RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 UNQ9165/PRO28630Q6UXU0 137 aa13.78□□□□□ -0.2
ATPAF1-214ENST00000576409 MORN3Q6PF18 240 aaPredicted RBP13.77□□□□□ -0.2
ATPAF1-214ENST00000576409 B5MCH6 92 aa13.77□□□□□ -0.21
ATPAF1-214ENST00000576409 MYCNOSP40205 109 aa13.77□□□□□ -0.21
ATPAF1-214ENST00000576409 RBAKDNA6NC62 111 aa13.77□□□□□ -0.21
ATPAF1-214ENST00000576409 PEMTQ9UBM1 199 aa13.77□□□□□ -0.21
ATPAF1-214ENST00000576409 LAMA1P25391 3075 aa13.76□□□□□ -0.21
ATPAF1-214ENST00000576409 SPEGQ15772 3267 aa13.76□□□□□ -0.21
ATPAF1-214ENST00000576409 RPL36AP83881 106 aaKnown RBP13.76□□□□□ -0.21
ATPAF1-214ENST00000576409 MAPKAPK5-AS1Q8N8E1 139 aa13.76□□□□□ -0.21
ATPAF1-214ENST00000576409 RPL36ALQ969Q0 106 aaKnown RBP13.76□□□□□ -0.21
ATPAF1-214ENST00000576409 GAGE12JA6NER3 117 aa13.76□□□□□ -0.21
ATPAF1-214ENST00000576409 C11orf86A6NJI1 115 aa13.76□□□□□ -0.21
ATPAF1-214ENST00000576409 I3L3M4 83 aa13.76□□□□□ -0.21
ATPAF1-214ENST00000576409 GAGE4Q13068 117 aa13.76□□□□□ -0.21
ATPAF1-214ENST00000576409 GAGE5Q13069 117 aa13.76□□□□□ -0.21
ATPAF1-214ENST00000576409 TCTEX1D4Q5JR98 221 aa13.76□□□□□ -0.21
ATPAF1-214ENST00000576409 C2orf91Q6ZV80 131 aa13.76□□□□□ -0.21
ATPAF1-214ENST00000576409 DAND5Q8N907 189 aa13.76□□□□□ -0.21
ATPAF1-214ENST00000576409 IGLV2-11P01706 119 aa13.75□□□□□ -0.21
ATPAF1-214ENST00000576409 NPBQ8NG41 125 aa13.75□□□□□ -0.21
ATPAF1-214ENST00000576409 DEFB136Q30KP8 78 aa13.75□□□□□ -0.21
ATPAF1-214ENST00000576409 ZNRF2Q8NHG8 242 aa13.75□□□□□ -0.21
ATPAF1-214ENST00000576409 LINC00574Q9H8X3 128 aa13.75□□□□□ -0.21
ATPAF1-214ENST00000576409 ZNF415Q09FC8 603 aa13.75□□□□□ -0.21
ATPAF1-214ENST00000576409 GAGE2AQ6NT46 116 aa13.75□□□□□ -0.21
ATPAF1-214ENST00000576409 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.75□□□□□ -0.21
ATPAF1-214ENST00000576409 IGHV7-4-1A0A0J9YVY3 117 aa13.75□□□□□ -0.21
ATPAF1-214ENST00000576409 IGKV2-29A2NJV5 120 aaPredicted RBP13.75□□□□□ -0.21
ATPAF1-214ENST00000576409 H3BMM0 161 aa13.75□□□□□ -0.21
ATPAF1-214ENST00000576409 UBE2WQ96B02 151 aa13.75□□□□□ -0.21
ATPAF1-214ENST00000576409 TMEM141Q96I45 108 aa13.75□□□□□ -0.21
ATPAF1-214ENST00000576409 SPAG8Q99932 426 aaPredicted RBP13.75□□□□□ -0.21
ATPAF1-214ENST00000576409 PFN2P35080 140 aa13.74□□□□□ -0.21
ATPAF1-214ENST00000576409 MSMBP08118 114 aa13.74□□□□□ -0.21
ATPAF1-214ENST00000576409 CFC1BP0CG36 223 aa13.74□□□□□ -0.21
ATPAF1-214ENST00000576409 CFC1P0CG37 223 aa13.74□□□□□ -0.21
ATPAF1-214ENST00000576409 ZNF493Q6ZR52 646 aa13.74□□□□□ -0.21
ATPAF1-214ENST00000576409 SUMO4Q6EEV6 95 aa13.74□□□□□ -0.21
ATPAF1-214ENST00000576409 AJUBAQ96IF1 538 aa13.74□□□□□ -0.21
ATPAF1-214ENST00000576409 IGHV4-38-2P0DP08 117 aa13.73□□□□□ -0.21
ATPAF1-214ENST00000576409 HIST1H4AP62805 103 aaKnown RBP13.73□□□□□ -0.21
ATPAF1-214ENST00000576409 ZFP2Q6ZN57 461 aa13.73□□□□□ -0.21
ATPAF1-214ENST00000576409 BAALCQ8WXS3 180 aa13.73□□□□□ -0.21
ATPAF1-214ENST00000576409 ACANP16112 2415 aa13.73□□□□□ -0.21
ATPAF1-214ENST00000576409 PF4P02776 101 aa13.72□□□□□ -0.21
ATPAF1-214ENST00000576409 C3orf56Q8N813 242 aa13.72□□□□□ -0.21
ATPAF1-214ENST00000576409 MAP1AP78559 2803 aaPredicted RBP13.72□□□□□ -0.21
ATPAF1-214ENST00000576409 DEFB130BP0DP73 79 aa13.72□□□□□ -0.21
ATPAF1-214ENST00000576409 DEFB130AP0DP74 79 aa13.72□□□□□ -0.21
ATPAF1-214ENST00000576409 C1QTNF4Q9BXJ3 329 aa13.72□□□□□ -0.21
ATPAF1-214ENST00000576409 PRRC2AP48634 2157 aaKnown RBP13.72□□□□□ -0.21
ATPAF1-214ENST00000576409 RNF223E7ERA6 249 aa13.72□□□□□ -0.21
ATPAF1-214ENST00000576409 CRPP02741 224 aa13.72□□□□□ -0.21
ATPAF1-214ENST00000576409 Q6ZQT7 251 aa13.72□□□□□ -0.21
ATPAF1-214ENST00000576409 NBEAQ8NFP9 2946 aa13.71□□□□□ -0.21
ATPAF1-214ENST00000576409 MUSTN1Q8IVN3 82 aa13.71□□□□□ -0.21
ATPAF1-214ENST00000576409 SS18L2Q9UHA2 77 aa13.71□□□□□ -0.21
ATPAF1-214ENST00000576409 LGALS1P09382 135 aaKnown RBP13.71□□□□□ -0.21
ATPAF1-214ENST00000576409 CARD19Q96LW7 228 aa13.71□□□□□ -0.21
ATPAF1-214ENST00000576409 IGHV4-61A0A0C4DH41 118 aa13.71□□□□□ -0.22
ATPAF1-214ENST00000576409 IGHV4-59P01825 116 aa13.71□□□□□ -0.22
ATPAF1-214ENST00000576409 Q8NA96 180 aa13.71□□□□□ -0.22
ATPAF1-214ENST00000576409 HIGD1BQ9P298 99 aa13.71□□□□□ -0.22
ATPAF1-214ENST00000576409 C15orf53Q8NAA6 179 aa13.7□□□□□ -0.22
ATPAF1-214ENST00000576409 C6orf226Q5I0X4 101 aa13.7□□□□□ -0.22
ATPAF1-214ENST00000576409 IGLC6P0CF74 106 aa13.69□□□□□ -0.22
ATPAF1-214ENST00000576409 RASL10AQ92737 203 aa13.69□□□□□ -0.22
ATPAF1-214ENST00000576409 EDA2RQ9HAV5 297 aa13.69□□□□□ -0.22
ATPAF1-214ENST00000576409 NSUN5P1Q3KNT7 163 aa13.69□□□□□ -0.22
ATPAF1-214ENST00000576409 CEMP1Q6PRD7 247 aaPredicted RBP13.69□□□□□ -0.22
ATPAF1-214ENST00000576409 CENPEQ02224 2701 aa13.69□□□□□ -0.22
ATPAF1-214ENST00000576409 NRGNQ92686 78 aa13.68□□□□□ -0.22
ATPAF1-214ENST00000576409 TRAV26-1A0A087WT03 109 aa13.68□□□□□ -0.22
ATPAF1-214ENST00000576409 FOXI1Q12951 378 aa13.68□□□□□ -0.22
ATPAF1-214ENST00000576409 MDFICQ9P1T7 246 aa13.68□□□□□ -0.22
ATPAF1-214ENST00000576409 RBMY1BA6NDE4 496 aaKnown RBP13.68□□□□□ -0.22
ATPAF1-214ENST00000576409 RBMY1EA6NEQ0 496 aaKnown RBP13.68□□□□□ -0.22
ATPAF1-214ENST00000576409 RBMY1DP0C7P1 496 aaKnown RBP13.68□□□□□ -0.22
ATPAF1-214ENST00000576409 RBMY1A1P0DJD3 496 aaKnown RBP13.68□□□□□ -0.22
ATPAF1-214ENST00000576409 RBMY1CP0DJD4 496 aa13.68□□□□□ -0.22
ATPAF1-214ENST00000576409 CCDC140Q96MF4 163 aa13.67□□□□□ -0.22
ATPAF1-214ENST00000576409 TRANK1O15050 2925 aa13.67□□□□□ -0.22
ATPAF1-214ENST00000576409 NXPH4O95158 308 aa13.67□□□□□ -0.22
ATPAF1-214ENST00000576409 CFAP161Q6P656 301 aa13.67□□□□□ -0.22
ATPAF1-214ENST00000576409 C16orf54Q6UWD8 224 aa13.67□□□□□ -0.22
ATPAF1-214ENST00000576409 Q8N1Y9 231 aa13.67□□□□□ -0.22
ATPAF1-214ENST00000576409 MALP21145 153 aa13.66□□□□□ -0.22
ATPAF1-214ENST00000576409 ANKRD29Q8N6D5 301 aa13.66□□□□□ -0.22
ATPAF1-214ENST00000576409 SZT2Q5T011 3432 aa13.66□□□□□ -0.22
ATPAF1-214ENST00000576409 SMAD5-AS1Q9Y6J3 95 aa13.66□□□□□ -0.22
ATPAF1-214ENST00000576409 E9PLD3 99 aa13.65□□□□□ -0.22
ATPAF1-214ENST00000576409 INSP01308 110 aa13.65□□□□□ -0.22
ATPAF1-214ENST00000576409 TEN1Q86WV5 123 aa13.65□□□□□ -0.22
ATPAF1-214ENST00000576409 CRYGBP07316 175 aa13.65□□□□□ -0.22
ATPAF1-214ENST00000576409 APRG1Q8IVJ8 170 aa13.65□□□□□ -0.22
ATPAF1-214ENST00000576409 MGAQ8IWI9 3026 aa13.65□□□□□ -0.22
ATPAF1-214ENST00000576409 LEPROTO15243 131 aa13.64□□□□□ -0.23
ATPAF1-214ENST00000576409 GAGE7O76087 117 aa13.64□□□□□ -0.23
ATPAF1-214ENST00000576409 GAGE12FP0CL80 117 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms