RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 H3BVH4 76 aa11.68□□□□□ -0.54
CDC42BPB-204ENST00000559043 LGALS9BQ3B8N2 356 aa11.68□□□□□ -0.54
CDC42BPB-204ENST00000559043 ODF3L2Q3SX64 289 aa11.68□□□□□ -0.54
CDC42BPB-204ENST00000559043 COL5A1-AS1Q5SY13 56 aa11.68□□□□□ -0.54
CDC42BPB-204ENST00000559043 SPANXN1Q5VSR9 72 aa11.68□□□□□ -0.54
CDC42BPB-204ENST00000559043 LGALS9CQ6DKI2 356 aa11.68□□□□□ -0.54
CDC42BPB-204ENST00000559043 IGLV2-18A0A075B6J9 118 aa11.67□□□□□ -0.54
CDC42BPB-204ENST00000559043 TRAV2A0A0B4J234 112 aa11.67□□□□□ -0.54
CDC42BPB-204ENST00000559043 MED14OSP0DP75 135 aa11.67□□□□□ -0.54
CDC42BPB-204ENST00000559043 GATA1P15976 413 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPB-204ENST00000559043 ID1P41134 155 aa11.67□□□□□ -0.54
CDC42BPB-204ENST00000559043 BATFQ16520 125 aa11.67□□□□□ -0.54
CDC42BPB-204ENST00000559043 Q8N1Y9 231 aa11.67□□□□□ -0.54
CDC42BPB-204ENST00000559043 WFDC10AQ9H1F0 79 aa11.67□□□□□ -0.54
CDC42BPB-204ENST00000559043 SCRT2Q9NQ03 307 aa11.67□□□□□ -0.54
CDC42BPB-204ENST00000559043 J3KRW8 73 aa11.67□□□□□ -0.54
CDC42BPB-204ENST00000559043 FXYD7P58549 80 aa11.67□□□□□ -0.54
CDC42BPB-204ENST00000559043 NRACQ8N912 160 aa11.67□□□□□ -0.54
CDC42BPB-204ENST00000559043 PMCHL2Q9BQD1 86 aa11.67□□□□□ -0.54
CDC42BPB-204ENST00000559043 Q8N8P6 123 aa11.66□□□□□ -0.54
CDC42BPB-204ENST00000559043 IFI27L1Q96BM0 104 aa11.66□□□□□ -0.54
CDC42BPB-204ENST00000559043 MAP6D1Q9H9H5 199 aa11.66□□□□□ -0.54
CDC42BPB-204ENST00000559043 AGRNO00468 2067 aa11.66□□□□□ -0.54
CDC42BPB-204ENST00000559043 KLLNB2CW77 178 aa11.65□□□□□ -0.54
CDC42BPB-204ENST00000559043 PRB2P02812 416 aaPredicted RBP11.65□□□□□ -0.54
CDC42BPB-204ENST00000559043 FCER1GP30273 86 aa11.65□□□□□ -0.54
CDC42BPB-204ENST00000559043 RNASE4P34096 147 aaKnown RBP11.65□□□□□ -0.54
CDC42BPB-204ENST00000559043 ASIPP42127 132 aa11.65□□□□□ -0.54
CDC42BPB-204ENST00000559043 DEFB131AP59861 70 aa11.65□□□□□ -0.54
CDC42BPB-204ENST00000559043 ANXA2RQ3ZCQ2 193 aa11.65□□□□□ -0.54
CDC42BPB-204ENST00000559043 PSMG4Q5JS54 123 aa11.65□□□□□ -0.54
CDC42BPB-204ENST00000559043 KPRPQ5T749 579 aaPredicted RBP11.65□□□□□ -0.54
CDC42BPB-204ENST00000559043 KIR3DS1Q14943 382 aa11.65□□□□□ -0.55
CDC42BPB-204ENST00000559043 STPG4Q8N801 248 aa11.65□□□□□ -0.55
CDC42BPB-204ENST00000559043 MRAP2Q96G30 205 aa11.65□□□□□ -0.55
CDC42BPB-204ENST00000559043 GOLT1BQ9Y3E0 138 aa11.65□□□□□ -0.55
CDC42BPB-204ENST00000559043 SLC25A34Q6PIV7 304 aa11.64□□□□□ -0.55
CDC42BPB-204ENST00000559043 LEPP41159 167 aa11.63□□□□□ -0.55
CDC42BPB-204ENST00000559043 S100A4P26447 101 aaKnown RBP11.63□□□□□ -0.55
CDC42BPB-204ENST00000559043 TRAV26-2A0A0B4J265 109 aa11.62□□□□□ -0.55
CDC42BPB-204ENST00000559043 RNASE3P12724 160 aaKnown RBP11.62□□□□□ -0.55
CDC42BPB-204ENST00000559043 SNRPD3P62318 126 aaKnown RBP11.62□□□□□ -0.55
CDC42BPB-204ENST00000559043 ODF3Q96PU9 254 aa11.62□□□□□ -0.55
CDC42BPB-204ENST00000559043 TP73-AS1Q9UF72 201 aa11.62□□□□□ -0.55
CDC42BPB-204ENST00000559043 KNCNA6PVL3 124 aa11.61□□□□□ -0.55
CDC42BPB-204ENST00000559043 COX8AP10176 69 aa11.61□□□□□ -0.55
CDC42BPB-204ENST00000559043 HINT1P49773 126 aaPredicted RBP11.61□□□□□ -0.55
CDC42BPB-204ENST00000559043 PHLDA3Q9Y5J5 127 aa11.61□□□□□ -0.55
CDC42BPB-204ENST00000559043 OR11H12B2RN74 326 aa11.61□□□□□ -0.55
CDC42BPB-204ENST00000559043 M0R381 172 aa11.61□□□□□ -0.55
CDC42BPB-204ENST00000559043 GNRH2O43555 120 aa11.61□□□□□ -0.55
CDC42BPB-204ENST00000559043 NXPH4O95158 308 aa11.61□□□□□ -0.55
CDC42BPB-204ENST00000559043 DPH3P1Q9H4G8 78 aa11.61□□□□□ -0.55
CDC42BPB-204ENST00000559043 ZNF25P17030 456 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPB-204ENST00000559043 GTSCR1Q86UQ5 136 aa11.6□□□□□ -0.55
CDC42BPB-204ENST00000559043 FAM110AQ9BQ89 295 aa11.6□□□□□ -0.55
CDC42BPB-204ENST00000559043 A0A0J9YX75 114 aa11.59□□□□□ -0.55
CDC42BPB-204ENST00000559043 LAGE3Q14657 143 aa11.59□□□□□ -0.55
CDC42BPB-204ENST00000559043 TMEM208Q9BTX3 173 aa11.59□□□□□ -0.55
CDC42BPB-204ENST00000559043 SPRY2O43597 315 aa11.58□□□□□ -0.56
CDC42BPB-204ENST00000559043 GAGE1Q13065 139 aa11.58□□□□□ -0.56
CDC42BPB-204ENST00000559043 ANKRD39Q53RE8 183 aa11.58□□□□□ -0.56
CDC42BPB-204ENST00000559043 POM121L12Q8N7R1 296 aa11.58□□□□□ -0.56
CDC42BPB-204ENST00000559043 C18orf15Q96N68 181 aa11.58□□□□□ -0.56
CDC42BPB-204ENST00000559043 ZMAT4Q9H898 229 aa11.58□□□□□ -0.56
CDC42BPB-204ENST00000559043 G0S2P27469 103 aa11.58□□□□□ -0.56
CDC42BPB-204ENST00000559043 FAM159AQ6UWV7 190 aa11.58□□□□□ -0.56
CDC42BPB-204ENST00000559043 C14orf178Q8N769 122 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPB-204ENST00000559043 RASL10AQ92737 203 aa11.58□□□□□ -0.56
CDC42BPB-204ENST00000559043 C20orf78Q9BR46 151 aa11.58□□□□□ -0.56
CDC42BPB-204ENST00000559043 SMIM2Q9BVW6 85 aa11.58□□□□□ -0.56
CDC42BPB-204ENST00000559043 C7orf71A4D174 169 aa11.57□□□□□ -0.56
CDC42BPB-204ENST00000559043 H3BMM0 161 aa11.57□□□□□ -0.56
CDC42BPB-204ENST00000559043 K7EIL1 84 aa11.57□□□□□ -0.56
CDC42BPB-204ENST00000559043 DLEU1O43261 78 aa11.57□□□□□ -0.56
CDC42BPB-204ENST00000559043 SMIM17P0DL12 118 aa11.57□□□□□ -0.56
CDC42BPB-204ENST00000559043 FGF6P10767 208 aa11.57□□□□□ -0.56
CDC42BPB-204ENST00000559043 CMC4P56277 68 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPB-204ENST00000559043 ODF1Q14990 250 aa11.57□□□□□ -0.56
CDC42BPB-204ENST00000559043 AP1S3Q96PC3 154 aa11.57□□□□□ -0.56
CDC42BPB-204ENST00000559043 DKK2Q9UBU2 259 aa11.57□□□□□ -0.56
CDC42BPB-204ENST00000559043 MUC4Q99102 2169 aa11.57□□□□□ -0.56
CDC42BPB-204ENST00000559043 RBMY1BA6NDE4 496 aaKnown RBP11.56□□□□□ -0.56
CDC42BPB-204ENST00000559043 RBMY1EA6NEQ0 496 aaKnown RBP11.56□□□□□ -0.56
CDC42BPB-204ENST00000559043 ATP5LO75964 103 aa11.56□□□□□ -0.56
CDC42BPB-204ENST00000559043 RBMY1DP0C7P1 496 aaKnown RBP11.56□□□□□ -0.56
CDC42BPB-204ENST00000559043 MPV17L2Q567V2 206 aa11.56□□□□□ -0.56
CDC42BPB-204ENST00000559043 FOXI2Q6ZQN5 318 aa11.56□□□□□ -0.56
CDC42BPB-204ENST00000559043 KIF25-AS1Q9Y6Z4 181 aa11.56□□□□□ -0.56
CDC42BPB-204ENST00000559043 IGKV3-20P01619 116 aa11.56□□□□□ -0.56
CDC42BPB-204ENST00000559043 SUMO2P61956 95 aaKnown RBP11.56□□□□□ -0.56
CDC42BPB-204ENST00000559043 C2orf91Q6ZV80 131 aa11.56□□□□□ -0.56
CDC42BPB-204ENST00000559043 TRAV12-3A0A0B4J271 114 aa11.55□□□□□ -0.56
CDC42BPB-204ENST00000559043 K7EMI3 77 aa11.55□□□□□ -0.56
CDC42BPB-204ENST00000559043 IGHV4-30-4P0DP06 118 aa11.55□□□□□ -0.56
CDC42BPB-204ENST00000559043 HLA-DRB4P13762 266 aa11.55□□□□□ -0.56
CDC42BPB-204ENST00000559043 BVES-AS1Q5T3Y7 98 aa11.55□□□□□ -0.56
CDC42BPB-204ENST00000559043 HLA-DRB4X5D2U9 266 aa11.55□□□□□ -0.56
CDC42BPB-204ENST00000559043 NUDT3O95989 172 aa11.54□□□□□ -0.56
CDC42BPB-204ENST00000559043 LINC00315P59091 139 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms