RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 RAB19A4D1S5 217 aa9.15□□□□□ -0.94
SS18-222ENST00000582792 KRBOX1C9JBD0 128 aa9.15□□□□□ -0.94
SS18-222ENST00000582792 EVI2AP22794 236 aa9.15□□□□□ -0.94
SS18-222ENST00000582792 PTH2Q96A98 100 aa9.15□□□□□ -0.94
SS18-222ENST00000582792 TRBV20OR9-2A0A075B6H5 130 aa9.14□□□□□ -0.95
SS18-222ENST00000582792 B4DEV8 164 aa9.14□□□□□ -0.95
SS18-222ENST00000582792 K7EQD1 137 aa9.14□□□□□ -0.95
SS18-222ENST00000582792 GNRH2O43555 120 aa9.14□□□□□ -0.95
SS18-222ENST00000582792 ORM1P02763 201 aa9.14□□□□□ -0.95
SS18-222ENST00000582792 SRIP30626 198 aa9.14□□□□□ -0.95
SS18-222ENST00000582792 HAMPP81172 84 aa9.14□□□□□ -0.95
SS18-222ENST00000582792 FAM74A3Q4VXF1 159 aa9.14□□□□□ -0.95
SS18-222ENST00000582792 NHLRC2Q8NBF2 726 aa9.14□□□□□ -0.95
SS18-222ENST00000582792 TMEM70Q9BUB7 260 aa9.14□□□□□ -0.95
SS18-222ENST00000582792 TRGV4A0A0C4DH28 118 aa9.13□□□□□ -0.95
SS18-222ENST00000582792 C19orf71A6NCJ1 209 aa9.13□□□□□ -0.95
SS18-222ENST00000582792 PIK3CD-AS1Q5SR53 167 aa9.13□□□□□ -0.95
SS18-222ENST00000582792 RASL10AQ92737 203 aa9.13□□□□□ -0.95
SS18-222ENST00000582792 C9orf85Q96MD7 179 aa9.13□□□□□ -0.95
SS18-222ENST00000582792 IGLV5-52A0A0A0MRZ9 124 aa9.12□□□□□ -0.95
SS18-222ENST00000582792 J3QL48 77 aa9.12□□□□□ -0.95
SS18-222ENST00000582792 M0R2P5 195 aa9.12□□□□□ -0.95
SS18-222ENST00000582792 ASIPP42127 132 aa9.12□□□□□ -0.95
SS18-222ENST00000582792 C10orf126Q8N4M7 172 aa9.12□□□□□ -0.95
SS18-222ENST00000582792 NTN5Q8WTR8 489 aaPredicted RBP9.12□□□□□ -0.95
SS18-222ENST00000582792 DAZAP1Q96EP5 407 aaKnown RBP9.12□□□□□ -0.95
SS18-222ENST00000582792 SMIM7Q9BQ49 75 aa9.12□□□□□ -0.95
SS18-222ENST00000582792 IL36BQ9NZH7 164 aa9.12□□□□□ -0.95
SS18-222ENST00000582792 LRCOL1A6NCL2 159 aa9.11□□□□□ -0.95
SS18-222ENST00000582792 CRYGDP07320 174 aa9.11□□□□□ -0.95
SS18-222ENST00000582792 SFTA3P0C7M3 94 aa9.11□□□□□ -0.95
SS18-222ENST00000582792 MGST1P10620 155 aaKnown RBP9.11□□□□□ -0.95
SS18-222ENST00000582792 RNASE3P12724 160 aaKnown RBP9.11□□□□□ -0.95
SS18-222ENST00000582792 GYPEP15421 78 aa9.11□□□□□ -0.95
SS18-222ENST00000582792 S100A4P26447 101 aaKnown RBP9.11□□□□□ -0.95
SS18-222ENST00000582792 RPS20P60866 119 aaKnown RBP9.11□□□□□ -0.95
SS18-222ENST00000582792 OCC1Q8TAD7 63 aa9.11□□□□□ -0.95
SS18-222ENST00000582792 ZNF479Q96JC4 524 aa9.11□□□□□ -0.95
SS18-222ENST00000582792 ZNF727A8MUV8 499 aa9.1□□□□□ -0.95
SS18-222ENST00000582792 C9JQL5 133 aa9.1□□□□□ -0.95
SS18-222ENST00000582792 SRSF3P84103 164 aaKnown RBP9.1□□□□□ -0.95
SS18-222ENST00000582792 PRR27Q6MZM9 219 aa9.1□□□□□ -0.95
SS18-222ENST00000582792 DNAH8Q96JB1 4490 aa9.1□□□□□ -0.95
SS18-222ENST00000582792 XKRY2A2RUG3 117 aa9.09□□□□□ -0.95
SS18-222ENST00000582792 PGPEP1LA6NFU8 196 aa9.09□□□□□ -0.95
SS18-222ENST00000582792 K7EN84 100 aa9.09□□□□□ -0.95
SS18-222ENST00000582792 M0R036 132 aa9.09□□□□□ -0.95
SS18-222ENST00000582792 PSCAO43653 123 aa9.09□□□□□ -0.95
SS18-222ENST00000582792 CIDEAO60543 219 aa9.09□□□□□ -0.95
SS18-222ENST00000582792 P01737 135 aa9.09□□□□□ -0.95
SS18-222ENST00000582792 CEBPGP53567 150 aa9.09□□□□□ -0.95
SS18-222ENST00000582792 FAM231DQ6ZW35 169 aa9.09□□□□□ -0.95
SS18-222ENST00000582792 TMEM241Q24JQ0 296 aa9.08□□□□□ -0.96
SS18-222ENST00000582792 UQCC3Q6UW78 93 aa9.08□□□□□ -0.96
SS18-222ENST00000582792 LINC01551Q86U37 167 aa9.08□□□□□ -0.96
SS18-222ENST00000582792 Q8N814 137 aa9.08□□□□□ -0.96
SS18-222ENST00000582792 NUDT10Q8NFP7 164 aa9.08□□□□□ -0.96
SS18-222ENST00000582792 NUDT11Q96G61 164 aa9.08□□□□□ -0.96
SS18-222ENST00000582792 SSBP4Q9BWG4 385 aaPredicted RBP9.08□□□□□ -0.96
SS18-222ENST00000582792 TRAV4A0A0B4J268 109 aa9.07□□□□□ -0.96
SS18-222ENST00000582792 IGHV3-38A0A0C4DH36 116 aa9.07□□□□□ -0.96
SS18-222ENST00000582792 SNAI2O43623 268 aa9.07□□□□□ -0.96
SS18-222ENST00000582792 OR5AL1P0C617 328 aa9.07□□□□□ -0.96
SS18-222ENST00000582792 ARMS2P0C7Q2 107 aa9.07□□□□□ -0.96
SS18-222ENST00000582792 ZNF876PQ49A33 203 aa9.07□□□□□ -0.96
SS18-222ENST00000582792 SYT8Q8NBV8 401 aa9.07□□□□□ -0.96
SS18-222ENST00000582792 OR2D3Q8NGH3 330 aa9.07□□□□□ -0.96
SS18-222ENST00000582792 FAM30AQ9NZY2 134 aa9.07□□□□□ -0.96
SS18-222ENST00000582792 NAT8Q9UHE5 227 aa9.07□□□□□ -0.96
SS18-222ENST00000582792 TMSB15BA0A087X1C1 80 aa9.06□□□□□ -0.96
SS18-222ENST00000582792 GRIFINA4D1Z8 144 aa9.06□□□□□ -0.96
SS18-222ENST00000582792 LINC00862A6NCI5 91 aa9.06□□□□□ -0.96
SS18-222ENST00000582792 KRTAP29-1A8MX34 341 aaPredicted RBP9.06□□□□□ -0.96
SS18-222ENST00000582792 IBA57-AS1B1ANH7 110 aa9.06□□□□□ -0.96
SS18-222ENST00000582792 H3BVH4 76 aa9.06□□□□□ -0.96
SS18-222ENST00000582792 RS1O15537 224 aa9.06□□□□□ -0.96
SS18-222ENST00000582792 TIRAPP58753 221 aa9.06□□□□□ -0.96
SS18-222ENST00000582792 RPL19P84098 196 aaKnown RBP9.06□□□□□ -0.96
SS18-222ENST00000582792 CT83Q5H943 113 aa9.06□□□□□ -0.96
SS18-222ENST00000582792 LINC01556Q5JQF7 62 aa9.06□□□□□ -0.96
SS18-222ENST00000582792 SH2D6Q7Z4S9 175 aa9.06□□□□□ -0.96
SS18-222ENST00000582792 OSTCQ9NRP0 149 aa9.06□□□□□ -0.96
SS18-222ENST00000582792 LOC100131303A0A0U1RQF7 123 aa9.05□□□□□ -0.96
SS18-222ENST00000582792 A8MWV9 139 aa9.05□□□□□ -0.96
SS18-222ENST00000582792 IGLC6P0CF74 106 aa9.05□□□□□ -0.96
SS18-222ENST00000582792 WDR73Q6P4I2 378 aa9.05□□□□□ -0.96
SS18-222ENST00000582792 ZFP82Q8N141 532 aa9.05□□□□□ -0.96
SS18-222ENST00000582792 RPP21Q9H633 154 aaKnown RBP9.05□□□□□ -0.96
SS18-222ENST00000582792 PHLDA3Q9Y5J5 127 aa9.05□□□□□ -0.96
SS18-222ENST00000582792 HMCN2Q8NDA2 5059 aa9.05□□□□□ -0.96
SS18-222ENST00000582792 F2Z2F3 143 aa9.04□□□□□ -0.96
SS18-222ENST00000582792 GATCO43716 136 aaKnown RBP9.04□□□□□ -0.96
SS18-222ENST00000582792 PLA2G1BP04054 148 aaKnown RBP9.04□□□□□ -0.96
SS18-222ENST00000582792 RPL23P62829 140 aaKnown RBP9.04□□□□□ -0.96
SS18-222ENST00000582792 OR4C5Q8NGB2 326 aa9.04□□□□□ -0.96
SS18-222ENST00000582792 ISOC2Q96AB3 205 aa9.04□□□□□ -0.96
SS18-222ENST00000582792 RNASE7Q9H1E1 156 aaKnown RBP9.04□□□□□ -0.96
SS18-222ENST00000582792 FAM231BA6NCW3 169 aa9.03□□□□□ -0.96
SS18-222ENST00000582792 A8MWL6 223 aa9.03□□□□□ -0.96
SS18-222ENST00000582792 CFAP126Q5VTH2 177 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms