RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 FAM74A4Q5TZK3 123 aa10.17□□□□□ -0.78
NME3-211ENST00000568561 DMRTA1Q5VZB9 504 aa10.17□□□□□ -0.78
NME3-211ENST00000568561 NIT1Q86X76 327 aa10.17□□□□□ -0.78
NME3-211ENST00000568561 PSMG3Q9BT73 122 aaPredicted RBP10.17□□□□□ -0.78
NME3-211ENST00000568561 TMEM167BQ9NRX6 74 aa10.17□□□□□ -0.78
NME3-211ENST00000568561 KLK12Q9UKR0 248 aa10.17□□□□□ -0.78
NME3-211ENST00000568561 URGCP-MRPS24S4R325 110 aa10.17□□□□□ -0.78
NME3-211ENST00000568561 PKHD1L1Q86WI1 4243 aa10.17□□□□□ -0.78
NME3-211ENST00000568561 A0A087WWC5 75 aa10.16□□□□□ -0.78
NME3-211ENST00000568561 GRIFINA4D1Z8 144 aa10.16□□□□□ -0.78
NME3-211ENST00000568561 B4DEV8 164 aa10.16□□□□□ -0.78
NME3-211ENST00000568561 BCL2L11O43521 198 aa10.16□□□□□ -0.78
NME3-211ENST00000568561 CXorf1O96002 111 aa10.16□□□□□ -0.78
NME3-211ENST00000568561 UBE2G2P60604 165 aa10.16□□□□□ -0.78
NME3-211ENST00000568561 Q86TA4 180 aa10.16□□□□□ -0.78
NME3-211ENST00000568561 UBE2WQ96B02 151 aa10.16□□□□□ -0.78
NME3-211ENST00000568561 CYTL1Q9NRR1 136 aa10.16□□□□□ -0.78
NME3-211ENST00000568561 A0A087WWL8 130 aa10.15□□□□□ -0.78
NME3-211ENST00000568561 IFNA7P01567 189 aa10.15□□□□□ -0.78
NME3-211ENST00000568561 RMI2Q96E14 147 aa10.15□□□□□ -0.78
NME3-211ENST00000568561 CHAC1Q9BUX1 264 aa10.15□□□□□ -0.78
NME3-211ENST00000568561 ACTR3CQ9C0K3 210 aaPredicted RBP10.15□□□□□ -0.78
NME3-211ENST00000568561 IL36BQ9NZH7 164 aa10.15□□□□□ -0.78
NME3-211ENST00000568561 COX11Q9Y6N1 276 aa10.15□□□□□ -0.78
NME3-211ENST00000568561 KANTRA0A1W2PQU2 76 aa10.14□□□□□ -0.79
NME3-211ENST00000568561 FABP5P3A8MUU1 101 aa10.14□□□□□ -0.79
NME3-211ENST00000568561 MBP02144 154 aa10.14□□□□□ -0.79
NME3-211ENST00000568561 ARMS2P0C7Q2 107 aa10.14□□□□□ -0.79
NME3-211ENST00000568561 FGF8P55075 233 aaPredicted RBP10.14□□□□□ -0.79
NME3-211ENST00000568561 PIK3CD-AS1Q5SR53 167 aa10.14□□□□□ -0.79
NME3-211ENST00000568561 Q8N976 141 aa10.14□□□□□ -0.79
NME3-211ENST00000568561 CIRBP-AS1Q8TBR5 109 aa10.14□□□□□ -0.79
NME3-211ENST00000568561 ZC2HC1AQ96GY0 325 aa10.14□□□□□ -0.79
NME3-211ENST00000568561 TMSB15BA0A087X1C1 80 aa10.13□□□□□ -0.79
NME3-211ENST00000568561 A0A1W2PRE2 83 aa10.13□□□□□ -0.79
NME3-211ENST00000568561 RHODO00212 210 aa10.13□□□□□ -0.79
NME3-211ENST00000568561 PEX7O00628 323 aa10.13□□□□□ -0.79
NME3-211ENST00000568561 CRIP1P50238 77 aa10.13□□□□□ -0.79
NME3-211ENST00000568561 ZNF726P1Q15940 193 aa10.13□□□□□ -0.79
NME3-211ENST00000568561 SYT8Q8NBV8 401 aa10.13□□□□□ -0.79
NME3-211ENST00000568561 A0A087WX48 190 aa10.12□□□□□ -0.79
NME3-211ENST00000568561 BORCS7-ASMTA0A0B4J1R7 106 aa10.12□□□□□ -0.79
NME3-211ENST00000568561 KRBOX1C9JBD0 128 aa10.12□□□□□ -0.79
NME3-211ENST00000568561 M0R381 172 aa10.12□□□□□ -0.79
NME3-211ENST00000568561 SH2D1AO60880 128 aa10.12□□□□□ -0.79
NME3-211ENST00000568561 SERF2P84101 59 aa10.12□□□□□ -0.79
NME3-211ENST00000568561 RPL7L1Q6DKI1 246 aaKnown RBP10.12□□□□□ -0.79
NME3-211ENST00000568561 SLC51BQ86UW2 128 aa10.12□□□□□ -0.79
NME3-211ENST00000568561 STOML3Q8TAV4 291 aa10.12□□□□□ -0.79
NME3-211ENST00000568561 ZNF471Q9BX82 626 aaPredicted RBP10.11□□□□□ -0.79
NME3-211ENST00000568561 IGLV2-8P01709 118 aa10.1□□□□□ -0.79
NME3-211ENST00000568561 EIF5AP63241 154 aaKnown RBP10.1□□□□□ -0.79
NME3-211ENST00000568561 SFRP2Q96HF1 295 aa10.1□□□□□ -0.79
NME3-211ENST00000568561 PHLDA3Q9Y5J5 127 aa10.1□□□□□ -0.79
NME3-211ENST00000568561 CTXND1A0A1B0GTU2 59 aa10.09□□□□□ -0.79
NME3-211ENST00000568561 FAM74A7A6NL05 159 aa10.09□□□□□ -0.79
NME3-211ENST00000568561 SEC11BP0C7V7 166 aa10.09□□□□□ -0.79
NME3-211ENST00000568561 TPT1P13693 172 aaKnown RBP10.09□□□□□ -0.79
NME3-211ENST00000568561 DNLZQ5SXM8 178 aa10.09□□□□□ -0.79
NME3-211ENST00000568561 UBE2D3P61077 147 aa10.08□□□□□ -0.8
NME3-211ENST00000568561 UBE2D2P62837 147 aa10.08□□□□□ -0.8
NME3-211ENST00000568561 FAM162BQ5T6X4 162 aa10.08□□□□□ -0.8
NME3-211ENST00000568561 SERTAD4-AS1Q5TG53 156 aa10.08□□□□□ -0.8
NME3-211ENST00000568561 KCNIP4Q6PIL6 250 aa10.08□□□□□ -0.8
NME3-211ENST00000568561 ATRAIDQ6UW56 229 aa10.08□□□□□ -0.8
NME3-211ENST00000568561 C1orf43Q9BWL3 253 aa10.08□□□□□ -0.8
NME3-211ENST00000568561 TMEM262E9PQX1 116 aa10.07□□□□□ -0.8
NME3-211ENST00000568561 RPL36AP83881 106 aaKnown RBP10.07□□□□□ -0.8
NME3-211ENST00000568561 ELOBQ15370 118 aa10.07□□□□□ -0.8
NME3-211ENST00000568561 MPV17L2Q567V2 206 aa10.07□□□□□ -0.8
NME3-211ENST00000568561 ENHOQ6UWT2 76 aa10.07□□□□□ -0.8
NME3-211ENST00000568561 C15orf54Q8N8G6 183 aa10.07□□□□□ -0.8
NME3-211ENST00000568561 RPL36ALQ969Q0 106 aaKnown RBP10.07□□□□□ -0.8
NME3-211ENST00000568561 HIST1H2BAQ96A08 127 aa10.07□□□□□ -0.8
NME3-211ENST00000568561 CHCHD7Q9BUK0 85 aa10.07□□□□□ -0.8
NME3-211ENST00000568561 OXTP01178 125 aa10.06□□□□□ -0.8
NME3-211ENST00000568561 HLA-DQA1P01909 254 aa10.06□□□□□ -0.8
NME3-211ENST00000568561 HNRNPA3P51991 378 aaKnown RBP10.06□□□□□ -0.8
NME3-211ENST00000568561 UBE2G1P62253 170 aa10.06□□□□□ -0.8
NME3-211ENST00000568561 LINC01559Q495D7 138 aa10.06□□□□□ -0.8
NME3-211ENST00000568561 ZFP82Q8N141 532 aa10.06□□□□□ -0.8
NME3-211ENST00000568561 TRBV7-3A0A075B6L6 115 aa10.05□□□□□ -0.8
NME3-211ENST00000568561 TRBV10-1A0A0K0K1A3 114 aa10.05□□□□□ -0.8
NME3-211ENST00000568561 USP17L23D6RBM5 183 aa10.05□□□□□ -0.8
NME3-211ENST00000568561 CRPP02741 224 aa10.05□□□□□ -0.8
NME3-211ENST00000568561 Q0VG73 95 aa10.05□□□□□ -0.8
NME3-211ENST00000568561 ZNF674Q2M3X9 581 aa10.05□□□□□ -0.8
NME3-211ENST00000568561 ZFP30Q9Y2G7 519 aa10.05□□□□□ -0.8
NME3-211ENST00000568561 TRBV6-8A0A0A6YYG3 113 aa10.04□□□□□ -0.8
NME3-211ENST00000568561 MAP1LC3B2A6NCE7 125 aa10.04□□□□□ -0.8
NME3-211ENST00000568561 ANGP03950 147 aaKnown RBP10.04□□□□□ -0.8
NME3-211ENST00000568561 RPL37AP61513 92 aaKnown RBP10.04□□□□□ -0.8
NME3-211ENST00000568561 RPL19P84098 196 aaKnown RBP10.04□□□□□ -0.8
NME3-211ENST00000568561 IFITM2Q01629 132 aa10.04□□□□□ -0.8
NME3-211ENST00000568561 ZNF56Q15929 161 aa10.04□□□□□ -0.8
NME3-211ENST00000568561 C14orf177Q52M58 125 aa10.04□□□□□ -0.8
NME3-211ENST00000568561 AKR1C8PQ5T2L2 129 aa10.04□□□□□ -0.8
NME3-211ENST00000568561 EIF5AL1Q6IS14 154 aaKnown RBP10.04□□□□□ -0.8
NME3-211ENST00000568561 TEX261Q6UWH6 196 aa10.04□□□□□ -0.8
NME3-211ENST00000568561 COX8CQ7Z4L0 72 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms