RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 A8MWV9 139 aa13.45□□□□□ -0.26
COMMD4-213ENST00000565834 HIST1H2BKO60814 126 aa13.45□□□□□ -0.26
COMMD4-213ENST00000565834 HIST1H2BJP06899 126 aa13.45□□□□□ -0.26
COMMD4-213ENST00000565834 HIST1H2BOP23527 126 aa13.45□□□□□ -0.26
COMMD4-213ENST00000565834 HIST1H2BBP33778 126 aa13.45□□□□□ -0.26
COMMD4-213ENST00000565834 HIST1H2BDP58876 126 aa13.45□□□□□ -0.26
COMMD4-213ENST00000565834 HIST1H2BCP62807 126 aa13.45□□□□□ -0.26
COMMD4-213ENST00000565834 HIST2H2BEQ16778 126 aa13.45□□□□□ -0.26
COMMD4-213ENST00000565834 MRPL51Q4U2R6 128 aaKnown RBP13.45□□□□□ -0.26
COMMD4-213ENST00000565834 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.45□□□□□ -0.26
COMMD4-213ENST00000565834 HIST1H2BHQ93079 126 aa13.45□□□□□ -0.26
COMMD4-213ENST00000565834 C12orf57Q99622 126 aa13.45□□□□□ -0.26
COMMD4-213ENST00000565834 HIST1H2BNQ99877 126 aa13.45□□□□□ -0.26
COMMD4-213ENST00000565834 HIST1H2BMQ99879 126 aa13.45□□□□□ -0.26
COMMD4-213ENST00000565834 OVOL2Q9BRP0 275 aa13.45□□□□□ -0.26
COMMD4-213ENST00000565834 MGPP08493 103 aa13.44□□□□□ -0.26
COMMD4-213ENST00000565834 FAM74A4Q5TZK3 123 aa13.44□□□□□ -0.26
COMMD4-213ENST00000565834 Q6ZTI0 123 aa13.44□□□□□ -0.26
COMMD4-213ENST00000565834 KIF25-AS1Q9Y6Z4 181 aa13.44□□□□□ -0.26
COMMD4-213ENST00000565834 NACAE9PAV3 2078 aa13.44□□□□□ -0.26
COMMD4-213ENST00000565834 IGHV4-28A0A0C4DH34 117 aa13.44□□□□□ -0.26
COMMD4-213ENST00000565834 SRIP30626 198 aa13.44□□□□□ -0.26
COMMD4-213ENST00000565834 SAMD10Q9BYL1 202 aa13.44□□□□□ -0.26
COMMD4-213ENST00000565834 RETNQ9HD89 108 aa13.44□□□□□ -0.26
COMMD4-213ENST00000565834 D6R8Y8 96 aa13.43□□□□□ -0.26
COMMD4-213ENST00000565834 CRYGDP07320 174 aa13.43□□□□□ -0.26
COMMD4-213ENST00000565834 Q8NAQ8 132 aa13.43□□□□□ -0.26
COMMD4-213ENST00000565834 CKS2P33552 79 aa13.42□□□□□ -0.26
COMMD4-213ENST00000565834 ORMDL3Q8N138 153 aa13.42□□□□□ -0.26
COMMD4-213ENST00000565834 ALKBH7Q9BT30 221 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-213ENST00000565834 HOXA5P20719 270 aa13.41□□□□□ -0.26
COMMD4-213ENST00000565834 LINC00315P59091 139 aa13.41□□□□□ -0.26
COMMD4-213ENST00000565834 CFAP126Q5VTH2 177 aa13.41□□□□□ -0.26
COMMD4-213ENST00000565834 SBSPONQ8IVN8 264 aa13.41□□□□□ -0.26
COMMD4-213ENST00000565834 GAGE12BA1L429 117 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 RS1O15537 224 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 GAGE7O76087 117 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 PPBPP02775 128 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 GAGE12FP0CL80 117 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 GAGE12GP0CL81 117 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 GAGE12IP0CL82 117 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 MRAP2Q96G30 205 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 U3KQK5 164 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 TRAV26-2A0A0B4J265 109 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 F5H697 171 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 SMKR1H3BMG3 65 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 DEFB4AO15263 64 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 NCR2O95944 276 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 ZNF56Q15929 161 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 POM121L12Q8N7R1 296 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 PRELID3AQ96N28 172 aa13.4□□□□□ -0.26
COMMD4-213ENST00000565834 TRGV2A0A075B6R0 118 aa13.39□□□□□ -0.27
COMMD4-213ENST00000565834 RHODO00212 210 aa13.39□□□□□ -0.27
COMMD4-213ENST00000565834 OR4C5Q8NGB2 326 aa13.39□□□□□ -0.27
COMMD4-213ENST00000565834 MRAPQ8TCY5 172 aa13.39□□□□□ -0.27
COMMD4-213ENST00000565834 TRAV4A0A0B4J268 109 aa13.38□□□□□ -0.27
COMMD4-213ENST00000565834 LYRM9A8MSI8 78 aa13.38□□□□□ -0.27
COMMD4-213ENST00000565834 SPATA25Q9BR10 227 aa13.38□□□□□ -0.27
COMMD4-213ENST00000565834 IGHV3-73A0A0B4J1V6 119 aa13.37□□□□□ -0.27
COMMD4-213ENST00000565834 FAM222AQ5U5X8 452 aa13.37□□□□□ -0.27
COMMD4-213ENST00000565834 UFSP1Q6NVU6 142 aa13.37□□□□□ -0.27
COMMD4-213ENST00000565834 GAS8-AS1O95177 125 aa13.37□□□□□ -0.27
COMMD4-213ENST00000565834 S100A2P29034 98 aa13.37□□□□□ -0.27
COMMD4-213ENST00000565834 NDUFA6P56556 154 aa13.37□□□□□ -0.27
COMMD4-213ENST00000565834 OR10J3Q5JRS4 329 aa13.37□□□□□ -0.27
COMMD4-213ENST00000565834 SUMO4Q6EEV6 95 aa13.37□□□□□ -0.27
COMMD4-213ENST00000565834 ZFP2Q6ZN57 461 aa13.37□□□□□ -0.27
COMMD4-213ENST00000565834 LINC00612Q8N6U2 182 aa13.37□□□□□ -0.27
COMMD4-213ENST00000565834 C18orf32Q8TCD1 76 aa13.37□□□□□ -0.27
COMMD4-213ENST00000565834 NPYP01303 97 aa13.36□□□□□ -0.27
COMMD4-213ENST00000565834 DEFB130BP0DP73 79 aa13.36□□□□□ -0.27
COMMD4-213ENST00000565834 DEFB130AP0DP74 79 aa13.36□□□□□ -0.27
COMMD4-213ENST00000565834 GATA1P15976 413 aaPredicted RBP13.36□□□□□ -0.27
COMMD4-213ENST00000565834 TM2D3Q9BRN9 247 aa13.36□□□□□ -0.27
COMMD4-213ENST00000565834 DKK2Q9UBU2 259 aa13.36□□□□□ -0.27
COMMD4-213ENST00000565834 LAMTOR2Q9Y2Q5 125 aa13.36□□□□□ -0.27
COMMD4-213ENST00000565834 Q0VG73 95 aa13.35□□□□□ -0.27
COMMD4-213ENST00000565834 ZNF479Q96JC4 524 aa13.35□□□□□ -0.27
COMMD4-213ENST00000565834 TNFRSF6BO95407 300 aa13.34□□□□□ -0.27
COMMD4-213ENST00000565834 IGHV3-53P01767 116 aa13.34□□□□□ -0.27
COMMD4-213ENST00000565834 IQCJQ1A5X6 159 aa13.34□□□□□ -0.27
COMMD4-213ENST00000565834 BAGE3Q86Y29 109 aa13.34□□□□□ -0.27
COMMD4-213ENST00000565834 NRACQ8N912 160 aa13.34□□□□□ -0.27
COMMD4-213ENST00000565834 C18orf15Q96N68 181 aa13.34□□□□□ -0.27
COMMD4-213ENST00000565834 TENM3Q9P273 2699 aa13.33□□□□□ -0.27
COMMD4-213ENST00000565834 CIDEAO60543 219 aa13.33□□□□□ -0.28
COMMD4-213ENST00000565834 PPP1R17O96001 155 aa13.33□□□□□ -0.28
COMMD4-213ENST00000565834 SPART-AS1P0CW21 52 aa13.33□□□□□ -0.28
COMMD4-213ENST00000565834 C11orf68Q9H3H3 251 aaKnown RBP13.33□□□□□ -0.28
COMMD4-213ENST00000565834 CELA1Q9UNI1 258 aa13.33□□□□□ -0.28
COMMD4-213ENST00000565834 TEX48A0A1B0GUV7 120 aa13.32□□□□□ -0.28
COMMD4-213ENST00000565834 H7C1H1 209 aa13.32□□□□□ -0.28
COMMD4-213ENST00000565834 M0QY20 66 aa13.32□□□□□ -0.28
COMMD4-213ENST00000565834 RPL39LQ96EH5 51 aaKnown RBP13.32□□□□□ -0.28
COMMD4-213ENST00000565834 DAD1P61803 113 aa13.31□□□□□ -0.28
COMMD4-213ENST00000565834 COA6Q5JTJ3 125 aaKnown RBP13.31□□□□□ -0.28
COMMD4-213ENST00000565834 Q6ZSN1 163 aa13.31□□□□□ -0.28
COMMD4-213ENST00000565834 MAP1LC3AQ9H492 121 aa13.31□□□□□ -0.28
COMMD4-213ENST00000565834 EDA2RQ9HAV5 297 aa13.31□□□□□ -0.28
COMMD4-213ENST00000565834 ZMAT4Q9H898 229 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms