RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 KIAA0556O60303 1618 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 LRP5O75197 1615 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 ABCA5Q8WWZ7 1642 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 MADDQ8WXG6 1647 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 PTPRDP23468 1912 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 UTRNP46939 3433 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 HIGD1CA8MV81 97 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 ZNF670-ZNF695F2Z2N8 137 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 J3QLW9 94 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 K7EIL1 84 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 IGF2P01344 180 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 APODP05090 189 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 ADCYAP1P18509 176 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 FGF7P21781 194 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 POLR2JP52435 117 aaKnown RBP0.68□□□□□ -2.3
LINC00557-201ENST00000563184 ADAMTS12P58397 1594 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 BTG2P78543 158 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 ARHGAP31Q2M1Z3 1444 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 UNQ5815/PRO19632Q6UWF5 114 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 LIMD2Q9BT23 127 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 LPAR5Q9H1C0 372 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 ATG5Q9H1Y0 275 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 MRPL35Q9NZE8 188 aaKnown RBP0.68□□□□□ -2.3
LINC00557-201ENST00000563184 MRPL36Q9P0J6 103 aaKnown RBP0.68□□□□□ -2.3
LINC00557-201ENST00000563184 PREX1Q8TCU6 1659 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 ATP7AQ04656 1500 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 ZFYVE16Q7Z3T8 1539 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 TMEM2Q9UHN6 1383 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 NKTRP30414 1462 aaKnown RBP0.67□□□□□ -2.3
LINC00557-201ENST00000563184 ARHGAP35Q9NRY4 1499 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 SETBP1Q9Y6X0 1596 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 TRANK1O15050 2925 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 ABCC5O15440 1437 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 C10orf71Q711Q0 1435 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 EP400Q96L91 3159 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 TRAV12-2A0A075B6T6 113 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 A0A0D9SG42 100 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 FAM236AA0A1B0GUQ0 79 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 FAM236BA0A1B0GV22 79 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 A6NIN4 97 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 FAM25AB3EWG3 89 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 FAM25CB3EWG5 89 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 FAM25GB3EWG6 89 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 PIPP12273 146 aaPredicted RBP0.67□□□□□ -2.3
LINC00557-201ENST00000563184 MRPS10P82664 201 aaKnown RBP0.67□□□□□ -2.3
LINC00557-201ENST00000563184 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 OCIAD2Q56VL3 154 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 SPANXN1Q5VSR9 72 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 LYPD5Q6UWN5 251 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 DEFB132Q7Z7B7 95 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 SNX29P2Q8IUI4 249 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 C4orf33Q8N1A6 199 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 VSTM2AQ8TAG5 236 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 DPH3Q96FX2 82 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 SDF2Q99470 211 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 CGREF1Q99674 301 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 SNRNP25Q9BV90 132 aaKnown RBP0.67□□□□□ -2.3
LINC00557-201ENST00000563184 LSM2Q9Y333 95 aaKnown RBP0.67□□□□□ -2.3
LINC00557-201ENST00000563184 DEPDC5O75140 1603 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 ABCA9Q8IUA7 1624 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 ALKQ9UM73 1620 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 FER1L6Q2WGJ9 1857 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 NCOA2Q15596 1464 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 PLEKHH2Q8IVE3 1493 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 FYCO1Q9BQS8 1478 aa0.67□□□□□ -2.3
LINC00557-201ENST00000563184 UNC13BO14795 1591 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 DIP2AQ14689 1571 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 XIRP1Q702N8 1843 aaKnown RBP0.66□□□□□ -2.3
LINC00557-201ENST00000563184 ANKRD11Q6UB99 2663 aaPredicted RBP0.66□□□□□ -2.3
LINC00557-201ENST00000563184 WIZO95785 1651 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 CLIP1P30622 1438 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 BDP1A6H8Y1 2624 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 SLIT1O75093 1534 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 PRDM15P57071 1507 aaPredicted RBP0.66□□□□□ -2.3
LINC00557-201ENST00000563184 ASXL1Q8IXJ9 1541 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.66□□□□□ -2.3
LINC00557-201ENST00000563184 TRBV10-1A0A0K0K1A3 114 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 TEX49A0A1B0GTD5 131 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 NUPR2A6NF83 97 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 DLEU1O43261 78 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 NDUFB6O95139 128 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 IFNGP01579 166 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 FXYD4P59646 89 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 OR2T2Q6IF00 324 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 C2orf88Q9BSF0 95 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 NAA60Q9H7X0 242 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 PCNTO95613 3336 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 TTC28Q96AY4 2481 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 MROH1Q8NDA8 1641 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 RNF17Q9BXT8 1623 aaKnown RBP0.66□□□□□ -2.3
LINC00557-201ENST00000563184 PZPP20742 1482 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 IQGAP2Q13576 1575 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 CFAP74Q9C0B2 1584 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 DIP2CQ9Y2E4 1556 aa0.66□□□□□ -2.3
LINC00557-201ENST00000563184 CEP170BQ9Y4F5 1589 aaPredicted RBP0.66□□□□□ -2.3
LINC00557-201ENST00000563184 PDE4DIPQ5VU43 2346 aa0.65□□□□□ -2.3
LINC00557-201ENST00000563184 ABCC1P33527 1531 aa0.65□□□□□ -2.31
LINC00557-201ENST00000563184 NEXMIFQ5QGS0 1516 aa0.65□□□□□ -2.31
LINC00557-201ENST00000563184 KIF21BO75037 1637 aa0.65□□□□□ -2.31
LINC00557-201ENST00000563184 LRP6O75581 1613 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms