RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 IGHV3-48P01763 117 aa4.06□□□□□ -1.76
LINC01963-201ENST00000562038 GATA2P23769 480 aaPredicted RBP4.06□□□□□ -1.76
LINC01963-201ENST00000562038 ZFAND2AQ8N6M9 145 aa4.06□□□□□ -1.76
LINC01963-201ENST00000562038 TMEM101Q96IK0 257 aa4.06□□□□□ -1.76
LINC01963-201ENST00000562038 ZNF324O75467 553 aaPredicted RBP4.06□□□□□ -1.76
LINC01963-201ENST00000562038 RPS20P60866 119 aaKnown RBP4.06□□□□□ -1.76
LINC01963-201ENST00000562038 COL5A1-AS1Q5SY13 56 aa4.06□□□□□ -1.76
LINC01963-201ENST00000562038 SBSPONQ8IVN8 264 aa4.06□□□□□ -1.76
LINC01963-201ENST00000562038 CT45A10P0DMU9 189 aa4.06□□□□□ -1.76
LINC01963-201ENST00000562038 FAM231DQ6ZW35 169 aa4.06□□□□□ -1.76
LINC01963-201ENST00000562038 TMEM183AQ8IXX5 376 aa4.06□□□□□ -1.76
LINC01963-201ENST00000562038 OR4B1Q8NGF8 309 aa4.06□□□□□ -1.76
LINC01963-201ENST00000562038 MLST8Q9BVC4 326 aa4.06□□□□□ -1.76
LINC01963-201ENST00000562038 SH3BGRL3Q9H299 93 aa4.06□□□□□ -1.76
LINC01963-201ENST00000562038 PLA2G2EQ9NZK7 142 aa4.06□□□□□ -1.76
LINC01963-201ENST00000562038 VAX2Q9UIW0 290 aa4.06□□□□□ -1.76
LINC01963-201ENST00000562038 TRAV21A0A0B4J279 112 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 PEX7O00628 323 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 CRYGDP07320 174 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 ZNF688P0C7X2 276 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 RAB5AP20339 215 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 HOXA5P20719 270 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 ERVFC1-1P60608 527 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 Q86TA4 180 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 CMTM2Q8TAZ6 248 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 KRTAP9-6A0A140TA67 174 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 FABP5P3A8MUU1 101 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 GGTLC3B5MD39 225 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 BCL2P10415 239 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 TNP2Q05952 138 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 C1orf158Q8N1D5 194 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 SLC25A22Q9H936 323 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 SMCO4Q9NRQ5 59 aa4.05□□□□□ -1.76
LINC01963-201ENST00000562038 IGHV4-4A0A075B6R2 117 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 TRAV5A0A0B4J249 113 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 C9JQL5 133 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 SPINK4O60575 86 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 SFTA3P0C7M3 94 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 NTF3P20783 257 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 RPL13AP40429 203 aaKnown RBP4.04□□□□□ -1.76
LINC01963-201ENST00000562038 TMEM97Q5BJF2 176 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 MRPL52Q86TS9 123 aaKnown RBP4.04□□□□□ -1.76
LINC01963-201ENST00000562038 AGPAT4-IT1Q9H0P7 198 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 SCRT2Q9NQ03 307 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 DNAH11Q96DT5 4516 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 PLAC8L1A1L4L8 177 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 PRYO14603 147 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 PYYP10082 97 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 CCL20P78556 96 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 CD164L2Q6UWJ8 174 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 ZFP2Q6ZN57 461 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 SH2D6Q7Z4S9 175 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 STPG4Q8N801 248 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 C9orf85Q96MD7 179 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 VGLL1Q99990 258 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 MRPL16Q9NX20 251 aaKnown RBP4.04□□□□□ -1.76
LINC01963-201ENST00000562038 GAGE12BA1L429 117 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 ZNF727A8MUV8 499 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 CCDC179H3BU77 68 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 GCGP01275 180 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 LINC00694P0DN24 101 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 ICAM4Q14773 271 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 C15orf53Q8NAA6 179 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 C11orf72Q8NBR9 251 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 NIPSNAP3BQ9BS92 247 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 CNFNQ9BYD5 112 aa4.04□□□□□ -1.76
LINC01963-201ENST00000562038 YTHDF2Q9Y5A9 579 aaKnown RBP4.04□□□□□ -1.76
LINC01963-201ENST00000562038 IGHV3-35A0A0C4DH35 117 aa4.03□□□□□ -1.76
LINC01963-201ENST00000562038 MEF2BQ02080 365 aaPredicted RBP4.03□□□□□ -1.76
LINC01963-201ENST00000562038 POM121L12Q8N7R1 296 aa4.03□□□□□ -1.76
LINC01963-201ENST00000562038 GFRA4Q9GZZ7 299 aa4.03□□□□□ -1.76
LINC01963-201ENST00000562038 COX11Q9Y6N1 276 aa4.03□□□□□ -1.76
LINC01963-201ENST00000562038 IGHV1OR15-1A0A075B7D0 117 aa4.03□□□□□ -1.76
LINC01963-201ENST00000562038 TRAV10A0A0B4J240 114 aa4.03□□□□□ -1.76
LINC01963-201ENST00000562038 C7orf77A4D0Y5 90 aa4.03□□□□□ -1.76
LINC01963-201ENST00000562038 PGPA6NDG6 321 aa4.03□□□□□ -1.76
LINC01963-201ENST00000562038 MT-ND4LP03901 98 aa4.03□□□□□ -1.76
LINC01963-201ENST00000562038 SPART-AS1P0CW21 52 aa4.03□□□□□ -1.76
LINC01963-201ENST00000562038 GATD1Q8NB37 220 aa4.03□□□□□ -1.76
LINC01963-201ENST00000562038 OR13C6PQ8NH95 151 aa4.03□□□□□ -1.76
LINC01963-201ENST00000562038 KNCNA6PVL3 124 aa4.02□□□□□ -1.77
LINC01963-201ENST00000562038 FOXA3P55318 350 aaPredicted RBP4.02□□□□□ -1.77
LINC01963-201ENST00000562038 CD164Q04900 197 aa4.02□□□□□ -1.77
LINC01963-201ENST00000562038 KLK5Q9Y337 293 aaPredicted RBP4.02□□□□□ -1.77
LINC01963-201ENST00000562038 VPS13BQ7Z7G8 4022 aa4.02□□□□□ -1.77
LINC01963-201ENST00000562038 GDF5OSQ5U4N7 250 aa4.02□□□□□ -1.77
LINC01963-201ENST00000562038 FAM213BQ8TBF2 198 aa4.02□□□□□ -1.77
LINC01963-201ENST00000562038 RARRES2Q99969 163 aa4.02□□□□□ -1.77
LINC01963-201ENST00000562038 SDF2L1Q9HCN8 221 aa4.02□□□□□ -1.77
LINC01963-201ENST00000562038 DKK2Q9UBU2 259 aa4.02□□□□□ -1.77
LINC01963-201ENST00000562038 IGHV3-66A0A0C4DH42 116 aa4.01□□□□□ -1.77
LINC01963-201ENST00000562038 C19orf71A6NCJ1 209 aa4.01□□□□□ -1.77
LINC01963-201ENST00000562038 TRGC2P03986 189 aa4.01□□□□□ -1.77
LINC01963-201ENST00000562038 OR5AL1P0C617 328 aa4.01□□□□□ -1.77
LINC01963-201ENST00000562038 CACNG7P62955 275 aa4.01□□□□□ -1.77
LINC01963-201ENST00000562038 RRN3P1Q2M238 152 aa4.01□□□□□ -1.77
LINC01963-201ENST00000562038 C15orf54Q8N8G6 183 aa4.01□□□□□ -1.77
LINC01963-201ENST00000562038 FER1L6-AS1Q8NA97 138 aa4.01□□□□□ -1.77
LINC01963-201ENST00000562038 SPANXB1Q9NS25 103 aaPredicted RBP4.01□□□□□ -1.77
LINC01963-201ENST00000562038 IL36BQ9NZH7 164 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms