RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 LYZL2Q7Z4W2 148 aa3.43□□□□□ -1.86
ZNF540-204ENST00000586792 SBSPONQ8IVN8 264 aa3.43□□□□□ -1.86
ZNF540-204ENST00000586792 C1orf158Q8N1D5 194 aa3.43□□□□□ -1.86
ZNF540-204ENST00000586792 OR10G4Q8NGN3 311 aa3.43□□□□□ -1.86
ZNF540-204ENST00000586792 ZNRF2Q8NHG8 242 aa3.43□□□□□ -1.86
ZNF540-204ENST00000586792 HIST1H2BHQ93079 126 aa3.43□□□□□ -1.86
ZNF540-204ENST00000586792 YPEL4Q96NS1 127 aa3.43□□□□□ -1.86
ZNF540-204ENST00000586792 METTL26Q96S19 204 aa3.43□□□□□ -1.86
ZNF540-204ENST00000586792 HIST1H2BNQ99877 126 aa3.43□□□□□ -1.86
ZNF540-204ENST00000586792 HIST1H2BMQ99879 126 aa3.43□□□□□ -1.86
ZNF540-204ENST00000586792 LAMTOR2Q9Y2Q5 125 aa3.43□□□□□ -1.86
ZNF540-204ENST00000586792 LOC102724200A0A096LPH7 203 aaPredicted RBP3.42□□□□□ -1.86
ZNF540-204ENST00000586792 IGHV3-49A0A0A0MS15 119 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 A0A1W2PRE2 83 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 ZFP92A6NM28 416 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 NDUFB6O95139 128 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 SIX6O95475 246 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 SFT2D2O95562 160 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 CD7P09564 240 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 P0C879 139 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 SLC25A6P12236 298 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 NPPCP23582 126 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 S100A7P31151 101 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 H2BFSP57053 126 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 SUPT4H1P63272 117 aaKnown RBP3.42□□□□□ -1.86
ZNF540-204ENST00000586792 HIST1H1AQ02539 215 aaPredicted RBP3.42□□□□□ -1.86
ZNF540-204ENST00000586792 HSD52Q0P140 79 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 DHRS2Q13268 280 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 PMAIP1Q13794 54 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 PMCHL1Q16048 86 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 C2orf83Q53S99 150 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 NMSQ5H8A3 153 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 PSMG4Q5JS54 123 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 FOXI2Q6ZQN5 318 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 NEGR1Q7Z3B1 354 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 DEFB125Q8N687 156 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 MBD3L1Q8WWY6 194 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 FAM218AQ96MZ4 157 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 VAMP8Q9BV40 100 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 RHPN1-AS1Q9BWJ2 59 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 GGTLC1Q9BX51 225 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 SH3BGRL3Q9H299 93 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 PARLQ9H300 379 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 NAT8BQ9UHF3 227 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 CYSLTR1Q9Y271 337 aa3.42□□□□□ -1.86
ZNF540-204ENST00000586792 NOTCH1P46531 2555 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 IGHV3OR16-12A0A075B7B8 117 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 IGHV3OR16-13A0A075B7E8 117 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 IGHV3-74A0A0B4J1X5 117 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 IGHV3-66A0A0C4DH42 116 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 ZNF705GA8MUZ8 300 aaPredicted RBP3.41□□□□□ -1.86
ZNF540-204ENST00000586792 SYNGR2O43760 224 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 IL4P05112 153 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 IAPPP10997 89 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 SEC11AP67812 179 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 AKR1C1Q04828 323 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 SPANXN5Q5MJ07 72 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 FAM162BQ5T6X4 162 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 SCGB1D4Q6XE38 83 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 FER1L6-AS1Q8NA97 138 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 OR2G3Q8NGZ4 309 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 FMC1Q96HJ9 113 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 TM2D3Q9BRN9 247 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 PYGO2Q9BRQ0 406 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 WFDC10AQ9H1F0 79 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 SLC35B3Q9H1N7 401 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 TNFSF18Q9UNG2 199 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 PSG8Q9UQ74 426 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 DNAH9Q9NYC9 4486 aa3.41□□□□□ -1.86
ZNF540-204ENST00000586792 TRAV8-6A0A0B4J262 113 aa3.4□□□□□ -1.87
ZNF540-204ENST00000586792 IGHV3OR16-9A0A0B4J2B5 98 aa3.4□□□□□ -1.87
ZNF540-204ENST00000586792 PRAC2D3DTV9 90 aa3.4□□□□□ -1.87
ZNF540-204ENST00000586792 C3orf84H3BNL1 204 aa3.4□□□□□ -1.87
ZNF540-204ENST00000586792 H3BP45 60 aa3.4□□□□□ -1.87
ZNF540-204ENST00000586792 SSSCA1O60232 199 aa3.4□□□□□ -1.87
ZNF540-204ENST00000586792 NDUFC2O95298 119 aa3.4□□□□□ -1.87
ZNF540-204ENST00000586792 PFN1P07737 140 aaKnown RBP3.4□□□□□ -1.87
ZNF540-204ENST00000586792 IGLC1P0CG04 106 aa3.4□□□□□ -1.87
ZNF540-204ENST00000586792 CXCL3P19876 107 aa3.4□□□□□ -1.87
ZNF540-204ENST00000586792 EMP1P54849 157 aa3.4□□□□□ -1.87
ZNF540-204ENST00000586792 S100A10P60903 97 aa3.4□□□□□ -1.87
ZNF540-204ENST00000586792 YPEL3P61236 119 aaPredicted RBP3.4□□□□□ -1.87
ZNF540-204ENST00000586792 DAD1P61803 113 aa3.4□□□□□ -1.87
ZNF540-204ENST00000586792 SNRPD3P62318 126 aaKnown RBP3.4□□□□□ -1.87
ZNF540-204ENST00000586792 GOLT1AQ6ZVE7 132 aa3.4□□□□□ -1.87
ZNF540-204ENST00000586792 KRTAP7-1Q8IUC3 87 aa3.4□□□□□ -1.87
ZNF540-204ENST00000586792 PMCHL2Q9BQD1 86 aa3.4□□□□□ -1.87
ZNF540-204ENST00000586792 DNAH3Q8TD57 4116 aa3.39□□□□□ -1.87
ZNF540-204ENST00000586792 TNCP24821 2201 aa3.39□□□□□ -1.87
ZNF540-204ENST00000586792 TRAV9-1A0A075B6T8 112 aa3.39□□□□□ -1.87
ZNF540-204ENST00000586792 FXYD6-FXYD2A0A087WZ82 144 aa3.39□□□□□ -1.87
ZNF540-204ENST00000586792 TRAV2A0A0B4J234 112 aa3.39□□□□□ -1.87
ZNF540-204ENST00000586792 TMEM262E9PQX1 116 aa3.39□□□□□ -1.87
ZNF540-204ENST00000586792 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.39□□□□□ -1.87
ZNF540-204ENST00000586792 J3KT08 172 aa3.39□□□□□ -1.87
ZNF540-204ENST00000586792 K7EQD1 137 aa3.39□□□□□ -1.87
ZNF540-204ENST00000586792 M0R2Z0 102 aa3.39□□□□□ -1.87
ZNF540-204ENST00000586792 AGPAT2O15120 278 aa3.39□□□□□ -1.87
ZNF540-204ENST00000586792 PITX3O75364 302 aa3.39□□□□□ -1.87
ZNF540-204ENST00000586792 SEC11BP0C7V7 166 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms