RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 S100PP25815 95 aa13.12□□□□□ -0.31
NME3-207ENST00000564628 MAPKAPK5-AS1Q8N8E1 139 aa13.12□□□□□ -0.31
NME3-207ENST00000564628 XKRY2A2RUG3 117 aa13.11□□□□□ -0.31
NME3-207ENST00000564628 SH2D1AO60880 128 aa13.11□□□□□ -0.31
NME3-207ENST00000564628 CT83Q5H943 113 aa13.11□□□□□ -0.31
NME3-207ENST00000564628 KCNIP4Q6PIL6 250 aa13.11□□□□□ -0.31
NME3-207ENST00000564628 VSIG2Q96IQ7 327 aa13.11□□□□□ -0.31
NME3-207ENST00000564628 RPP21Q9H633 154 aaKnown RBP13.11□□□□□ -0.31
NME3-207ENST00000564628 LRP1BQ9NZR2 4599 aa13.11□□□□□ -0.31
NME3-207ENST00000564628 A8MWL6 223 aa13.1□□□□□ -0.31
NME3-207ENST00000564628 RNASE3P12724 160 aaKnown RBP13.1□□□□□ -0.31
NME3-207ENST00000564628 RPS20P60866 119 aaKnown RBP13.1□□□□□ -0.31
NME3-207ENST00000564628 V9GYV3 84 aa13.1□□□□□ -0.31
NME3-207ENST00000564628 A0A0J9YY99 117 aa13.09□□□□□ -0.31
NME3-207ENST00000564628 NUDT3O95989 172 aa13.09□□□□□ -0.31
NME3-207ENST00000564628 CCL18P55774 89 aa13.09□□□□□ -0.31
NME3-207ENST00000564628 FHL2Q14192 279 aa13.09□□□□□ -0.31
NME3-207ENST00000564628 DNLZQ5SXM8 178 aa13.09□□□□□ -0.31
NME3-207ENST00000564628 OR2D3Q8NGH3 330 aa13.09□□□□□ -0.31
NME3-207ENST00000564628 PTH2Q96A98 100 aa13.09□□□□□ -0.31
NME3-207ENST00000564628 BTF3L4Q96K17 158 aa13.09□□□□□ -0.31
NME3-207ENST00000564628 IL36BQ9NZH7 164 aa13.09□□□□□ -0.31
NME3-207ENST00000564628 TRAV4A0A0B4J268 109 aa13.08□□□□□ -0.32
NME3-207ENST00000564628 FAM231BA6NCW3 169 aa13.08□□□□□ -0.32
NME3-207ENST00000564628 SCO1O75880 301 aa13.08□□□□□ -0.32
NME3-207ENST00000564628 IGHV3-53P01767 116 aa13.08□□□□□ -0.32
NME3-207ENST00000564628 ORM1P02763 201 aa13.08□□□□□ -0.32
NME3-207ENST00000564628 RPL19P84098 196 aaKnown RBP13.08□□□□□ -0.32
NME3-207ENST00000564628 TSKUQ8WUA8 353 aa13.08□□□□□ -0.32
NME3-207ENST00000564628 LINC01559Q495D7 138 aa13.07□□□□□ -0.32
NME3-207ENST00000564628 Q8N1X5 172 aa13.07□□□□□ -0.32
NME3-207ENST00000564628 ZNF479Q96JC4 524 aa13.07□□□□□ -0.32
NME3-207ENST00000564628 GFRA4Q9GZZ7 299 aa13.07□□□□□ -0.32
NME3-207ENST00000564628 LINC00588Q9Y4M8 146 aa13.07□□□□□ -0.32
NME3-207ENST00000564628 TRAV9-1A0A075B6T8 112 aa13.06□□□□□ -0.32
NME3-207ENST00000564628 CRYBA4P53673 196 aa13.06□□□□□ -0.32
NME3-207ENST00000564628 SLAQ13239 276 aa13.06□□□□□ -0.32
NME3-207ENST00000564628 PRO0255Q9UI72 69 aa13.06□□□□□ -0.32
NME3-207ENST00000564628 A0A096LPF7 62 aa13.05□□□□□ -0.32
NME3-207ENST00000564628 ASIPP42127 132 aa13.05□□□□□ -0.32
NME3-207ENST00000564628 ZNF876PQ49A33 203 aa13.05□□□□□ -0.32
NME3-207ENST00000564628 CBLN2Q8IUK8 224 aa13.05□□□□□ -0.32
NME3-207ENST00000564628 NAT8BQ9UHF3 227 aa13.05□□□□□ -0.32
NME3-207ENST00000564628 SMIM27A0A1W2PRY6 76 aa13.04□□□□□ -0.32
NME3-207ENST00000564628 PIK3CD-AS1Q5SR53 167 aa13.04□□□□□ -0.32
NME3-207ENST00000564628 OR4C5Q8NGB2 326 aa13.04□□□□□ -0.32
NME3-207ENST00000564628 HHLA3Q9XRX5 114 aa13.04□□□□□ -0.32
NME3-207ENST00000564628 PAX4O43316 350 aa13.03□□□□□ -0.32
NME3-207ENST00000564628 FOXA3P55318 350 aaPredicted RBP13.03□□□□□ -0.32
NME3-207ENST00000564628 URGCP-MRPS24S4R325 110 aa13.03□□□□□ -0.32
NME3-207ENST00000564628 APOBP04114 4563 aaKnown RBP13.02□□□□□ -0.32
NME3-207ENST00000564628 TRGV4A0A0C4DH28 118 aa13.02□□□□□ -0.33
NME3-207ENST00000564628 A0A1W2PPQ1 181 aa13.02□□□□□ -0.33
NME3-207ENST00000564628 H3BVH4 76 aa13.02□□□□□ -0.33
NME3-207ENST00000564628 RS1O15537 224 aa13.02□□□□□ -0.33
NME3-207ENST00000564628 CXCL1P09341 107 aa13.02□□□□□ -0.33
NME3-207ENST00000564628 S100A4P26447 101 aaKnown RBP13.02□□□□□ -0.33
NME3-207ENST00000564628 ELOBQ15370 118 aa13.02□□□□□ -0.33
NME3-207ENST00000564628 CFAP126Q5VTH2 177 aa13.02□□□□□ -0.33
NME3-207ENST00000564628 Q9H8V8 135 aa13.02□□□□□ -0.33
NME3-207ENST00000564628 SCRT2Q9NQ03 307 aa13.02□□□□□ -0.33
NME3-207ENST00000564628 TMSB15BA0A087X1C1 80 aa13.01□□□□□ -0.33
NME3-207ENST00000564628 TTC32Q5I0X7 151 aa13.01□□□□□ -0.33
NME3-207ENST00000564628 SPATA12Q7Z6I5 190 aa13.01□□□□□ -0.33
NME3-207ENST00000564628 BORCS7Q96B45 105 aa13.01□□□□□ -0.33
NME3-207ENST00000564628 TRBV24-1A0A075B6N3 115 aa13□□□□□ -0.33
NME3-207ENST00000564628 GRIFINA4D1Z8 144 aa13□□□□□ -0.33
NME3-207ENST00000564628 HIGD1CA8MV81 97 aa13□□□□□ -0.33
NME3-207ENST00000564628 CIDEAO60543 219 aa13□□□□□ -0.33
NME3-207ENST00000564628 ARMS2P0C7Q2 107 aa13□□□□□ -0.33
NME3-207ENST00000564628 GATA1P15976 413 aaPredicted RBP13□□□□□ -0.33
NME3-207ENST00000564628 ESRGQ1W209 222 aa13□□□□□ -0.33
NME3-207ENST00000564628 ICOSQ9Y6W8 199 aa13□□□□□ -0.33
NME3-207ENST00000564628 F2Z2F3 143 aa12.99□□□□□ -0.33
NME3-207ENST00000564628 NUP35Q8NFH5 326 aa12.99□□□□□ -0.33
NME3-207ENST00000564628 UPK3BQ9BT76 320 aa12.99□□□□□ -0.33
NME3-207ENST00000564628 DNAH5Q8TE73 4624 aa12.99□□□□□ -0.33
NME3-207ENST00000564628 COLCA2A8K830 154 aa12.98□□□□□ -0.33
NME3-207ENST00000564628 GZMBP10144 247 aa12.98□□□□□ -0.33
NME3-207ENST00000564628 BTF3P20290 206 aaKnown RBP12.98□□□□□ -0.33
NME3-207ENST00000564628 COX19Q49B96 90 aa12.98□□□□□ -0.33
NME3-207ENST00000564628 FER1L6-AS1Q8NA97 138 aa12.98□□□□□ -0.33
NME3-207ENST00000564628 GTSF1Q8WW33 167 aa12.98□□□□□ -0.33
NME3-207ENST00000564628 MRPS16Q9Y3D3 137 aaKnown RBP12.98□□□□□ -0.33
NME3-207ENST00000564628 A8MWV9 139 aa12.97□□□□□ -0.33
NME3-207ENST00000564628 K7EQD1 137 aa12.97□□□□□ -0.33
NME3-207ENST00000564628 MRPL23Q16540 153 aaKnown RBP12.97□□□□□ -0.33
NME3-207ENST00000564628 PGLYRP4Q96LB8 373 aa12.97□□□□□ -0.33
NME3-207ENST00000564628 YPEL4Q96NS1 127 aa12.97□□□□□ -0.33
NME3-207ENST00000564628 KRTAP1-5Q9BYS1 174 aa12.97□□□□□ -0.33
NME3-207ENST00000564628 TGIF2-C20orf24A0A0A6YYL0 155 aa12.96□□□□□ -0.33
NME3-207ENST00000564628 IGLC6P0CF74 106 aa12.96□□□□□ -0.33
NME3-207ENST00000564628 GYPEP15421 78 aa12.96□□□□□ -0.33
NME3-207ENST00000564628 DMRTA1Q5VZB9 504 aa12.96□□□□□ -0.33
NME3-207ENST00000564628 UFSP1Q6NVU6 142 aa12.96□□□□□ -0.33
NME3-207ENST00000564628 RASL11AQ6T310 242 aa12.96□□□□□ -0.33
NME3-207ENST00000564628 ZFP2Q6ZN57 461 aa12.96□□□□□ -0.33
NME3-207ENST00000564628 ATP5L2Q7Z4Y8 100 aa12.96□□□□□ -0.33
NME3-207ENST00000564628 A0A1B0GUT8 65 aa12.95□□□□□ -0.34
NME3-207ENST00000564628 A0A1B0GW15 77 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms