RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 ADORA2A-AS1P86434 159 aa4.47□□□□□ -1.69
SNRPA1-209ENST00000560307 EBI3Q14213 229 aa4.47□□□□□ -1.69
SNRPA1-209ENST00000560307 RHOHQ15669 191 aa4.47□□□□□ -1.69
SNRPA1-209ENST00000560307 APRG1Q8IVJ8 170 aa4.47□□□□□ -1.69
SNRPA1-209ENST00000560307 PRSS33Q8NF86 280 aa4.47□□□□□ -1.69
SNRPA1-209ENST00000560307 LINC00477Q96M19 166 aa4.47□□□□□ -1.69
SNRPA1-209ENST00000560307 SPXQ9BT56 116 aa4.47□□□□□ -1.69
SNRPA1-209ENST00000560307 HEATR1Q9H583 2144 aaKnown RBP4.46□□□□□ -1.69
SNRPA1-209ENST00000560307 TRAV26-2A0A0B4J265 109 aa4.46□□□□□ -1.7
SNRPA1-209ENST00000560307 TMEM223A0PJW6 202 aa4.46□□□□□ -1.7
SNRPA1-209ENST00000560307 LINC01548A6NM66 108 aa4.46□□□□□ -1.7
SNRPA1-209ENST00000560307 OVOL1O14753 267 aa4.46□□□□□ -1.7
SNRPA1-209ENST00000560307 UQCRQO14949 82 aa4.46□□□□□ -1.7
SNRPA1-209ENST00000560307 BRI3O95415 125 aa4.46□□□□□ -1.7
SNRPA1-209ENST00000560307 CTSGP08311 255 aa4.46□□□□□ -1.7
SNRPA1-209ENST00000560307 POLR2KP53803 58 aaKnown RBP4.46□□□□□ -1.7
SNRPA1-209ENST00000560307 DLX1P56177 255 aa4.46□□□□□ -1.7
SNRPA1-209ENST00000560307 RPS28P62857 69 aaKnown RBP4.46□□□□□ -1.7
SNRPA1-209ENST00000560307 CCL8P80075 99 aa4.46□□□□□ -1.7
SNRPA1-209ENST00000560307 NSUN5P1Q3KNT7 163 aa4.46□□□□□ -1.7
SNRPA1-209ENST00000560307 C2orf82Q6UX34 121 aa4.46□□□□□ -1.7
SNRPA1-209ENST00000560307 LY6G5BQ8NDX9 201 aa4.46□□□□□ -1.7
SNRPA1-209ENST00000560307 DPM3Q9P2X0 92 aa4.46□□□□□ -1.7
SNRPA1-209ENST00000560307 PRAC2D3DTV9 90 aa4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 J3KT08 172 aa4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 M0R1W7 72 aa4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 LST1O00453 97 aa4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 CDX4O14627 284 aaPredicted RBP4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 TIMM17BO60830 172 aa4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 TSHBP01222 138 aa4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 CRIP2P52943 208 aaPredicted RBP4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 TSPEAR-AS2P59090 65 aa4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 LINC00643Q86TS7 51 aa4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 GPHB5Q86YW7 130 aa4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 C3orf22Q8N5N4 141 aa4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 Q8N6K4 173 aa4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 KLHL30-AS1Q8NEE0 82 aa4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 RNASE6Q93091 150 aaKnown RBP4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 LINC00526Q96FQ7 95 aa4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 PPDPFQ9H3Y8 114 aa4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 TP53TG1Q9Y2A0 90 aa4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 ICOSQ9Y6W8 199 aa4.45□□□□□ -1.7
SNRPA1-209ENST00000560307 REV3LO60673 3130 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 A0A0J9YXY3 114 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 TRBV27A0A0K0K1C4 114 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 ODF3BA8MYP8 253 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 NDUFA7O95182 113 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 S100A4P26447 101 aaKnown RBP4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 Q1RN00 199 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 MINOS1Q5TGZ0 78 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 SFTA2Q6UW10 78 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 SDIM1Q6ZPB5 146 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 Q6ZQT7 251 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 TRPT1Q86TN4 253 aaKnown RBP4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 MUSTN1Q8IVN3 82 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 FDCSPQ8NFU4 85 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 ITLN2Q8WWU7 325 aaPredicted RBP4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 RPL39LQ96EH5 51 aaKnown RBP4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 FAM19A4Q96LR4 140 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 METTL26Q96S19 204 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 PHLDA3Q9Y5J5 127 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 FAM215AQ9Y5M1 114 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 KIF25-AS1Q9Y6Z4 181 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 MINOS1-NBL1R4GNA1 71 aa4.44□□□□□ -1.7
SNRPA1-209ENST00000560307 CNTRLQ7Z7A1 2325 aa4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 TRBV7-1A0A0A6YYK4 115 aa4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 TEX49A0A1B0GTD5 131 aa4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 H7C423 109 aa4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 MGPP08493 103 aa4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 ZNF22P17026 224 aaPredicted RBP4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 RNASE4P34096 147 aaKnown RBP4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 C9orf153Q5TBE3 101 aa4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 TMEM219Q86XT9 240 aa4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 ZFAND2AQ8N6M9 145 aa4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 OR13C6PQ8NH95 151 aa4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 ZNRF2Q8NHG8 242 aa4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 CCL17Q92583 94 aa4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 EEF1AKMT3Q96AZ1 226 aa4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 EDA2RQ9HAV5 297 aa4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 DYNLRB1Q9NP97 96 aa4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 CSDC2Q9Y534 153 aaKnown RBP4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 MKI67P46013 3256 aaKnown RBP4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 MALRD1Q5VYJ5 2156 aa4.43□□□□□ -1.7
SNRPA1-209ENST00000560307 CLPSL1A2RUU4 121 aa4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 SMIM9A6NGZ8 99 aa4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 TGFAP01135 160 aa4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 IGHV4-39P01824 125 aa4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 CRYGAP11844 174 aa4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 COX7CP15954 63 aa4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 COX7A1P24310 79 aa4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 LINC00315P59091 139 aa4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 NDPQ00604 133 aa4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 ZNF56Q15929 161 aa4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 MIAQ16674 131 aa4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 IGFL3Q6UXB1 125 aa4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 RNF182Q8N6D2 247 aa4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 C14orf178Q8N769 122 aaPredicted RBP4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 COPS9Q8WXC6 57 aa4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 MED13Q9UHV7 2174 aa4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 ZNF256Q9Y2P7 627 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms