RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 SSTP61278 116 aa12.73□□□□□ -0.37
PPP4R1-215ENST00000580182 DAZAP1Q96EP5 407 aaKnown RBP12.73□□□□□ -0.37
PPP4R1-215ENST00000580182 SMIM12Q96EX1 92 aa12.73□□□□□ -0.37
PPP4R1-215ENST00000580182 SSBP4Q9BWG4 385 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-215ENST00000580182 GAGE12JA6NER3 117 aa12.72□□□□□ -0.37
PPP4R1-215ENST00000580182 TNP2Q05952 138 aa12.72□□□□□ -0.37
PPP4R1-215ENST00000580182 GAGE1Q13065 139 aa12.72□□□□□ -0.37
PPP4R1-215ENST00000580182 GAGE4Q13068 117 aa12.72□□□□□ -0.37
PPP4R1-215ENST00000580182 GAGE5Q13069 117 aa12.72□□□□□ -0.37
PPP4R1-215ENST00000580182 GAGE13Q4V321 117 aa12.72□□□□□ -0.37
PPP4R1-215ENST00000580182 SH2D6Q7Z4S9 175 aa12.72□□□□□ -0.37
PPP4R1-215ENST00000580182 OR2D3Q8NGH3 330 aa12.72□□□□□ -0.37
PPP4R1-215ENST00000580182 DYNC1H1Q14204 4646 aaKnown RBP12.72□□□□□ -0.37
PPP4R1-215ENST00000580182 RHODO00212 210 aa12.71□□□□□ -0.37
PPP4R1-215ENST00000580182 OR5AL1P0C617 328 aa12.71□□□□□ -0.37
PPP4R1-215ENST00000580182 TOR2AQ5JU69 321 aa12.71□□□□□ -0.37
PPP4R1-215ENST00000580182 K7EN84 100 aa12.7□□□□□ -0.38
PPP4R1-215ENST00000580182 ATP6V0E2Q8NHE4 81 aa12.7□□□□□ -0.38
PPP4R1-215ENST00000580182 OCC1Q8TAD7 63 aa12.7□□□□□ -0.38
PPP4R1-215ENST00000580182 PKHD1P08F94 4074 aa12.7□□□□□ -0.38
PPP4R1-215ENST00000580182 P01737 135 aa12.69□□□□□ -0.38
PPP4R1-215ENST00000580182 LINC00694P0DN24 101 aa12.69□□□□□ -0.38
PPP4R1-215ENST00000580182 CEBPGP53567 150 aa12.69□□□□□ -0.38
PPP4R1-215ENST00000580182 TIRAPP58753 221 aa12.69□□□□□ -0.38
PPP4R1-215ENST00000580182 LINC00315P59091 139 aa12.69□□□□□ -0.38
PPP4R1-215ENST00000580182 SPANXN1Q5VSR9 72 aa12.69□□□□□ -0.38
PPP4R1-215ENST00000580182 NUDT10Q8NFP7 164 aa12.69□□□□□ -0.38
PPP4R1-215ENST00000580182 NUDT11Q96G61 164 aa12.69□□□□□ -0.38
PPP4R1-215ENST00000580182 TPPP3Q9BW30 176 aa12.69□□□□□ -0.38
PPP4R1-215ENST00000580182 TNFRSF18Q9Y5U5 241 aa12.69□□□□□ -0.38
PPP4R1-215ENST00000580182 LY96Q9Y6Y9 160 aa12.69□□□□□ -0.38
PPP4R1-215ENST00000580182 TMEM250H0YL14 139 aa12.68□□□□□ -0.38
PPP4R1-215ENST00000580182 IGLC6P0CF74 106 aa12.68□□□□□ -0.38
PPP4R1-215ENST00000580182 FAM210AQ96ND0 272 aa12.68□□□□□ -0.38
PPP4R1-215ENST00000580182 EIF5A2Q9GZV4 153 aaKnown RBP12.68□□□□□ -0.38
PPP4R1-215ENST00000580182 DNAH10OSP0CZ25 163 aa12.67□□□□□ -0.38
PPP4R1-215ENST00000580182 RPS20P60866 119 aaKnown RBP12.67□□□□□ -0.38
PPP4R1-215ENST00000580182 FER1L6-AS1Q8NA97 138 aa12.67□□□□□ -0.38
PPP4R1-215ENST00000580182 RNASE7Q9H1E1 156 aaKnown RBP12.67□□□□□ -0.38
PPP4R1-215ENST00000580182 GTSF1LQ9H1H1 148 aa12.67□□□□□ -0.38
PPP4R1-215ENST00000580182 BIN3Q9NQY0 253 aa12.67□□□□□ -0.38
PPP4R1-215ENST00000580182 OR10J3Q5JRS4 329 aa12.66□□□□□ -0.38
PPP4R1-215ENST00000580182 TEX261Q6UWH6 196 aa12.66□□□□□ -0.38
PPP4R1-215ENST00000580182 MSRB1Q9NZV6 116 aa12.66□□□□□ -0.38
PPP4R1-215ENST00000580182 ZNF56Q15929 161 aa12.65□□□□□ -0.38
PPP4R1-215ENST00000580182 LELP1Q5T871 98 aa12.65□□□□□ -0.38
PPP4R1-215ENST00000580182 TRAV8-6A0A0B4J262 113 aa12.64□□□□□ -0.39
PPP4R1-215ENST00000580182 IGHV3-38A0A0C4DH36 116 aa12.64□□□□□ -0.39
PPP4R1-215ENST00000580182 SRP19P09132 144 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-215ENST00000580182 EVI2AP22794 236 aa12.64□□□□□ -0.39
PPP4R1-215ENST00000580182 KIF25-AS1Q9Y6Z4 181 aa12.64□□□□□ -0.39
PPP4R1-215ENST00000580182 TRAV9-2A0A087WT02 112 aa12.63□□□□□ -0.39
PPP4R1-215ENST00000580182 XKRY2A2RUG3 117 aa12.63□□□□□ -0.39
PPP4R1-215ENST00000580182 RAB4BP61018 213 aa12.63□□□□□ -0.39
PPP4R1-215ENST00000580182 LYZL1Q6UWQ5 148 aa12.63□□□□□ -0.39
PPP4R1-215ENST00000580182 Q6ZRN7 208 aaPredicted RBP12.63□□□□□ -0.39
PPP4R1-215ENST00000580182 RPP21Q9H633 154 aaKnown RBP12.63□□□□□ -0.39
PPP4R1-215ENST00000580182 BTF3P20290 206 aaKnown RBP12.62□□□□□ -0.39
PPP4R1-215ENST00000580182 TRBV10-1A0A0K0K1A3 114 aa12.61□□□□□ -0.39
PPP4R1-215ENST00000580182 F5H697 171 aa12.61□□□□□ -0.39
PPP4R1-215ENST00000580182 IGHV3-30P01768 117 aa12.61□□□□□ -0.39
PPP4R1-215ENST00000580182 IGHV3-33P01772 117 aa12.61□□□□□ -0.39
PPP4R1-215ENST00000580182 IGHV3-30-3P0DP02 117 aa12.61□□□□□ -0.39
PPP4R1-215ENST00000580182 IGHV3-30-5P0DP03 117 aa12.61□□□□□ -0.39
PPP4R1-215ENST00000580182 CACNG7P62955 275 aa12.61□□□□□ -0.39
PPP4R1-215ENST00000580182 LINC01556Q5JQF7 62 aa12.61□□□□□ -0.39
PPP4R1-215ENST00000580182 Q8N3U1 123 aa12.61□□□□□ -0.39
PPP4R1-215ENST00000580182 NEXN-AS1Q8NBZ9 246 aa12.61□□□□□ -0.39
PPP4R1-215ENST00000580182 AP1S3Q96PC3 154 aa12.61□□□□□ -0.39
PPP4R1-215ENST00000580182 SMIM7Q9BQ49 75 aa12.61□□□□□ -0.39
PPP4R1-215ENST00000580182 C9JQL5 133 aa12.6□□□□□ -0.39
PPP4R1-215ENST00000580182 F2Z2F3 143 aa12.6□□□□□ -0.39
PPP4R1-215ENST00000580182 NDUFS6O75380 124 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-215ENST00000580182 SMIM17P0DL12 118 aa12.6□□□□□ -0.39
PPP4R1-215ENST00000580182 UBE2D3P61077 147 aa12.6□□□□□ -0.39
PPP4R1-215ENST00000580182 UBE2D2P62837 147 aa12.6□□□□□ -0.39
PPP4R1-215ENST00000580182 RPL36AP83881 106 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-215ENST00000580182 SRSF3P84103 164 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-215ENST00000580182 RPL36ALQ969Q0 106 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-215ENST00000580182 ZNF727A8MUV8 499 aa12.59□□□□□ -0.39
PPP4R1-215ENST00000580182 NTF3P20783 257 aa12.59□□□□□ -0.39
PPP4R1-215ENST00000580182 OR10G8Q8NGN5 311 aa12.59□□□□□ -0.39
PPP4R1-215ENST00000580182 GTSF1Q8WW33 167 aa12.59□□□□□ -0.39
PPP4R1-215ENST00000580182 KIAA1109Q2LD37 5005 aa12.58□□□□□ -0.4
PPP4R1-215ENST00000580182 TRBV7-3A0A075B6L6 115 aa12.58□□□□□ -0.4
PPP4R1-215ENST00000580182 K7EP13 123 aa12.58□□□□□ -0.4
PPP4R1-215ENST00000580182 GATCO43716 136 aaKnown RBP12.58□□□□□ -0.4
PPP4R1-215ENST00000580182 MGPP08493 103 aa12.58□□□□□ -0.4
PPP4R1-215ENST00000580182 CTRLP40313 264 aa12.58□□□□□ -0.4
PPP4R1-215ENST00000580182 FAM231DQ6ZW35 169 aa12.58□□□□□ -0.4
PPP4R1-215ENST00000580182 LINC01551Q86U37 167 aa12.58□□□□□ -0.4
PPP4R1-215ENST00000580182 ERVFC1-1P60608 527 aa12.57□□□□□ -0.4
PPP4R1-215ENST00000580182 C10orf126Q8N4M7 172 aa12.57□□□□□ -0.4
PPP4R1-215ENST00000580182 A0A087WWC5 75 aa12.56□□□□□ -0.4
PPP4R1-215ENST00000580182 NFE4Q86UQ8 179 aa12.56□□□□□ -0.4
PPP4R1-215ENST00000580182 DNAH5Q8TE73 4624 aa12.55□□□□□ -0.4
PPP4R1-215ENST00000580182 IBA57-AS1B1ANH7 110 aa12.55□□□□□ -0.4
PPP4R1-215ENST00000580182 TWIST1Q15672 202 aa12.55□□□□□ -0.4
PPP4R1-215ENST00000580182 SUMO4Q6EEV6 95 aa12.55□□□□□ -0.4
PPP4R1-215ENST00000580182 WDR73Q6P4I2 378 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms