RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 TPT1P13693 172 aaKnown RBP9.44□□□□□ -0.9
SNX6-210ENST00000557341 AKR1C3P42330 323 aa9.44□□□□□ -0.9
SNX6-210ENST00000557341 ZNF674Q2M3X9 581 aa9.44□□□□□ -0.9
SNX6-210ENST00000557341 LINC01559Q495D7 138 aa9.44□□□□□ -0.9
SNX6-210ENST00000557341 TOR2AQ5JU69 321 aa9.44□□□□□ -0.9
SNX6-210ENST00000557341 CST9LP1Q5W188 147 aa9.44□□□□□ -0.9
SNX6-210ENST00000557341 VPS13BQ7Z7G8 4022 aa9.44□□□□□ -0.9
SNX6-210ENST00000557341 DMBT1Q9UGM3 2413 aaPredicted RBP9.43□□□□□ -0.9
SNX6-210ENST00000557341 M0R381 172 aa9.43□□□□□ -0.9
SNX6-210ENST00000557341 INAFM2P0DMQ5 153 aa9.43□□□□□ -0.9
SNX6-210ENST00000557341 ZNF345Q14585 488 aa9.43□□□□□ -0.9
SNX6-210ENST00000557341 ZFP82Q8N141 532 aa9.43□□□□□ -0.9
SNX6-210ENST00000557341 Q9UF83 564 aa9.43□□□□□ -0.9
SNX6-210ENST00000557341 URGCP-MRPS24S4R325 110 aa9.43□□□□□ -0.9
SNX6-210ENST00000557341 A0A087WWL8 130 aa9.42□□□□□ -0.9
SNX6-210ENST00000557341 TMSB15BA0A087X1C1 80 aa9.42□□□□□ -0.9
SNX6-210ENST00000557341 HAMPP81172 84 aa9.42□□□□□ -0.9
SNX6-210ENST00000557341 DAZ4Q86SG3 579 aaKnown RBP9.42□□□□□ -0.9
SNX6-210ENST00000557341 SFRP2Q96HF1 295 aa9.42□□□□□ -0.9
SNX6-210ENST00000557341 DAZ3Q9NR90 486 aaKnown RBP9.42□□□□□ -0.9
SNX6-210ENST00000557341 HERC1Q15751 4861 aa9.41□□□□□ -0.9
SNX6-210ENST00000557341 SMLR1H3BR10 107 aa9.41□□□□□ -0.9
SNX6-210ENST00000557341 PAGE4O60829 102 aa9.41□□□□□ -0.9
SNX6-210ENST00000557341 SMR3BP02814 79 aaPredicted RBP9.41□□□□□ -0.9
SNX6-210ENST00000557341 KCNRGQ8N5I3 272 aa9.41□□□□□ -0.9
SNX6-210ENST00000557341 MYCBP2O75592 4640 aa9.4□□□□□ -0.9
SNX6-210ENST00000557341 TRBV10-1A0A0K0K1A3 114 aa9.4□□□□□ -0.9
SNX6-210ENST00000557341 UMAD1C9J7I0 102 aa9.4□□□□□ -0.9
SNX6-210ENST00000557341 FAM229AH3BQW9 127 aa9.4□□□□□ -0.9
SNX6-210ENST00000557341 PFDN1O60925 122 aa9.4□□□□□ -0.9
SNX6-210ENST00000557341 SEC11BP0C7V7 166 aa9.4□□□□□ -0.9
SNX6-210ENST00000557341 WFDC2Q14508 124 aa9.4□□□□□ -0.9
SNX6-210ENST00000557341 FAM213BQ8TBF2 198 aa9.4□□□□□ -0.9
SNX6-210ENST00000557341 COX11Q9Y6N1 276 aa9.4□□□□□ -0.9
SNX6-210ENST00000557341 C1QBP02746 253 aa9.39□□□□□ -0.91
SNX6-210ENST00000557341 S100A9P06702 114 aaKnown RBP9.39□□□□□ -0.91
SNX6-210ENST00000557341 RPL36AP83881 106 aaKnown RBP9.39□□□□□ -0.91
SNX6-210ENST00000557341 NIT1Q86X76 327 aa9.39□□□□□ -0.91
SNX6-210ENST00000557341 SFT2D1Q8WV19 159 aa9.39□□□□□ -0.91
SNX6-210ENST00000557341 RPL36ALQ969Q0 106 aaKnown RBP9.39□□□□□ -0.91
SNX6-210ENST00000557341 RMI2Q96E14 147 aa9.39□□□□□ -0.91
SNX6-210ENST00000557341 A0A1B0GV50 99 aa9.38□□□□□ -0.91
SNX6-210ENST00000557341 SCO2A0A1W2PP80 73 aa9.38□□□□□ -0.91
SNX6-210ENST00000557341 KANTRA0A1W2PQU2 76 aa9.38□□□□□ -0.91
SNX6-210ENST00000557341 LECT2O14960 151 aa9.38□□□□□ -0.91
SNX6-210ENST00000557341 CXCL1P09341 107 aa9.38□□□□□ -0.91
SNX6-210ENST00000557341 MBD3L1Q8WWY6 194 aa9.38□□□□□ -0.91
SNX6-210ENST00000557341 CHCHD7Q9BUK0 85 aa9.38□□□□□ -0.91
SNX6-210ENST00000557341 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.37□□□□□ -0.91
SNX6-210ENST00000557341 TRBV7-3A0A075B6L6 115 aa9.37□□□□□ -0.91
SNX6-210ENST00000557341 A0A087WX48 190 aa9.37□□□□□ -0.91
SNX6-210ENST00000557341 BCL2L11O43521 198 aa9.37□□□□□ -0.91
SNX6-210ENST00000557341 UBE2D3P61077 147 aa9.37□□□□□ -0.91
SNX6-210ENST00000557341 UBE2D2P62837 147 aa9.37□□□□□ -0.91
SNX6-210ENST00000557341 ZNF56Q15929 161 aa9.37□□□□□ -0.91
SNX6-210ENST00000557341 KCNIP4Q6PIL6 250 aa9.37□□□□□ -0.91
SNX6-210ENST00000557341 ZNF471Q9BX82 626 aaPredicted RBP9.37□□□□□ -0.91
SNX6-210ENST00000557341 KLK12Q9UKR0 248 aa9.37□□□□□ -0.91
SNX6-210ENST00000557341 DNAH8Q96JB1 4490 aa9.37□□□□□ -0.91
SNX6-210ENST00000557341 FLG2Q5D862 2391 aaPredicted RBP9.36□□□□□ -0.91
SNX6-210ENST00000557341 IGKV2D-24A0A075B6R9 120 aa9.36□□□□□ -0.91
SNX6-210ENST00000557341 A0A0D9SG52 128 aa9.36□□□□□ -0.91
SNX6-210ENST00000557341 HMSDA8MTL9 139 aa9.36□□□□□ -0.91
SNX6-210ENST00000557341 RPL19P84098 196 aaKnown RBP9.36□□□□□ -0.91
SNX6-210ENST00000557341 ELOBQ15370 118 aa9.36□□□□□ -0.91
SNX6-210ENST00000557341 OR10AG1Q8NH19 301 aa9.36□□□□□ -0.91
SNX6-210ENST00000557341 FAM30AQ9NZY2 134 aa9.36□□□□□ -0.91
SNX6-210ENST00000557341 RAB4BP61018 213 aa9.35□□□□□ -0.91
SNX6-210ENST00000557341 EIF5AP63241 154 aaKnown RBP9.35□□□□□ -0.91
SNX6-210ENST00000557341 PRR27Q6MZM9 219 aa9.35□□□□□ -0.91
SNX6-210ENST00000557341 Q6ZSA8 131 aa9.35□□□□□ -0.91
SNX6-210ENST00000557341 BAGE2Q86Y30 109 aa9.35□□□□□ -0.91
SNX6-210ENST00000557341 OR10G8Q8NGN5 311 aa9.35□□□□□ -0.91
SNX6-210ENST00000557341 BAALCQ8WXS3 180 aa9.35□□□□□ -0.91
SNX6-210ENST00000557341 MLST8Q9BVC4 326 aa9.35□□□□□ -0.91
SNX6-210ENST00000557341 SNAI2O43623 268 aa9.34□□□□□ -0.91
SNX6-210ENST00000557341 H2AFB1P0C5Y9 115 aa9.34□□□□□ -0.91
SNX6-210ENST00000557341 SPANXN1Q5VSR9 72 aa9.34□□□□□ -0.91
SNX6-210ENST00000557341 UBE2WQ96B02 151 aa9.34□□□□□ -0.91
SNX6-210ENST00000557341 DNAJC30Q96LL9 226 aa9.34□□□□□ -0.91
SNX6-210ENST00000557341 OR5AL1P0C617 328 aa9.33□□□□□ -0.92
SNX6-210ENST00000557341 ATRAIDQ6UW56 229 aa9.33□□□□□ -0.92
SNX6-210ENST00000557341 Q8N976 141 aa9.33□□□□□ -0.92
SNX6-210ENST00000557341 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.33□□□□□ -0.92
SNX6-210ENST00000557341 NEXN-AS1Q8NBZ9 246 aa9.33□□□□□ -0.92
SNX6-210ENST00000557341 MANBALQ9NQG1 85 aa9.33□□□□□ -0.92
SNX6-210ENST00000557341 TRBV6-8A0A0A6YYG3 113 aa9.32□□□□□ -0.92
SNX6-210ENST00000557341 CRPP02741 224 aa9.32□□□□□ -0.92
SNX6-210ENST00000557341 Q0VG73 95 aa9.32□□□□□ -0.92
SNX6-210ENST00000557341 TMUB2Q71RG4 321 aa9.32□□□□□ -0.92
SNX6-210ENST00000557341 AP1S3Q96PC3 154 aa9.32□□□□□ -0.92
SNX6-210ENST00000557341 SSBP4Q9BWG4 385 aaPredicted RBP9.32□□□□□ -0.92
SNX6-210ENST00000557341 RBFOX3A6NFN3 312 aa9.31□□□□□ -0.92
SNX6-210ENST00000557341 TMEM262E9PQX1 116 aa9.31□□□□□ -0.92
SNX6-210ENST00000557341 RPL35P42766 123 aaKnown RBP9.31□□□□□ -0.92
SNX6-210ENST00000557341 C11orf52Q96A22 123 aa9.31□□□□□ -0.92
SNX6-210ENST00000557341 C1orf43Q9BWL3 253 aa9.31□□□□□ -0.92
SNX6-210ENST00000557341 GNG13Q9P2W3 67 aa9.31□□□□□ -0.92
SNX6-210ENST00000557341 MUC21A0A0G2JKD1 596 aa9.3□□□□□ -0.92
SNX6-210ENST00000557341 MUC21A0A140T8X8 626 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms