RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 JPT2Q9H910 190 aa9.37□□□□□ -0.91
CNOT1-206ENST00000564557 BIRC6Q9NR09 4857 aa9.36□□□□□ -0.91
CNOT1-206ENST00000564557 CXCL1P09341 107 aa9.36□□□□□ -0.91
CNOT1-206ENST00000564557 RPS20P60866 119 aaKnown RBP9.36□□□□□ -0.91
CNOT1-206ENST00000564557 OR10J3Q5JRS4 329 aa9.36□□□□□ -0.91
CNOT1-206ENST00000564557 SPANXN1Q5VSR9 72 aa9.36□□□□□ -0.91
CNOT1-206ENST00000564557 ATP6V0E2Q8NHE4 81 aa9.36□□□□□ -0.91
CNOT1-206ENST00000564557 SFRP2Q96HF1 295 aa9.36□□□□□ -0.91
CNOT1-206ENST00000564557 SCRT2Q9NQ03 307 aa9.36□□□□□ -0.91
CNOT1-206ENST00000564557 A0A087WWL8 130 aa9.35□□□□□ -0.91
CNOT1-206ENST00000564557 XKRY2A2RUG3 117 aa9.35□□□□□ -0.91
CNOT1-206ENST00000564557 GAGE12JA6NER3 117 aa9.35□□□□□ -0.91
CNOT1-206ENST00000564557 K7EP13 123 aa9.35□□□□□ -0.91
CNOT1-206ENST00000564557 TIRAPP58753 221 aa9.35□□□□□ -0.91
CNOT1-206ENST00000564557 SSTP61278 116 aa9.35□□□□□ -0.91
CNOT1-206ENST00000564557 GAGE1Q13065 139 aa9.35□□□□□ -0.91
CNOT1-206ENST00000564557 GAGE4Q13068 117 aa9.35□□□□□ -0.91
CNOT1-206ENST00000564557 GAGE5Q13069 117 aa9.35□□□□□ -0.91
CNOT1-206ENST00000564557 GAGE13Q4V321 117 aa9.35□□□□□ -0.91
CNOT1-206ENST00000564557 SAMD10Q9BYL1 202 aa9.35□□□□□ -0.91
CNOT1-206ENST00000564557 FRAS1Q86XX4 4008 aa9.35□□□□□ -0.91
CNOT1-206ENST00000564557 RBFOX3A6NFN3 312 aa9.34□□□□□ -0.91
CNOT1-206ENST00000564557 P01737 135 aa9.34□□□□□ -0.91
CNOT1-206ENST00000564557 SMIM17P0DL12 118 aa9.34□□□□□ -0.91
CNOT1-206ENST00000564557 NFE4Q86UQ8 179 aa9.34□□□□□ -0.91
CNOT1-206ENST00000564557 WFDC10BQ8IUB3 73 aa9.34□□□□□ -0.91
CNOT1-206ENST00000564557 OR2D3Q8NGH3 330 aa9.34□□□□□ -0.91
CNOT1-206ENST00000564557 TPPP3Q9BW30 176 aa9.34□□□□□ -0.91
CNOT1-206ENST00000564557 KRTAP1-5Q9BYS1 174 aa9.34□□□□□ -0.91
CNOT1-206ENST00000564557 GTSF1LQ9H1H1 148 aa9.34□□□□□ -0.91
CNOT1-206ENST00000564557 IGHV3-38A0A0C4DH36 116 aa9.33□□□□□ -0.92
CNOT1-206ENST00000564557 A0A1B0GVY2 172 aa9.33□□□□□ -0.92
CNOT1-206ENST00000564557 OR5AL1P0C617 328 aa9.33□□□□□ -0.92
CNOT1-206ENST00000564557 LINC00315P59091 139 aa9.33□□□□□ -0.92
CNOT1-206ENST00000564557 Q6ZSN1 163 aa9.33□□□□□ -0.92
CNOT1-206ENST00000564557 C10orf126Q8N4M7 172 aa9.33□□□□□ -0.92
CNOT1-206ENST00000564557 OR10AG1Q8NH19 301 aa9.33□□□□□ -0.92
CNOT1-206ENST00000564557 EIF5A2Q9GZV4 153 aaKnown RBP9.33□□□□□ -0.92
CNOT1-206ENST00000564557 MUC21A0A0G2JKD1 596 aa9.32□□□□□ -0.92
CNOT1-206ENST00000564557 MUC21A0A140T8X8 626 aa9.32□□□□□ -0.92
CNOT1-206ENST00000564557 F5H697 171 aa9.32□□□□□ -0.92
CNOT1-206ENST00000564557 SNAI2O43623 268 aa9.32□□□□□ -0.92
CNOT1-206ENST00000564557 CRYGDP07320 174 aa9.32□□□□□ -0.92
CNOT1-206ENST00000564557 CEBPGP53567 150 aa9.32□□□□□ -0.92
CNOT1-206ENST00000564557 ZNF56Q15929 161 aa9.32□□□□□ -0.92
CNOT1-206ENST00000564557 LELP1Q5T871 98 aa9.32□□□□□ -0.92
CNOT1-206ENST00000564557 UFSP1Q6NVU6 142 aa9.32□□□□□ -0.92
CNOT1-206ENST00000564557 ZNF575Q86XF7 245 aa9.32□□□□□ -0.92
CNOT1-206ENST00000564557 C14orf178Q8N769 122 aaPredicted RBP9.32□□□□□ -0.92
CNOT1-206ENST00000564557 IGLV2-8P01709 118 aa9.31□□□□□ -0.92
CNOT1-206ENST00000564557 DNAH10OSP0CZ25 163 aa9.31□□□□□ -0.92
CNOT1-206ENST00000564557 RPL36AP83881 106 aaKnown RBP9.31□□□□□ -0.92
CNOT1-206ENST00000564557 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.31□□□□□ -0.92
CNOT1-206ENST00000564557 FER1L6-AS1Q8NA97 138 aa9.31□□□□□ -0.92
CNOT1-206ENST00000564557 RPL36ALQ969Q0 106 aaKnown RBP9.31□□□□□ -0.92
CNOT1-206ENST00000564557 A0A087WWC5 75 aa9.3□□□□□ -0.92
CNOT1-206ENST00000564557 TRBV10-1A0A0K0K1A3 114 aa9.3□□□□□ -0.92
CNOT1-206ENST00000564557 TMEM250H0YL14 139 aa9.3□□□□□ -0.92
CNOT1-206ENST00000564557 GZMBP10144 247 aa9.3□□□□□ -0.92
CNOT1-206ENST00000564557 RAB4BP61018 213 aa9.3□□□□□ -0.92
CNOT1-206ENST00000564557 CACNG7P62955 275 aa9.3□□□□□ -0.92
CNOT1-206ENST00000564557 TOR2AQ5JU69 321 aa9.3□□□□□ -0.92
CNOT1-206ENST00000564557 Q8N3U1 123 aa9.3□□□□□ -0.92
CNOT1-206ENST00000564557 AP1S3Q96PC3 154 aa9.3□□□□□ -0.92
CNOT1-206ENST00000564557 MSRB1Q9NZV6 116 aa9.3□□□□□ -0.92
CNOT1-206ENST00000564557 DNAH2Q9P225 4427 aa9.29□□□□□ -0.92
CNOT1-206ENST00000564557 C19orf71A6NCJ1 209 aa9.29□□□□□ -0.92
CNOT1-206ENST00000564557 F2Z2F3 143 aa9.29□□□□□ -0.92
CNOT1-206ENST00000564557 LYPD6BQ8NI32 183 aa9.29□□□□□ -0.92
CNOT1-206ENST00000564557 TRBV20OR9-2A0A075B6H5 130 aa9.28□□□□□ -0.92
CNOT1-206ENST00000564557 IGHV3-30P01768 117 aa9.28□□□□□ -0.92
CNOT1-206ENST00000564557 IGHV3-33P01772 117 aa9.28□□□□□ -0.92
CNOT1-206ENST00000564557 IGHV3-30-3P0DP02 117 aa9.28□□□□□ -0.92
CNOT1-206ENST00000564557 IGHV3-30-5P0DP03 117 aa9.28□□□□□ -0.92
CNOT1-206ENST00000564557 LINC01556Q5JQF7 62 aa9.28□□□□□ -0.92
CNOT1-206ENST00000564557 KCNIP4Q6PIL6 250 aa9.28□□□□□ -0.92
CNOT1-206ENST00000564557 NUDT10Q8NFP7 164 aa9.28□□□□□ -0.92
CNOT1-206ENST00000564557 OCC1Q8TAD7 63 aa9.28□□□□□ -0.92
CNOT1-206ENST00000564557 NUDT11Q96G61 164 aa9.28□□□□□ -0.92
CNOT1-206ENST00000564557 URGCP-MRPS24S4R325 110 aa9.28□□□□□ -0.92
CNOT1-206ENST00000564557 TRBV7-3A0A075B6L6 115 aa9.27□□□□□ -0.93
CNOT1-206ENST00000564557 PSCAO43653 123 aa9.27□□□□□ -0.93
CNOT1-206ENST00000564557 IGLC6P0CF74 106 aa9.27□□□□□ -0.93
CNOT1-206ENST00000564557 ERVFC1-1P60608 527 aa9.27□□□□□ -0.93
CNOT1-206ENST00000564557 TNFRSF18Q9Y5U5 241 aa9.27□□□□□ -0.93
CNOT1-206ENST00000564557 DNAH17Q9UFH2 4485 aa9.26□□□□□ -0.93
CNOT1-206ENST00000564557 C16orf90A8MZG2 172 aa9.26□□□□□ -0.93
CNOT1-206ENST00000564557 MGPP08493 103 aa9.26□□□□□ -0.93
CNOT1-206ENST00000564557 TRGC1P0CF51 173 aa9.26□□□□□ -0.93
CNOT1-206ENST00000564557 LYZL1Q6UWQ5 148 aa9.26□□□□□ -0.93
CNOT1-206ENST00000564557 SPATA12Q7Z6I5 190 aa9.26□□□□□ -0.93
CNOT1-206ENST00000564557 FAM210AQ96ND0 272 aa9.26□□□□□ -0.93
CNOT1-206ENST00000564557 RNASE7Q9H1E1 156 aaKnown RBP9.26□□□□□ -0.93
CNOT1-206ENST00000564557 RPP21Q9H633 154 aaKnown RBP9.26□□□□□ -0.93
CNOT1-206ENST00000564557 Q9UF83 564 aa9.26□□□□□ -0.93
CNOT1-206ENST00000564557 H7C1H1 209 aa9.25□□□□□ -0.93
CNOT1-206ENST00000564557 GATCO43716 136 aaKnown RBP9.25□□□□□ -0.93
CNOT1-206ENST00000564557 LINC00694P0DN24 101 aa9.25□□□□□ -0.93
CNOT1-206ENST00000564557 SMIM7Q9BQ49 75 aa9.25□□□□□ -0.93
CNOT1-206ENST00000564557 FAT2Q9NYQ8 4349 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms