RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 TCTAP57738 103 aa6.56□□□□□ -1.36
NPLOC4-219ENST00000576713 IFITM2Q01629 132 aa6.56□□□□□ -1.36
NPLOC4-219ENST00000576713 ZNF876PQ49A33 203 aa6.56□□□□□ -1.36
NPLOC4-219ENST00000576713 DNLZQ5SXM8 178 aa6.56□□□□□ -1.36
NPLOC4-219ENST00000576713 PARLQ9H300 379 aa6.56□□□□□ -1.36
NPLOC4-219ENST00000576713 SCRT2Q9NQ03 307 aa6.56□□□□□ -1.36
NPLOC4-219ENST00000576713 MUC21A0A0G2JKD1 596 aa6.55□□□□□ -1.36
NPLOC4-219ENST00000576713 LOC100131303A0A0U1RQF7 123 aa6.55□□□□□ -1.36
NPLOC4-219ENST00000576713 MUC21A0A140T8X8 626 aa6.55□□□□□ -1.36
NPLOC4-219ENST00000576713 TNFRSF6BO95407 300 aa6.55□□□□□ -1.36
NPLOC4-219ENST00000576713 NUDT3O95989 172 aa6.55□□□□□ -1.36
NPLOC4-219ENST00000576713 SRP19P09132 144 aaKnown RBP6.55□□□□□ -1.36
NPLOC4-219ENST00000576713 GZMBP10144 247 aa6.55□□□□□ -1.36
NPLOC4-219ENST00000576713 MGST1P10620 155 aaKnown RBP6.55□□□□□ -1.36
NPLOC4-219ENST00000576713 ASIPP42127 132 aa6.55□□□□□ -1.36
NPLOC4-219ENST00000576713 GNG4P50150 75 aa6.55□□□□□ -1.36
NPLOC4-219ENST00000576713 CFAP126Q5VTH2 177 aa6.55□□□□□ -1.36
NPLOC4-219ENST00000576713 OCC1Q8TAD7 63 aa6.55□□□□□ -1.36
NPLOC4-219ENST00000576713 FAM210BQ96KR6 192 aa6.55□□□□□ -1.36
NPLOC4-219ENST00000576713 SAMD10Q9BYL1 202 aa6.55□□□□□ -1.36
NPLOC4-219ENST00000576713 IL36BQ9NZH7 164 aa6.55□□□□□ -1.36
NPLOC4-219ENST00000576713 Q9UF83 564 aa6.55□□□□□ -1.36
NPLOC4-219ENST00000576713 PKHD1P08F94 4074 aa6.54□□□□□ -1.36
NPLOC4-219ENST00000576713 A0A096LPF7 62 aa6.54□□□□□ -1.36
NPLOC4-219ENST00000576713 IGHV3-73A0A0B4J1V6 119 aa6.54□□□□□ -1.36
NPLOC4-219ENST00000576713 TRAV4A0A0B4J268 109 aa6.54□□□□□ -1.36
NPLOC4-219ENST00000576713 RS1O15537 224 aa6.54□□□□□ -1.36
NPLOC4-219ENST00000576713 TAGLN2P37802 199 aaKnown RBP6.54□□□□□ -1.36
NPLOC4-219ENST00000576713 CEBPGP53567 150 aa6.54□□□□□ -1.36
NPLOC4-219ENST00000576713 CRYBA4P53673 196 aa6.54□□□□□ -1.36
NPLOC4-219ENST00000576713 UFSP1Q6NVU6 142 aa6.54□□□□□ -1.36
NPLOC4-219ENST00000576713 OR10AG1Q8NH19 301 aa6.54□□□□□ -1.36
NPLOC4-219ENST00000576713 EIF5A2Q9GZV4 153 aaKnown RBP6.54□□□□□ -1.36
NPLOC4-219ENST00000576713 NACAE9PAV3 2078 aa6.54□□□□□ -1.36
NPLOC4-219ENST00000576713 TMEM250H0YL14 139 aa6.53□□□□□ -1.36
NPLOC4-219ENST00000576713 S100A4P26447 101 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-219ENST00000576713 OR4C5Q8NGB2 326 aa6.53□□□□□ -1.36
NPLOC4-219ENST00000576713 PTH2Q96A98 100 aa6.53□□□□□ -1.36
NPLOC4-219ENST00000576713 RNASE7Q9H1E1 156 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-219ENST00000576713 HHLA3Q9XRX5 114 aa6.53□□□□□ -1.36
NPLOC4-219ENST00000576713 LINC00588Q9Y4M8 146 aa6.53□□□□□ -1.36
NPLOC4-219ENST00000576713 DYNC1H1Q14204 4646 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-219ENST00000576713 IGLC6P0CF74 106 aa6.52□□□□□ -1.37
NPLOC4-219ENST00000576713 GATA1P15976 413 aaPredicted RBP6.52□□□□□ -1.37
NPLOC4-219ENST00000576713 ESRGQ1W209 222 aa6.52□□□□□ -1.37
NPLOC4-219ENST00000576713 C15orf53Q8NAA6 179 aa6.52□□□□□ -1.37
NPLOC4-219ENST00000576713 PRO0255Q9UI72 69 aa6.52□□□□□ -1.37
NPLOC4-219ENST00000576713 IGLV2-18A0A075B6J9 118 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 TRGV4A0A0C4DH28 118 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 H3BNG1 76 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 K7EQD1 137 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 M0R381 172 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 SNAI2O43623 268 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 NXPH4O95158 308 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 CXCL1P09341 107 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 P0DMU3 169 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 FAM231AP0DMU4 169 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 FAM231CP0DMU5 169 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 SSTP61278 116 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 KRTAP15-1Q3LI76 137 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 SLC25A29Q8N8R3 303 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 OR2D3Q8NGH3 330 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 ZNRF2Q8NHG8 242 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 DAZAP1Q96EP5 407 aaKnown RBP6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 SMIM12Q96EX1 92 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 MSRB1Q9NZV6 116 aa6.51□□□□□ -1.37
NPLOC4-219ENST00000576713 M0R2N4 97 aa6.5□□□□□ -1.37
NPLOC4-219ENST00000576713 ATP6V1G1O75348 118 aa6.5□□□□□ -1.37
NPLOC4-219ENST00000576713 CRYGDP07320 174 aa6.5□□□□□ -1.37
NPLOC4-219ENST00000576713 LINC01551Q86U37 167 aa6.5□□□□□ -1.37
NPLOC4-219ENST00000576713 C14orf178Q8N769 122 aaPredicted RBP6.5□□□□□ -1.37
NPLOC4-219ENST00000576713 GTSF1Q8WW33 167 aa6.5□□□□□ -1.37
NPLOC4-219ENST00000576713 SFRP2Q96HF1 295 aa6.5□□□□□ -1.37
NPLOC4-219ENST00000576713 SMIM7Q9BQ49 75 aa6.5□□□□□ -1.37
NPLOC4-219ENST00000576713 PHLDA3Q9Y5J5 127 aa6.5□□□□□ -1.37
NPLOC4-219ENST00000576713 NDUFS6O75380 124 aaKnown RBP6.49□□□□□ -1.37
NPLOC4-219ENST00000576713 P01737 135 aa6.49□□□□□ -1.37
NPLOC4-219ENST00000576713 OR5AL1P0C617 328 aa6.49□□□□□ -1.37
NPLOC4-219ENST00000576713 RNF212Q495C1 297 aa6.49□□□□□ -1.37
NPLOC4-219ENST00000576713 KRTAP1-5Q9BYS1 174 aa6.49□□□□□ -1.37
NPLOC4-219ENST00000576713 DNAH5Q8TE73 4624 aa6.49□□□□□ -1.37
NPLOC4-219ENST00000576713 BIRC6Q9NR09 4857 aa6.49□□□□□ -1.37
NPLOC4-219ENST00000576713 ZNF727A8MUV8 499 aa6.48□□□□□ -1.37
NPLOC4-219ENST00000576713 A8MWV9 139 aa6.48□□□□□ -1.37
NPLOC4-219ENST00000576713 LINC00694P0DN24 101 aa6.48□□□□□ -1.37
NPLOC4-219ENST00000576713 LINC00315P59091 139 aa6.48□□□□□ -1.37
NPLOC4-219ENST00000576713 RPL23P62829 140 aaKnown RBP6.48□□□□□ -1.37
NPLOC4-219ENST00000576713 PIK3CD-AS1Q5SR53 167 aa6.48□□□□□ -1.37
NPLOC4-219ENST00000576713 FAM74A4Q5TZK3 123 aa6.48□□□□□ -1.37
NPLOC4-219ENST00000576713 LYPD5Q6UWN5 251 aa6.48□□□□□ -1.37
NPLOC4-219ENST00000576713 LYZL1Q6UWQ5 148 aa6.48□□□□□ -1.37
NPLOC4-219ENST00000576713 UBE2DNLQ8IWF7 75 aa6.48□□□□□ -1.37
NPLOC4-219ENST00000576713 ZFP82Q8N141 532 aa6.48□□□□□ -1.37
NPLOC4-219ENST00000576713 FER1L6-AS1Q8NA97 138 aa6.48□□□□□ -1.37
NPLOC4-219ENST00000576713 TPPP3Q9BW30 176 aa6.48□□□□□ -1.37
NPLOC4-219ENST00000576713 RPP21Q9H633 154 aaKnown RBP6.48□□□□□ -1.37
NPLOC4-219ENST00000576713 ICOSQ9Y6W8 199 aa6.48□□□□□ -1.37
NPLOC4-219ENST00000576713 KIF25-AS1Q9Y6Z4 181 aa6.48□□□□□ -1.37
NPLOC4-219ENST00000576713 TRBV6-4A0A1B0GX49 114 aa6.47□□□□□ -1.37
NPLOC4-219ENST00000576713 CTRLP40313 264 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms