D-207ENST00000587256 RPL36ALQ969Q0 106 aaKnown RBP10.06□□□□□ -0.8
ATG4D-207ENST00000587256 MSRB1Q9NZV6 116 aa10.06□□□□□ -0.8
ATG4D-207ENST00000587256 Q9UF83 564 aa10.06□□□□□ -0.8
ATG4D-207ENST00000587256 DYNC1H1Q14204 4646 aaKnown RBP10.05□□□□□ -0.8
ATG4D-207ENST00000587256 K7EN84 100 aa10.05□□□□□ -0.8
ATG4D-207ENST00000587256 CACNG7P62955 275 aa10.05□□□□□ -0.8
ATG4D-207ENST00000587256 LINC01556Q5JQF7 62 aa10.05□□□□□ -0.8
ATG4D-207ENST00000587256 NUDT10Q8NFP7 164 aa10.05□□□□□ -0.8
ATG4D-207ENST00000587256 OCC1Q8TAD7 63 aa10.05□□□□□ -0.8
ATG4D-207ENST00000587256 NUDT11Q96G61 164 aa10.05□□□□□ -0.8
ATG4D-207ENST00000587256 FAM210AQ96ND0 272 aa10.05□□□□□ -0.8
ATG4D-207ENST00000587256 RPP21Q9H633 154 aaKnown RBP10.05□□□□□ -0.8
ATG4D-207ENST00000587256 A0A087WWC5 75 aa10.04□□□□□ -0.8
ATG4D-207ENST00000587256 IGHV3-30P01768 117 aa10.04□□□□□ -0.8
ATG4D-207ENST00000587256 IGHV3-33P01772 117 aa10.04□□□□□ -0.8
ATG4D-207ENST00000587256 IGHV3-30-3P0DP02 117 aa10.04□□□□□ -0.8
ATG4D-207ENST00000587256 IGHV3-30-5P0DP03 117 aa10.04□□□□□ -0.8
ATG4D-207ENST00000587256 Q6ZRN7 208 aaPredicted RBP10.04□□□□□ -0.8
ATG4D-207ENST00000587256 RNASE7Q9H1E1 156 aaKnown RBP10.04□□□□□ -0.8
ATG4D-207ENST00000587256 TNFRSF18Q9Y5U5 241 aa10.04□□□□□ -0.8
ATG4D-207ENST00000587256 F2Z2F3 143 aa10.03□□□□□ -0.8
ATG4D-207ENST00000587256 MGPP08493 103 aa10.03□□□□□ -0.8
ATG4D-207ENST00000587256 LYZL1Q6UWQ5 148 aa10.03□□□□□ -0.8
ATG4D-207ENST00000587256 SMIM7Q9BQ49 75 aa10.03□□□□□ -0.8
ATG4D-207ENST00000587256 TRBV7-3A0A075B6L6 115 aa10.02□□□□□ -0.81
ATG4D-207ENST00000587256 C16orf90A8MZG2 172 aa10.02□□□□□ -0.81
ATG4D-207ENST00000587256 CTRLP40313 264 aa10.02□□□□□ -0.81
ATG4D-207ENST00000587256 ERVFC1-1P60608 527 aa10.02□□□□□ -0.81
ATG4D-207ENST00000587256 OR10G8Q8NGN5 311 aa10.02□□□□□ -0.81
ATG4D-207ENST00000587256 KIAA1109Q2LD37 5005 aa10.02□□□□□ -0.81
ATG4D-207ENST00000587256 TRGC1P0CF51 173 aa10.01□□□□□ -0.81
ATG4D-207ENST00000587256 UBE2D3P61077 147 aa10.01□□□□□ -0.81
ATG4D-207ENST00000587256 UBE2D2P62837 147 aa10.01□□□□□ -0.81
ATG4D-207ENST00000587256 TEX261Q6UWH6 196 aa10.01□□□□□ -0.81
ATG4D-207ENST00000587256 SPATA12Q7Z6I5 190 aa10.01□□□□□ -0.81
ATG4D-207ENST00000587256 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.01□□□□□ -0.81
ATG4D-207ENST00000587256 NEXN-AS1Q8NBZ9 246 aa10.01□□□□□ -0.81
ATG4D-207ENST00000587256 Q9HAA7 133 aa10.01□□□□□ -0.81
ATG4D-207ENST00000587256 KIF25-AS1Q9Y6Z4 181 aa10.01□□□□□ -0.81
ATG4D-207ENST00000587256 ZNF727A8MUV8 499 aa10□□□□□ -0.81
ATG4D-207ENST00000587256 EREGO14944 169 aa10□□□□□ -0.81
ATG4D-207ENST00000587256 GATCO43716 136 aaKnown RBP10□□□□□ -0.81
ATG4D-207ENST00000587256 NDUFS6O75380 124 aaKnown RBP10□□□□□ -0.81
ATG4D-207ENST00000587256 SRP19P09132 144 aaKnown RBP10□□□□□ -0.81
ATG4D-207ENST00000587256 Q8N3U1 123 aa10□□□□□ -0.81
ATG4D-207ENST00000587256 URGCP-MRPS24S4R325 110 aa10□□□□□ -0.81
ATG4D-207ENST00000587256 HERC2O95714 4834 aa9.99□□□□□ -0.81
ATG4D-207ENST00000587256 IBA57-AS1B1ANH7 110 aa9.99□□□□□ -0.81
ATG4D-207ENST00000587256 H7C1H1 209 aa9.99□□□□□ -0.81
ATG4D-207ENST00000587256 PSCAO43653 123 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms