RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-217	ENST00000580583	C14orf144	Q96I85	54 aa		4.65	□□□□□ -1.67
PPP4R1-217	ENST00000580583	MIEN1	Q9BRT3	115 aa		4.65	□□□□□ -1.67
PPP4R1-217	ENST00000580583	LINC00467	Q9BRT7	94 aa		4.65	□□□□□ -1.67
PPP4R1-217	ENST00000580583	ST20	Q9HBF5	79 aa		4.65	□□□□□ -1.67
PPP4R1-217	ENST00000580583	UQCR10	Q9UDW1	63 aa		4.65	□□□□□ -1.67
PPP4R1-217	ENST00000580583	KIF25-AS1	Q9Y6Z4	181 aa		4.65	□□□□□ -1.67
PPP4R1-217	ENST00000580583		A0A087WWL8	130 aa		4.64	□□□□□ -1.67
PPP4R1-217	ENST00000580583	HSBP1L1	C9JCN9	74 aa		4.64	□□□□□ -1.67
PPP4R1-217	ENST00000580583	IGLV1-51	P01701	117 aa		4.64	□□□□□ -1.67
PPP4R1-217	ENST00000580583	CMC4	P56277	68 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R1-217	ENST00000580583	LINC00315	P59091	139 aa		4.64	□□□□□ -1.67
PPP4R1-217	ENST00000580583	RPL32	P62910	135 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R1-217	ENST00000580583	LAGE3	Q14657	143 aa		4.64	□□□□□ -1.67
PPP4R1-217	ENST00000580583	ZNF56	Q15929	161 aa		4.64	□□□□□ -1.67
PPP4R1-217	ENST00000580583	NSUN5P1	Q3KNT7	163 aa		4.64	□□□□□ -1.67
PPP4R1-217	ENST00000580583	ORMDL2	Q53FV1	153 aa		4.64	□□□□□ -1.67
PPP4R1-217	ENST00000580583	TRPT1	Q86TN4	253 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R1-217	ENST00000580583	MRPL52	Q86TS9	123 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R1-217	ENST00000580583	TMEM158	Q8WZ71	300 aa		4.64	□□□□□ -1.67
PPP4R1-217	ENST00000580583	IFI27L1	Q96BM0	104 aa		4.64	□□□□□ -1.67
PPP4R1-217	ENST00000580583	MDFIC	Q9P1T7	246 aa		4.64	□□□□□ -1.67
PPP4R1-217	ENST00000580583	TCAP	O15273	167 aa		4.63	□□□□□ -1.67
PPP4R1-217	ENST00000580583	ATP5L	O75964	103 aa		4.63	□□□□□ -1.67
PPP4R1-217	ENST00000580583	NUDT3	O95989	172 aa		4.63	□□□□□ -1.67
PPP4R1-217	ENST00000580583	PF4	P02776	101 aa		4.63	□□□□□ -1.67
PPP4R1-217	ENST00000580583	IGLC3	P0DOY3	106 aa		4.63	□□□□□ -1.67
PPP4R1-217	ENST00000580583	HNRNPA3	P51991	378 aa	Known RBP	4.63	□□□□□ -1.67
PPP4R1-217	ENST00000580583	LGALS9B	Q3B8N2	356 aa		4.63	□□□□□ -1.67
PPP4R1-217	ENST00000580583	MAJIN	Q3KP22	176 aa		4.63	□□□□□ -1.67
PPP4R1-217	ENST00000580583	FAM74A4	Q5TZK3	123 aa		4.63	□□□□□ -1.67
PPP4R1-217	ENST00000580583	LGALS9C	Q6DKI2	356 aa		4.63	□□□□□ -1.67
PPP4R1-217	ENST00000580583	STH	Q8IWL8	128 aa		4.63	□□□□□ -1.67
PPP4R1-217	ENST00000580583	C18orf15	Q96N68	181 aa		4.63	□□□□□ -1.67
PPP4R1-217	ENST00000580583	FAM110A	Q9BQ89	295 aa		4.63	□□□□□ -1.67
PPP4R1-217	ENST00000580583	PMCHL2	Q9BQD1	86 aa		4.63	□□□□□ -1.67
PPP4R1-217	ENST00000580583	GOLT1B	Q9Y3E0	138 aa		4.63	□□□□□ -1.67
PPP4R1-217	ENST00000580583	AKAP9	Q99996	3911 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	TRBV6-5	A0A0K0K1A5	114 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	hDV102S1	A0JD36	115 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583		F5H697	171 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583		M0R143	59 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583		M0R2P5	195 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	EREG	O14944	169 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	CRLF1	O75462	422 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	CRYGD	P07320	174 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	IGLL1	P15814	213 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	KRTAP10-3	P60369	221 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	NUTF2	P61970	127 aa	Known RBP	4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	ZNF876P	Q49A33	203 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	LBH	Q53QV2	105 aa	Predicted RBP	4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	PIK3CD-AS1	Q5SR53	167 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583		Q6ZN92	141 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	LINC00482	Q8N8I6	264 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	PTH2	Q96A98	100 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	LINC01587	Q99440	93 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	TMEM208	Q9BTX3	173 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	MCRIP2	Q9BUT9	160 aa	Known RBP	4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	CSTL1	Q9H114	145 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583	JPT2	Q9H910	190 aa		4.62	□□□□□ -1.67
PPP4R1-217	ENST00000580583		A8MWV9	139 aa		4.61	□□□□□ -1.67
PPP4R1-217	ENST00000580583		H7C1H1	209 aa		4.61	□□□□□ -1.67
PPP4R1-217	ENST00000580583	RHOD	O00212	210 aa		4.61	□□□□□ -1.67
PPP4R1-217	ENST00000580583	HTN1	P15515	57 aa		4.61	□□□□□ -1.67
PPP4R1-217	ENST00000580583	ODF1	Q14990	250 aa		4.61	□□□□□ -1.67
PPP4R1-217	ENST00000580583	BEAN1	Q3B7T3	259 aa		4.61	□□□□□ -1.67
PPP4R1-217	ENST00000580583	LCE3B	Q5TA77	95 aa		4.61	□□□□□ -1.67
PPP4R1-217	ENST00000580583	C11orf72	Q8NBR9	251 aa		4.61	□□□□□ -1.67
PPP4R1-217	ENST00000580583	SPX	Q9BT56	116 aa		4.61	□□□□□ -1.67
PPP4R1-217	ENST00000580583	EDA2R	Q9HAV5	297 aa		4.61	□□□□□ -1.67
PPP4R1-217	ENST00000580583	NSD1	Q96L73	2696 aa	Predicted RBP	4.61	□□□□□ -1.67
PPP4R1-217	ENST00000580583	ZFHX3	Q15911	3703 aa		4.61	□□□□□ -1.67
PPP4R1-217	ENST00000580583	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.61	□□□□□ -1.67
PPP4R1-217	ENST00000580583	NOTCH2	Q04721	2471 aa		4.61	□□□□□ -1.67
PPP4R1-217	ENST00000580583	OTOG	Q6ZRI0	2925 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	TRBV27	A0A0K0K1C4	114 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	SDHAF1	A6NFY7	115 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	LINC01549	A6NIU2	74 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583		M0QY20	66 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	VCY	O14598	125 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	G0S2	P27469	103 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	RHOH	Q15669	191 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	LCE2C	Q5TA81	110 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	SLC25A34	Q6PIV7	304 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	C2orf66	Q6UXQ4	117 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	NEGR1	Q7Z3B1	354 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	IL17D	Q8TAD2	202 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	TOMM6	Q96B49	74 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	KIR2DL4	Q99706	377 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	C2orf88	Q9BSF0	95 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	SNHG12	Q9BXW3	62 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	WFDC10A	Q9H1F0	79 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	MRPL16	Q9NX20	251 aa	Known RBP	4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	XCL2	Q9UBD3	114 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	CYSLTR1	Q9Y271	337 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	MUC4	Q99102	2169 aa		4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	ANK3	Q12955	4377 aa	Known RBP	4.6	□□□□□ -1.67
PPP4R1-217	ENST00000580583	TRAV12-1	A0A0B4J245	112 aa		4.59	□□□□□ -1.67
PPP4R1-217	ENST00000580583	DPM2	O94777	84 aa		4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms