RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 C14orf178Q8N769 122 aaPredicted RBP10.91□□□□□ -0.66
RABGGTA-206ENST00000558649 UPK3BQ9BT76 320 aa10.91□□□□□ -0.66
RABGGTA-206ENST00000558649 SSBP4Q9BWG4 385 aaPredicted RBP10.91□□□□□ -0.66
RABGGTA-206ENST00000558649 RPP21Q9H633 154 aaKnown RBP10.91□□□□□ -0.66
RABGGTA-206ENST00000558649 CRYGDP07320 174 aa10.9□□□□□ -0.66
RABGGTA-206ENST00000558649 IGLC6P0CF74 106 aa10.9□□□□□ -0.66
RABGGTA-206ENST00000558649 SRSF3P84103 164 aaKnown RBP10.9□□□□□ -0.66
RABGGTA-206ENST00000558649 GAGE12JA6NER3 117 aa10.89□□□□□ -0.67
RABGGTA-206ENST00000558649 GAGE1Q13065 139 aa10.89□□□□□ -0.67
RABGGTA-206ENST00000558649 GAGE4Q13068 117 aa10.89□□□□□ -0.67
RABGGTA-206ENST00000558649 GAGE5Q13069 117 aa10.89□□□□□ -0.67
RABGGTA-206ENST00000558649 ZNF56Q15929 161 aa10.89□□□□□ -0.67
RABGGTA-206ENST00000558649 GAGE13Q4V321 117 aa10.89□□□□□ -0.67
RABGGTA-206ENST00000558649 C9JQL5 133 aa10.88□□□□□ -0.67
RABGGTA-206ENST00000558649 SIVA1O15304 175 aa10.88□□□□□ -0.67
RABGGTA-206ENST00000558649 GATCO43716 136 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-206ENST00000558649 NDUFS6O75380 124 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-206ENST00000558649 ERVFC1-1P60608 527 aa10.88□□□□□ -0.67
RABGGTA-206ENST00000558649 PEA15Q15121 130 aa10.88□□□□□ -0.67
RABGGTA-206ENST00000558649 LYZL1Q6UWQ5 148 aa10.88□□□□□ -0.67
RABGGTA-206ENST00000558649 SH2D6Q7Z4S9 175 aa10.88□□□□□ -0.67
RABGGTA-206ENST00000558649 AP1S3Q96PC3 154 aa10.88□□□□□ -0.67
RABGGTA-206ENST00000558649 Q9UF83 564 aa10.88□□□□□ -0.67
RABGGTA-206ENST00000558649 DNAH6Q9C0G6 4158 aa10.87□□□□□ -0.67
RABGGTA-206ENST00000558649 SMIM17P0DL12 118 aa10.87□□□□□ -0.67
RABGGTA-206ENST00000558649 RAB14P61106 215 aa10.87□□□□□ -0.67
RABGGTA-206ENST00000558649 C1orf134Q5TEV5 83 aa10.87□□□□□ -0.67
RABGGTA-206ENST00000558649 LINC01551Q86U37 167 aa10.87□□□□□ -0.67
RABGGTA-206ENST00000558649 LY96Q9Y6Y9 160 aa10.87□□□□□ -0.67
RABGGTA-206ENST00000558649 F5H697 171 aa10.86□□□□□ -0.67
RABGGTA-206ENST00000558649 CACNG7P62955 275 aa10.86□□□□□ -0.67
RABGGTA-206ENST00000558649 TTC32Q5I0X7 151 aa10.86□□□□□ -0.67
RABGGTA-206ENST00000558649 WFDC10BQ8IUB3 73 aa10.86□□□□□ -0.67
RABGGTA-206ENST00000558649 ATP6V0E2Q8NHE4 81 aa10.86□□□□□ -0.67
RABGGTA-206ENST00000558649 KRTAP1-5Q9BYS1 174 aa10.86□□□□□ -0.67
RABGGTA-206ENST00000558649 MSRB1Q9NZV6 116 aa10.86□□□□□ -0.67
RABGGTA-206ENST00000558649 A0A1W2PPQ1 181 aa10.85□□□□□ -0.67
RABGGTA-206ENST00000558649 F2Z2F3 143 aa10.85□□□□□ -0.67
RABGGTA-206ENST00000558649 RTL8CO15255 209 aa10.85□□□□□ -0.67
RABGGTA-206ENST00000558649 MGPP08493 103 aa10.85□□□□□ -0.67
RABGGTA-206ENST00000558649 FAM231DQ6ZW35 169 aa10.85□□□□□ -0.67
RABGGTA-206ENST00000558649 CTRLP40313 264 aa10.84□□□□□ -0.67
RABGGTA-206ENST00000558649 RAB4BP61018 213 aa10.84□□□□□ -0.67
RABGGTA-206ENST00000558649 ADIRFQ15847 76 aa10.84□□□□□ -0.67
RABGGTA-206ENST00000558649 TMEM241Q24JQ0 296 aa10.84□□□□□ -0.67
RABGGTA-206ENST00000558649 OR10J3Q5JRS4 329 aa10.84□□□□□ -0.67
RABGGTA-206ENST00000558649 SOHLH1Q5JUK2 328 aa10.84□□□□□ -0.67
RABGGTA-206ENST00000558649 NTF3P20783 257 aa10.83□□□□□ -0.68
RABGGTA-206ENST00000558649 TWIST1Q15672 202 aa10.83□□□□□ -0.68
RABGGTA-206ENST00000558649 FAM74A3Q4VXF1 159 aa10.83□□□□□ -0.68
RABGGTA-206ENST00000558649 C6orf223Q8N319 242 aa10.83□□□□□ -0.68
RABGGTA-206ENST00000558649 GTSF1Q8WW33 167 aa10.83□□□□□ -0.68
RABGGTA-206ENST00000558649 GTSF1LQ9H1H1 148 aa10.83□□□□□ -0.68
RABGGTA-206ENST00000558649 PRSS29PA6NIE9 313 aa10.82□□□□□ -0.68
RABGGTA-206ENST00000558649 A8MWL6 223 aa10.82□□□□□ -0.68
RABGGTA-206ENST00000558649 TRGC1P0CF51 173 aa10.82□□□□□ -0.68
RABGGTA-206ENST00000558649 LINC00694P0DN24 101 aa10.82□□□□□ -0.68
RABGGTA-206ENST00000558649 PGLYRP4Q96LB8 373 aa10.82□□□□□ -0.68
RABGGTA-206ENST00000558649 SMDT1Q9H4I9 107 aa10.82□□□□□ -0.68
RABGGTA-206ENST00000558649 NAT8Q9UHE5 227 aa10.82□□□□□ -0.68
RABGGTA-206ENST00000558649 KIF25-AS1Q9Y6Z4 181 aa10.82□□□□□ -0.68
RABGGTA-206ENST00000558649 TRAV8-6A0A0B4J262 113 aa10.81□□□□□ -0.68
RABGGTA-206ENST00000558649 EVI2AP22794 236 aa10.81□□□□□ -0.68
RABGGTA-206ENST00000558649 TIRAPP58753 221 aa10.81□□□□□ -0.68
RABGGTA-206ENST00000558649 RPL23P62829 140 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-206ENST00000558649 RPL36AP83881 106 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-206ENST00000558649 LINC00336Q6ZUF6 198 aa10.81□□□□□ -0.68
RABGGTA-206ENST00000558649 C15orf54Q8N8G6 183 aa10.81□□□□□ -0.68
RABGGTA-206ENST00000558649 RPL36ALQ969Q0 106 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-206ENST00000558649 ISOC2Q96AB3 205 aa10.81□□□□□ -0.68
RABGGTA-206ENST00000558649 TRBV10-1A0A0K0K1A3 114 aa10.8□□□□□ -0.68
RABGGTA-206ENST00000558649 IFITM2Q01629 132 aa10.8□□□□□ -0.68
RABGGTA-206ENST00000558649 CT83Q5H943 113 aa10.8□□□□□ -0.68
RABGGTA-206ENST00000558649 LELP1Q5T871 98 aa10.8□□□□□ -0.68
RABGGTA-206ENST00000558649 NEXN-AS1Q8NBZ9 246 aa10.8□□□□□ -0.68
RABGGTA-206ENST00000558649 OSTCQ9NRP0 149 aa10.8□□□□□ -0.68
RABGGTA-206ENST00000558649 TRBV7-3A0A075B6L6 115 aa10.79□□□□□ -0.68
RABGGTA-206ENST00000558649 IGHV3-38A0A0C4DH36 116 aa10.79□□□□□ -0.68
RABGGTA-206ENST00000558649 LINC00315P59091 139 aa10.79□□□□□ -0.68
RABGGTA-206ENST00000558649 CLLU1Q5K131 121 aa10.79□□□□□ -0.68
RABGGTA-206ENST00000558649 DPH3P1Q9H4G8 78 aa10.79□□□□□ -0.68
RABGGTA-206ENST00000558649 TRAV9-2A0A087WT02 112 aa10.78□□□□□ -0.68
RABGGTA-206ENST00000558649 IGHV3-30P01768 117 aa10.78□□□□□ -0.68
RABGGTA-206ENST00000558649 IGHV3-33P01772 117 aa10.78□□□□□ -0.68
RABGGTA-206ENST00000558649 DNAH10OSP0CZ25 163 aa10.78□□□□□ -0.68
RABGGTA-206ENST00000558649 IGHV3-30-3P0DP02 117 aa10.78□□□□□ -0.68
RABGGTA-206ENST00000558649 IGHV3-30-5P0DP03 117 aa10.78□□□□□ -0.68
RABGGTA-206ENST00000558649 UBE2D3P61077 147 aa10.78□□□□□ -0.68
RABGGTA-206ENST00000558649 UBE2D2P62837 147 aa10.78□□□□□ -0.68
RABGGTA-206ENST00000558649 SUMO4Q6EEV6 95 aa10.78□□□□□ -0.68
RABGGTA-206ENST00000558649 WDR73Q6P4I2 378 aa10.78□□□□□ -0.68
RABGGTA-206ENST00000558649 TSKUQ8WUA8 353 aa10.78□□□□□ -0.68
RABGGTA-206ENST00000558649 BORCS7Q96B45 105 aa10.78□□□□□ -0.68
RABGGTA-206ENST00000558649 CNFNQ9BYD5 112 aa10.78□□□□□ -0.68
RABGGTA-206ENST00000558649 V9GYV3 84 aa10.78□□□□□ -0.68
RABGGTA-206ENST00000558649 HIGD1CA8MV81 97 aa10.77□□□□□ -0.69
RABGGTA-206ENST00000558649 OR10G8Q8NGN5 311 aa10.77□□□□□ -0.69
RABGGTA-206ENST00000558649 FRAS1Q86XX4 4008 aa10.76□□□□□ -0.69
RABGGTA-206ENST00000558649 EPPK1P58107 5090 aaKnown RBP10.76□□□□□ -0.69
RABGGTA-206ENST00000558649 A0A087WWC5 75 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms