RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 RNASE8Q8TDE3 154 aaKnown RBP9.31□□□□□ -0.92
SPG7-209ENST00000564047 C16orf74Q96GX8 76 aa9.31□□□□□ -0.92
SPG7-209ENST00000564047 PGLYRP4Q96LB8 373 aa9.31□□□□□ -0.92
SPG7-209ENST00000564047 OVOL2Q9BRP0 275 aa9.31□□□□□ -0.92
SPG7-209ENST00000564047 SSBP4Q9BWG4 385 aaPredicted RBP9.31□□□□□ -0.92
SPG7-209ENST00000564047 MDFICQ9P1T7 246 aa9.31□□□□□ -0.92
SPG7-209ENST00000564047 A0A1B0GUT8 65 aa9.3□□□□□ -0.92
SPG7-209ENST00000564047 SNAI2O43623 268 aa9.3□□□□□ -0.92
SPG7-209ENST00000564047 OR5AL1P0C617 328 aa9.3□□□□□ -0.92
SPG7-209ENST00000564047 MIFP14174 115 aa9.3□□□□□ -0.92
SPG7-209ENST00000564047 CAMPP49913 170 aa9.3□□□□□ -0.92
SPG7-209ENST00000564047 C11orf72Q8NBR9 251 aa9.3□□□□□ -0.92
SPG7-209ENST00000564047 C9orf85Q96MD7 179 aa9.3□□□□□ -0.92
SPG7-209ENST00000564047 SPATA25Q9BR10 227 aa9.3□□□□□ -0.92
SPG7-209ENST00000564047 TM2D3Q9BRN9 247 aa9.3□□□□□ -0.92
SPG7-209ENST00000564047 SCRT2Q9NQ03 307 aa9.3□□□□□ -0.92
SPG7-209ENST00000564047 H3BVH4 76 aa9.29□□□□□ -0.92
SPG7-209ENST00000564047 SCGB1D1O95968 90 aa9.29□□□□□ -0.92
SPG7-209ENST00000564047 RAB4AP20338 218 aa9.29□□□□□ -0.92
SPG7-209ENST00000564047 CTRLP40313 264 aa9.29□□□□□ -0.92
SPG7-209ENST00000564047 AMTP48728 403 aa9.29□□□□□ -0.92
SPG7-209ENST00000564047 IL17DQ8TAD2 202 aa9.29□□□□□ -0.92
SPG7-209ENST00000564047 BORCS7Q96B45 105 aa9.29□□□□□ -0.92
SPG7-209ENST00000564047 B9D2Q9BPU9 175 aa9.29□□□□□ -0.92
SPG7-209ENST00000564047 SPXQ9BT56 116 aa9.29□□□□□ -0.92
SPG7-209ENST00000564047 TPPP3Q9BW30 176 aa9.29□□□□□ -0.92
SPG7-209ENST00000564047 PLAC8L1A1L4L8 177 aa9.28□□□□□ -0.92
SPG7-209ENST00000564047 DDTP30046 118 aa9.28□□□□□ -0.92
SPG7-209ENST00000564047 LYZL1Q6UWQ5 148 aa9.28□□□□□ -0.92
SPG7-209ENST00000564047 TEX43Q6ZNM6 134 aa9.28□□□□□ -0.92
SPG7-209ENST00000564047 ZNF664Q8N3J9 261 aa9.28□□□□□ -0.92
SPG7-209ENST00000564047 RETNQ9HD89 108 aa9.28□□□□□ -0.92
SPG7-209ENST00000564047 IGHV4-28A0A0C4DH34 117 aa9.27□□□□□ -0.93
SPG7-209ENST00000564047 CACNG7P62955 275 aa9.27□□□□□ -0.93
SPG7-209ENST00000564047 DAZ2Q13117 558 aaKnown RBP9.27□□□□□ -0.93
SPG7-209ENST00000564047 Q8NAQ8 132 aa9.27□□□□□ -0.93
SPG7-209ENST00000564047 PTH2Q96A98 100 aa9.27□□□□□ -0.93
SPG7-209ENST00000564047 CHCHD1Q96BP2 118 aaKnown RBP9.27□□□□□ -0.93
SPG7-209ENST00000564047 CNFNQ9BYD5 112 aa9.27□□□□□ -0.93
SPG7-209ENST00000564047 PHLDA3Q9Y5J5 127 aa9.27□□□□□ -0.93
SPG7-209ENST00000564047 TIMM8BQ9Y5J9 83 aaPredicted RBP9.27□□□□□ -0.93
SPG7-209ENST00000564047 TENM2Q9NT68 2774 aa9.26□□□□□ -0.93
SPG7-209ENST00000564047 IGHV4-4A0A075B6R2 117 aa9.26□□□□□ -0.93
SPG7-209ENST00000564047 M0R2P5 195 aa9.26□□□□□ -0.93
SPG7-209ENST00000564047 PMCHP20382 165 aa9.26□□□□□ -0.93
SPG7-209ENST00000564047 NIT1Q86X76 327 aa9.26□□□□□ -0.93
SPG7-209ENST00000564047 OR10AG1Q8NH19 301 aa9.26□□□□□ -0.93
SPG7-209ENST00000564047 ZMAT4Q9H898 229 aa9.26□□□□□ -0.93
SPG7-209ENST00000564047 LYSTQ99698 3801 aa9.25□□□□□ -0.93
SPG7-209ENST00000564047 HSBP1O75506 76 aa9.25□□□□□ -0.93
SPG7-209ENST00000564047 NXPH4O95158 308 aa9.25□□□□□ -0.93
SPG7-209ENST00000564047 LGALS9BQ3B8N2 356 aa9.25□□□□□ -0.93
SPG7-209ENST00000564047 PIK3CD-AS1Q5SR53 167 aa9.25□□□□□ -0.93
SPG7-209ENST00000564047 SPANXN1Q5VSR9 72 aa9.25□□□□□ -0.93
SPG7-209ENST00000564047 SYT8Q8NBV8 401 aa9.25□□□□□ -0.93
SPG7-209ENST00000564047 NDUFAF3Q9BU61 184 aa9.25□□□□□ -0.93
SPG7-209ENST00000564047 PRO1933Q9H354 126 aa9.25□□□□□ -0.93
SPG7-209ENST00000564047 DNAH7Q8WXX0 4024 aa9.24□□□□□ -0.93
SPG7-209ENST00000564047 M0R381 172 aa9.24□□□□□ -0.93
SPG7-209ENST00000564047 NHLRC4P0CG21 123 aaPredicted RBP9.24□□□□□ -0.93
SPG7-209ENST00000564047 NTF3P20783 257 aa9.24□□□□□ -0.93
SPG7-209ENST00000564047 ZNF876PQ49A33 203 aa9.24□□□□□ -0.93
SPG7-209ENST00000564047 RASL10AQ92737 203 aa9.24□□□□□ -0.93
SPG7-209ENST00000564047 NOP10Q9NPE3 64 aaKnown RBP9.24□□□□□ -0.93
SPG7-209ENST00000564047 DNAH1Q9P2D7 4330 aa9.24□□□□□ -0.93
SPG7-209ENST00000564047 MUC21A0A0G2JKD1 596 aa9.23□□□□□ -0.93
SPG7-209ENST00000564047 MUC21A0A140T8X8 626 aa9.23□□□□□ -0.93
SPG7-209ENST00000564047 LYRM9A8MSI8 78 aa9.23□□□□□ -0.93
SPG7-209ENST00000564047 C3orf84H3BNL1 204 aa9.23□□□□□ -0.93
SPG7-209ENST00000564047 EMP1P54849 157 aa9.23□□□□□ -0.93
SPG7-209ENST00000564047 TWIST1Q15672 202 aa9.23□□□□□ -0.93
SPG7-209ENST00000564047 Q8N976 141 aa9.23□□□□□ -0.93
SPG7-209ENST00000564047 C11orf68Q9H3H3 251 aaKnown RBP9.23□□□□□ -0.93
SPG7-209ENST00000564047 STAB2Q8WWQ8 2551 aa9.23□□□□□ -0.93
SPG7-209ENST00000564047 DEFB4AO15263 64 aa9.22□□□□□ -0.93
SPG7-209ENST00000564047 KRTDAPP60985 99 aa9.22□□□□□ -0.93
SPG7-209ENST00000564047 SSTP61278 116 aa9.22□□□□□ -0.93
SPG7-209ENST00000564047 RNASEKQ6P5S7 137 aaKnown RBP9.22□□□□□ -0.93
SPG7-209ENST00000564047 URB1-AS1Q96HZ7 61 aa9.22□□□□□ -0.93
SPG7-209ENST00000564047 C14orf144Q96I85 54 aa9.22□□□□□ -0.93
SPG7-209ENST00000564047 MRPL16Q9NX20 251 aaKnown RBP9.22□□□□□ -0.93
SPG7-209ENST00000564047 U3KQK5 164 aa9.22□□□□□ -0.93
SPG7-209ENST00000564047 TRGV1A0A0A0MS02 117 aa9.21□□□□□ -0.94
SPG7-209ENST00000564047 TEX48A0A1B0GUV7 120 aa9.21□□□□□ -0.94
SPG7-209ENST00000564047 C3orf79P0CE67 100 aa9.21□□□□□ -0.94
SPG7-209ENST00000564047 LBHQ53QV2 105 aaPredicted RBP9.21□□□□□ -0.94
SPG7-209ENST00000564047 FAM222AQ5U5X8 452 aa9.21□□□□□ -0.94
SPG7-209ENST00000564047 Q6ZTI0 123 aa9.21□□□□□ -0.94
SPG7-209ENST00000564047 MRPL52Q86TS9 123 aaKnown RBP9.21□□□□□ -0.94
SPG7-209ENST00000564047 LINC00612Q8N6U2 182 aa9.21□□□□□ -0.94
SPG7-209ENST00000564047 VAMP8Q9BV40 100 aa9.21□□□□□ -0.94
SPG7-209ENST00000564047 MSRB1Q9NZV6 116 aa9.21□□□□□ -0.94
SPG7-209ENST00000564047 DKK2Q9UBU2 259 aa9.21□□□□□ -0.94
SPG7-209ENST00000564047 A8MWV9 139 aa9.2□□□□□ -0.94
SPG7-209ENST00000564047 LINC00614P0C842 121 aa9.2□□□□□ -0.94
SPG7-209ENST00000564047 SPART-AS1P0CW21 52 aa9.2□□□□□ -0.94
SPG7-209ENST00000564047 PMCHL1Q16048 86 aa9.2□□□□□ -0.94
SPG7-209ENST00000564047 FAM104BQ5XKR9 115 aa9.2□□□□□ -0.94
SPG7-209ENST00000564047 SMIM15Q7Z3B0 74 aa9.2□□□□□ -0.94
SPG7-209ENST00000564047 FAM19A2Q8N3H0 131 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms