RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 CHCHD7Q9BUK0 85 aa13.7□□□□□ -0.22
HERC2-204ENST00000563945 TMEM262E9PQX1 116 aa13.69□□□□□ -0.22
HERC2-204ENST00000563945 M0R036 132 aa13.69□□□□□ -0.22
HERC2-204ENST00000563945 TPT1P13693 172 aaKnown RBP13.69□□□□□ -0.22
HERC2-204ENST00000563945 RPL36AP83881 106 aaKnown RBP13.69□□□□□ -0.22
HERC2-204ENST00000563945 Q0VG73 95 aa13.69□□□□□ -0.22
HERC2-204ENST00000563945 RPL36ALQ969Q0 106 aaKnown RBP13.69□□□□□ -0.22
HERC2-204ENST00000563945 A0A087WWL8 130 aa13.68□□□□□ -0.22
HERC2-204ENST00000563945 GRIFINA4D1Z8 144 aa13.68□□□□□ -0.22
HERC2-204ENST00000563945 PEX7O00628 323 aa13.68□□□□□ -0.22
HERC2-204ENST00000563945 OXTP01178 125 aa13.68□□□□□ -0.22
HERC2-204ENST00000563945 UBE2G2P60604 165 aa13.68□□□□□ -0.22
HERC2-204ENST00000563945 CIRBP-AS1Q8TBR5 109 aa13.68□□□□□ -0.22
HERC2-204ENST00000563945 AQP10Q96PS8 301 aa13.68□□□□□ -0.22
HERC2-204ENST00000563945 NKX6-2Q9C056 277 aaPredicted RBP13.68□□□□□ -0.22
HERC2-204ENST00000563945 KRBOX1C9JBD0 128 aa13.67□□□□□ -0.22
HERC2-204ENST00000563945 M0R381 172 aa13.67□□□□□ -0.22
HERC2-204ENST00000563945 HIST1H2BAQ96A08 127 aa13.67□□□□□ -0.22
HERC2-204ENST00000563945 DNAJC30Q96LL9 226 aa13.67□□□□□ -0.22
HERC2-204ENST00000563945 C1orf43Q9BWL3 253 aa13.67□□□□□ -0.22
HERC2-204ENST00000563945 CRPP02741 224 aa13.66□□□□□ -0.22
HERC2-204ENST00000563945 DNLZQ5SXM8 178 aa13.66□□□□□ -0.22
HERC2-204ENST00000563945 Q86TA4 180 aa13.66□□□□□ -0.22
HERC2-204ENST00000563945 SFRP2Q96HF1 295 aa13.66□□□□□ -0.22
HERC2-204ENST00000563945 ZFP30Q9Y2G7 519 aa13.66□□□□□ -0.22
HERC2-204ENST00000563945 BORCS7-ASMTA0A0B4J1R7 106 aa13.65□□□□□ -0.22
HERC2-204ENST00000563945 TRBV10-1A0A0K0K1A3 114 aa13.65□□□□□ -0.22
HERC2-204ENST00000563945 IGLV2-8P01709 118 aa13.65□□□□□ -0.22
HERC2-204ENST00000563945 UBE2G1P62253 170 aa13.65□□□□□ -0.22
HERC2-204ENST00000563945 FAM162BQ5T6X4 162 aa13.65□□□□□ -0.22
HERC2-204ENST00000563945 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.65□□□□□ -0.22
HERC2-204ENST00000563945 INO80EQ8NBZ0 244 aaPredicted RBP13.65□□□□□ -0.22
HERC2-204ENST00000563945 TMSB15BA0A087X1C1 80 aa13.64□□□□□ -0.23
HERC2-204ENST00000563945 CTXND1A0A1B0GTU2 59 aa13.64□□□□□ -0.23
HERC2-204ENST00000563945 SH2D1AO60880 128 aa13.64□□□□□ -0.23
HERC2-204ENST00000563945 ZFP82Q8N141 532 aa13.64□□□□□ -0.23
HERC2-204ENST00000563945 ALG5Q9Y673 324 aa13.64□□□□□ -0.23
HERC2-204ENST00000563945 TRBV7-3A0A075B6L6 115 aa13.63□□□□□ -0.23
HERC2-204ENST00000563945 CRIP1P50238 77 aa13.63□□□□□ -0.23
HERC2-204ENST00000563945 ZC2HC1AQ96GY0 325 aa13.63□□□□□ -0.23
HERC2-204ENST00000563945 MED28Q9H204 178 aa13.63□□□□□ -0.23
HERC2-204ENST00000563945 ATRAIDQ6UW56 229 aa13.62□□□□□ -0.23
HERC2-204ENST00000563945 FMC1Q96HJ9 113 aa13.62□□□□□ -0.23
HERC2-204ENST00000563945 FAM74A7A6NL05 159 aa13.61□□□□□ -0.23
HERC2-204ENST00000563945 UBE2D3P61077 147 aa13.61□□□□□ -0.23
HERC2-204ENST00000563945 UBE2D2P62837 147 aa13.61□□□□□ -0.23
HERC2-204ENST00000563945 AKR1C8PQ5T2L2 129 aa13.61□□□□□ -0.23
HERC2-204ENST00000563945 RPL7L1Q6DKI1 246 aaKnown RBP13.61□□□□□ -0.23
HERC2-204ENST00000563945 A6NHS1 94 aa13.6□□□□□ -0.23
HERC2-204ENST00000563945 ANGP03950 147 aaKnown RBP13.6□□□□□ -0.23
HERC2-204ENST00000563945 RPL37AP61513 92 aaKnown RBP13.6□□□□□ -0.23
HERC2-204ENST00000563945 C15orf54Q8N8G6 183 aa13.6□□□□□ -0.23
HERC2-204ENST00000563945 PLA2G2DQ9UNK4 145 aa13.6□□□□□ -0.23
HERC2-204ENST00000563945 TRBV6-8A0A0A6YYG3 113 aa13.59□□□□□ -0.23
HERC2-204ENST00000563945 PKIAP61925 76 aa13.59□□□□□ -0.23
HERC2-204ENST00000563945 ZNF56Q15929 161 aa13.59□□□□□ -0.23
HERC2-204ENST00000563945 ZNF726P1Q15940 193 aa13.59□□□□□ -0.23
HERC2-204ENST00000563945 LINC01559Q495D7 138 aa13.59□□□□□ -0.23
HERC2-204ENST00000563945 KRTAP10-4P60372 401 aaPredicted RBP13.58□□□□□ -0.24
HERC2-204ENST00000563945 RAB4BP61018 213 aa13.58□□□□□ -0.24
HERC2-204ENST00000563945 ZNF674Q2M3X9 581 aa13.58□□□□□ -0.24
HERC2-204ENST00000563945 COX8CQ7Z4L0 72 aa13.58□□□□□ -0.24
HERC2-204ENST00000563945 CHCHD5Q9BSY4 110 aa13.58□□□□□ -0.24
HERC2-204ENST00000563945 HLA-DQA1P01909 254 aa13.57□□□□□ -0.24
HERC2-204ENST00000563945 CST9LP1Q5W188 147 aa13.57□□□□□ -0.24
HERC2-204ENST00000563945 ENHOQ6UWT2 76 aa13.57□□□□□ -0.24
HERC2-204ENST00000563945 FXYD6-FXYD2A0A087WZ82 144 aa13.56□□□□□ -0.24
HERC2-204ENST00000563945 USP17L23D6RBM5 183 aa13.56□□□□□ -0.24
HERC2-204ENST00000563945 OR10G8Q8NGN5 311 aa13.56□□□□□ -0.24
HERC2-204ENST00000563945 STOML3Q8TAV4 291 aa13.56□□□□□ -0.24
HERC2-204ENST00000563945 PTTG1O95997 202 aa13.55□□□□□ -0.24
HERC2-204ENST00000563945 AKR1C3P42330 323 aa13.55□□□□□ -0.24
HERC2-204ENST00000563945 MPV17L2Q567V2 206 aa13.55□□□□□ -0.24
HERC2-204ENST00000563945 DGAT2L7PQ6IED9 249 aa13.55□□□□□ -0.24
HERC2-204ENST00000563945 TCEAL7Q9BRU2 100 aa13.55□□□□□ -0.24
HERC2-204ENST00000563945 TRBV6-1A0A0K0K1D8 114 aa13.54□□□□□ -0.24
HERC2-204ENST00000563945 MAP1LC3B2A6NCE7 125 aa13.54□□□□□ -0.24
HERC2-204ENST00000563945 F5H697 171 aa13.54□□□□□ -0.24
HERC2-204ENST00000563945 GIPP09681 153 aaPredicted RBP13.54□□□□□ -0.24
HERC2-204ENST00000563945 MIAQ16674 131 aa13.54□□□□□ -0.24
HERC2-204ENST00000563945 TMEM97Q5BJF2 176 aa13.54□□□□□ -0.24
HERC2-204ENST00000563945 Q5BKY6 102 aa13.54□□□□□ -0.24
HERC2-204ENST00000563945 ZNF471Q9BX82 626 aaPredicted RBP13.54□□□□□ -0.24
HERC2-204ENST00000563945 MAP1LC3BQ9GZQ8 125 aa13.54□□□□□ -0.24
HERC2-204ENST00000563945 LRP1Q07954 4544 aaKnown RBP13.54□□□□□ -0.24
HERC2-204ENST00000563945 LTAP01374 205 aa13.53□□□□□ -0.24
HERC2-204ENST00000563945 FHITP49789 147 aa13.52□□□□□ -0.25
HERC2-204ENST00000563945 NEXN-AS1Q8NBZ9 246 aa13.52□□□□□ -0.25
HERC2-204ENST00000563945 SPANXN1Q5VSR9 72 aa13.51□□□□□ -0.25
HERC2-204ENST00000563945 S100A9P06702 114 aaKnown RBP13.5□□□□□ -0.25
HERC2-204ENST00000563945 PRSS1P07477 247 aa13.5□□□□□ -0.25
HERC2-204ENST00000563945 SMIM17P0DL12 118 aa13.5□□□□□ -0.25
HERC2-204ENST00000563945 SSTP61278 116 aa13.49□□□□□ -0.25
HERC2-204ENST00000563945 PRR27Q6MZM9 219 aa13.49□□□□□ -0.25
HERC2-204ENST00000563945 C9orf163Q8N9P6 203 aa13.49□□□□□ -0.25
HERC2-204ENST00000563945 OR10AG1Q8NH19 301 aa13.49□□□□□ -0.25
HERC2-204ENST00000563945 RPL19P84098 196 aaKnown RBP13.48□□□□□ -0.25
HERC2-204ENST00000563945 CLPSL2Q6UWE3 100 aa13.48□□□□□ -0.25
HERC2-204ENST00000563945 DPH3Q96FX2 82 aa13.48□□□□□ -0.25
HERC2-204ENST00000563945 DERL1Q9BUN8 251 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms