RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 GATCO43716 136 aaKnown RBP16.42■□□□□ 0.22
ERBB2-209ENST00000578709 ERVFC1-1P60608 527 aa16.42■□□□□ 0.22
ERBB2-209ENST00000578709 SOHLH1Q5JUK2 328 aa16.42■□□□□ 0.22
ERBB2-209ENST00000578709 Q6ZSN1 163 aa16.42■□□□□ 0.22
ERBB2-209ENST00000578709 NAT8Q9UHE5 227 aa16.42■□□□□ 0.22
ERBB2-209ENST00000578709 LINC00588Q9Y4M8 146 aa16.42■□□□□ 0.22
ERBB2-209ENST00000578709 A0A087WWL8 130 aa16.41■□□□□ 0.22
ERBB2-209ENST00000578709 RHOHQ15669 191 aa16.41■□□□□ 0.22
ERBB2-209ENST00000578709 ESRGQ1W209 222 aa16.41■□□□□ 0.22
ERBB2-209ENST00000578709 CT83Q5H943 113 aa16.41■□□□□ 0.22
ERBB2-209ENST00000578709 PRADC1Q9BSG0 188 aa16.41■□□□□ 0.22
ERBB2-209ENST00000578709 TPPP3Q9BW30 176 aa16.41■□□□□ 0.22
ERBB2-209ENST00000578709 CTRLP40313 264 aa16.4■□□□□ 0.22
ERBB2-209ENST00000578709 RPL23P62829 140 aaKnown RBP16.4■□□□□ 0.22
ERBB2-209ENST00000578709 CACNG7P62955 275 aa16.4■□□□□ 0.22
ERBB2-209ENST00000578709 FAM74A4Q5TZK3 123 aa16.4■□□□□ 0.22
ERBB2-209ENST00000578709 LYZL1Q6UWQ5 148 aa16.4■□□□□ 0.22
ERBB2-209ENST00000578709 OSTCQ9NRP0 149 aa16.4■□□□□ 0.22
ERBB2-209ENST00000578709 LOC100131303A0A0U1RQF7 123 aa16.39■□□□□ 0.21
ERBB2-209ENST00000578709 SRIP30626 198 aa16.39■□□□□ 0.21
ERBB2-209ENST00000578709 WDR73Q6P4I2 378 aa16.39■□□□□ 0.21
ERBB2-209ENST00000578709 NEGR1Q7Z3B1 354 aa16.39■□□□□ 0.21
ERBB2-209ENST00000578709 ISOC2Q96AB3 205 aa16.39■□□□□ 0.21
ERBB2-209ENST00000578709 A8MWL6 223 aa16.38■□□□□ 0.21
ERBB2-209ENST00000578709 SH2D6Q7Z4S9 175 aa16.38■□□□□ 0.21
ERBB2-209ENST00000578709 GTSF1Q8WW33 167 aa16.38■□□□□ 0.21
ERBB2-209ENST00000578709 CNFNQ9BYD5 112 aa16.38■□□□□ 0.21
ERBB2-209ENST00000578709 ZNRF2Q8NHG8 242 aa16.37■□□□□ 0.21
ERBB2-209ENST00000578709 AP1S3Q96PC3 154 aa16.37■□□□□ 0.21
ERBB2-209ENST00000578709 MRPS16Q9Y3D3 137 aaKnown RBP16.37■□□□□ 0.21
ERBB2-209ENST00000578709 SSTP61278 116 aa16.36■□□□□ 0.21
ERBB2-209ENST00000578709 ADIRFQ15847 76 aa16.36■□□□□ 0.21
ERBB2-209ENST00000578709 UPK3BQ9BT76 320 aa16.36■□□□□ 0.21
ERBB2-209ENST00000578709 MSRB1Q9NZV6 116 aa16.36■□□□□ 0.21
ERBB2-209ENST00000578709 LYPD5Q6UWN5 251 aa16.35■□□□□ 0.21
ERBB2-209ENST00000578709 C14orf178Q8N769 122 aaPredicted RBP16.35■□□□□ 0.21
ERBB2-209ENST00000578709 C15orf54Q8N8G6 183 aa16.35■□□□□ 0.21
ERBB2-209ENST00000578709 KIF25-AS1Q9Y6Z4 181 aa16.35■□□□□ 0.21
ERBB2-209ENST00000578709 FOXA3P55318 350 aaPredicted RBP16.34■□□□□ 0.21
ERBB2-209ENST00000578709 TSKUQ8WUA8 353 aa16.34■□□□□ 0.21
ERBB2-209ENST00000578709 V9GYV3 84 aa16.34■□□□□ 0.21
ERBB2-209ENST00000578709 LINC00694P0DN24 101 aa16.33■□□□□ 0.2
ERBB2-209ENST00000578709 NTF3P20783 257 aa16.33■□□□□ 0.2
ERBB2-209ENST00000578709 RAB4BP61018 213 aa16.33■□□□□ 0.2
ERBB2-209ENST00000578709 GFRA4Q9GZZ7 299 aa16.33■□□□□ 0.2
ERBB2-209ENST00000578709 FAM231BA6NCW3 169 aa16.32■□□□□ 0.2
ERBB2-209ENST00000578709 TIRAPP58753 221 aa16.32■□□□□ 0.2
ERBB2-209ENST00000578709 LINC00315P59091 139 aa16.32■□□□□ 0.2
ERBB2-209ENST00000578709 UQCC3Q6UW78 93 aa16.32■□□□□ 0.2
ERBB2-209ENST00000578709 Q9UF83 564 aa16.32■□□□□ 0.2
ERBB2-209ENST00000578709 TRGC1P0CF51 173 aa16.31■□□□□ 0.2
ERBB2-209ENST00000578709 SMIM17P0DL12 118 aa16.31■□□□□ 0.2
ERBB2-209ENST00000578709 OR10G8Q8NGN5 311 aa16.31■□□□□ 0.2
ERBB2-209ENST00000578709 TRBV10-1A0A0K0K1A3 114 aa16.3■□□□□ 0.2
ERBB2-209ENST00000578709 ZNF56Q15929 161 aa16.3■□□□□ 0.2
ERBB2-209ENST00000578709 Q9H8V8 135 aa16.3■□□□□ 0.2
ERBB2-209ENST00000578709 IGLV2-18A0A075B6J9 118 aa16.29■□□□□ 0.2
ERBB2-209ENST00000578709 Q6ZR54 194 aa16.29■□□□□ 0.2
ERBB2-209ENST00000578709 PGLYRP4Q96LB8 373 aa16.29■□□□□ 0.2
ERBB2-209ENST00000578709 GAGE12JA6NER3 117 aa16.28■□□□□ 0.2
ERBB2-209ENST00000578709 HIGD1CA8MV81 97 aa16.28■□□□□ 0.2
ERBB2-209ENST00000578709 EVI2AP22794 236 aa16.28■□□□□ 0.2
ERBB2-209ENST00000578709 GAGE1Q13065 139 aa16.28■□□□□ 0.2
ERBB2-209ENST00000578709 GAGE4Q13068 117 aa16.28■□□□□ 0.2
ERBB2-209ENST00000578709 GAGE5Q13069 117 aa16.28■□□□□ 0.2
ERBB2-209ENST00000578709 TWIST1Q15672 202 aa16.28■□□□□ 0.2
ERBB2-209ENST00000578709 GAGE13Q4V321 117 aa16.28■□□□□ 0.2
ERBB2-209ENST00000578709 ATP6V0E2Q8NHE4 81 aa16.28■□□□□ 0.2
ERBB2-209ENST00000578709 F5H697 171 aa16.27■□□□□ 0.2
ERBB2-209ENST00000578709 GTSF1LQ9H1H1 148 aa16.26■□□□□ 0.19
ERBB2-209ENST00000578709 DPH3P1Q9H4G8 78 aa16.26■□□□□ 0.19
ERBB2-209ENST00000578709 NBDYA0A0U1RRE5 68 aa16.25■□□□□ 0.19
ERBB2-209ENST00000578709 LINC00862A6NCI5 91 aa16.25■□□□□ 0.19
ERBB2-209ENST00000578709 M0R2N4 97 aa16.25■□□□□ 0.19
ERBB2-209ENST00000578709 PNRC1Q12796 327 aaPredicted RBP16.25■□□□□ 0.19
ERBB2-209ENST00000578709 COMMD7Q86VX2 200 aa16.25■□□□□ 0.19
ERBB2-209ENST00000578709 MGPP08493 103 aa16.24■□□□□ 0.19
ERBB2-209ENST00000578709 RPL36AP83881 106 aaKnown RBP16.24■□□□□ 0.19
ERBB2-209ENST00000578709 RPL36ALQ969Q0 106 aaKnown RBP16.24■□□□□ 0.19
ERBB2-209ENST00000578709 BORCS7Q96B45 105 aa16.24■□□□□ 0.19
ERBB2-209ENST00000578709 TRBV7-3A0A075B6L6 115 aa16.23■□□□□ 0.19
ERBB2-209ENST00000578709 A0A1B0GUT8 65 aa16.23■□□□□ 0.19
ERBB2-209ENST00000578709 SMIM27A0A1W2PRY6 76 aa16.23■□□□□ 0.19
ERBB2-209ENST00000578709 TMEM218A2RU14 115 aa16.23■□□□□ 0.19
ERBB2-209ENST00000578709 SIVA1O15304 175 aa16.23■□□□□ 0.19
ERBB2-209ENST00000578709 NEXN-AS1Q8NBZ9 246 aa16.23■□□□□ 0.19
ERBB2-209ENST00000578709 NUP35Q8NFH5 326 aa16.23■□□□□ 0.19
ERBB2-209ENST00000578709 M0QY20 66 aa16.22■□□□□ 0.19
ERBB2-209ENST00000578709 UBE2D3P61077 147 aa16.22■□□□□ 0.19
ERBB2-209ENST00000578709 UBE2D2P62837 147 aa16.22■□□□□ 0.19
ERBB2-209ENST00000578709 SUMO4Q6EEV6 95 aa16.22■□□□□ 0.19
ERBB2-209ENST00000578709 NAT8BQ9UHF3 227 aa16.22■□□□□ 0.19
ERBB2-209ENST00000578709 ADCYAP1P18509 176 aa16.21■□□□□ 0.19
ERBB2-209ENST00000578709 LELP1Q5T871 98 aa16.21■□□□□ 0.19
ERBB2-209ENST00000578709 H7C1H1 209 aa16.2■□□□□ 0.18
ERBB2-209ENST00000578709 TTC32Q5I0X7 151 aa16.2■□□□□ 0.18
ERBB2-209ENST00000578709 SMIM15Q7Z3B0 74 aa16.2■□□□□ 0.18
ERBB2-209ENST00000578709 DNAH10Q8IVF4 4471 aa16.19■□□□□ 0.18
ERBB2-209ENST00000578709 PPP1R2P9O14990 202 aa16.19■□□□□ 0.18
ERBB2-209ENST00000578709 WFDC10BQ8IUB3 73 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms