RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 TMEM141Q96I45 108 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 CEP19Q96LK0 163 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 AP1S3Q96PC3 154 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 BPESC1Q9GZL8 116 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 C19orf12Q9NSK7 152 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 NDUFAF1Q9Y375 327 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 MED31Q9Y3C7 131 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 DNAJC15Q9Y5T4 150 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 FAT3Q8TDW7 4589 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 ARHGAP31Q2M1Z3 1444 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 KIAA1109Q2LD37 5005 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 TACC2O95359 2948 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 KDM3BQ7LBC6 1761 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 PRRC2CQ9Y520 2896 aaKnown RBP-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 KDM5CP41229 1560 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 PKHD1L1Q86WI1 4243 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 MUC17Q685J3 4493 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 ZFHX3Q15911 3703 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 PCNX1Q96RV3 2341 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 TRBV7-1A0A0A6YYK4 115 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 TRBV7-6A0A0J9YX20 115 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 LOC107986453A0A1B0GWG9 222 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 MAP1LC3B2A6NCE7 125 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 IFITM5A6NNB3 132 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 ZNF670-ZNF695F2Z2N8 137 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 M0R3E3 92 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 MT-ND4LP03901 98 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 G0S2P27469 103 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 CKS2P33552 79 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 RPL22P35268 128 aaKnown RBP-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 SPRR1AP35321 89 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 POLR2HP52434 150 aaKnown RBP-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 POLR2JP52435 117 aaKnown RBP-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 CCSMST1Q4G0I0 132 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 DCUN1D2Q6PH85 259 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 UNQ5815/PRO19632Q6UWF5 114 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 SLC25A26Q70HW3 274 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 STX12Q86Y82 276 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 C20orf197Q8N268 126 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 OR4S1Q8NGB4 309 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 THEM6Q8WUY1 208 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 AP3S1Q92572 193 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 MCEEQ96PE7 176 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 SMIM7Q9BQ49 75 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 BET1LQ9NYM9 111 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 LAMTOR3Q9UHA4 124 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 PRO0255Q9UI72 69 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 EPPK1P58107 5090 aaKnown RBP-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 USP9YO00507 2555 aaPredicted RBP-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 SYNMO15061 1565 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 SYNJ1O43426 1573 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 RYR1P21817 5038 aa-0.33□□□□□ -2.46
FOXN3-216ENST00000557496 ITPR3Q14573 2671 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 REV3LO60673 3130 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 TRAV12-2A0A075B6T6 113 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 TEX49A0A1B0GTD5 131 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 TMEM14DPA8MWL7 114 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 M0R129 80 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 UQCRQO14949 82 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 BCE1O60756 84 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 PITX3O75364 302 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 COX4I1P13073 169 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 ACYP2P14621 99 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 GNG10P50151 68 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 AKR1D1P51857 326 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 PCBD1P61457 104 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 PRDM2Q13029 1718 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 INSL4Q14641 139 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 TMED2Q15363 201 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 HSD17B12Q53GQ0 312 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 Q5VSD8 79 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 TMEM91Q6ZNR0 172 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 UBE2DNLQ8IWF7 75 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 C4orf33Q8N1A6 199 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 COX7B2Q8TF08 81 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 C10orf82Q8WW14 230 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 CCDC115Q96NT0 180 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 GID8Q9NWU2 228 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 COA4Q9NYJ1 87 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 METTL1Q9UBP6 276 aaKnown RBP-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 LSM2Q9Y333 95 aaKnown RBP-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 EIF3AQ14152 1382 aaKnown RBP-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 MED23Q9ULK4 1368 aa-0.34□□□□□ -2.46
FOXN3-216ENST00000557496 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.35□□□□□ -2.46
FOXN3-216ENST00000557496 A2MP01023 1474 aa-0.35□□□□□ -2.46
FOXN3-216ENST00000557496 BCL9LQ86UU0 1499 aa-0.35□□□□□ -2.46
FOXN3-216ENST00000557496 HYDINQ4G0P3 5121 aa-0.35□□□□□ -2.46
FOXN3-216ENST00000557496 HTTP42858 3142 aa-0.35□□□□□ -2.46
FOXN3-216ENST00000557496 SPG11Q96JI7 2443 aa-0.35□□□□□ -2.46
FOXN3-216ENST00000557496 TNRC18O15417 2968 aaPredicted RBP-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 ZZEF1O43149 2961 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 PATJQ8NI35 1801 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 HECTD1Q9ULT8 2610 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 TRAV1-2A0A0B4J238 106 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 TRAV12-3A0A0B4J271 114 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 TCRBV3S1A0A5B6 114 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 RBAKDNA6NC62 111 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 MCRIP1C9JLW8 97 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms