RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 LINC01006Q8NI28 216 aa13.19□□□□□ -0.3
PTPN21-208ENST00000556564 CRYGBP07316 175 aa13.19□□□□□ -0.3
PTPN21-208ENST00000556564 MRPL35Q9NZE8 188 aaKnown RBP13.19□□□□□ -0.3
PTPN21-208ENST00000556564 MDFICQ9P1T7 246 aa13.19□□□□□ -0.3
PTPN21-208ENST00000556564 NDUFA12Q9UI09 145 aa13.19□□□□□ -0.3
PTPN21-208ENST00000556564 KLF12Q9Y4X4 402 aa13.18□□□□□ -0.3
PTPN21-208ENST00000556564 LGALS9O00182 355 aa13.18□□□□□ -0.3
PTPN21-208ENST00000556564 DAZ2Q13117 558 aaKnown RBP13.18□□□□□ -0.3
PTPN21-208ENST00000556564 DAZ4Q86SG3 579 aaKnown RBP13.18□□□□□ -0.3
PTPN21-208ENST00000556564 NDUFAF3Q9BU61 184 aa13.18□□□□□ -0.3
PTPN21-208ENST00000556564 DAZ3Q9NR90 486 aaKnown RBP13.18□□□□□ -0.3
PTPN21-208ENST00000556564 SHANK1Q9Y566 2161 aa13.18□□□□□ -0.3
PTPN21-208ENST00000556564 C10orf126Q8N4M7 172 aa13.18□□□□□ -0.3
PTPN21-208ENST00000556564 UBE2BP63146 152 aa13.18□□□□□ -0.3
PTPN21-208ENST00000556564 Q6ZS46 218 aa13.18□□□□□ -0.3
PTPN21-208ENST00000556564 SH2D6Q7Z4S9 175 aa13.18□□□□□ -0.3
PTPN21-208ENST00000556564 TMEM263Q8WUH6 116 aaKnown RBP13.18□□□□□ -0.3
PTPN21-208ENST00000556564 PLA2G2EQ9NZK7 142 aa13.18□□□□□ -0.3
PTPN21-208ENST00000556564 HILS1P60008 231 aa13.17□□□□□ -0.3
PTPN21-208ENST00000556564 EBI3Q14213 229 aa13.17□□□□□ -0.3
PTPN21-208ENST00000556564 ZNF503Q96F45 646 aa13.17□□□□□ -0.3
PTPN21-208ENST00000556564 TRAV8-3A0A0A6YYJ7 113 aa13.17□□□□□ -0.3
PTPN21-208ENST00000556564 AVPP01185 164 aa13.16□□□□□ -0.3
PTPN21-208ENST00000556564 P0C879 139 aa13.16□□□□□ -0.3
PTPN21-208ENST00000556564 UTRNP46939 3433 aa13.16□□□□□ -0.3
PTPN21-208ENST00000556564 PSMG3-AS1Q96PY0 264 aa13.16□□□□□ -0.3
PTPN21-208ENST00000556564 TP53TG3Q9ULZ0 132 aa13.15□□□□□ -0.3
PTPN21-208ENST00000556564 EIF4EBP1Q13541 118 aaPredicted RBP13.15□□□□□ -0.3
PTPN21-208ENST00000556564 EML5Q05BV3 1969 aa13.14□□□□□ -0.31
PTPN21-208ENST00000556564 MPV17L2Q567V2 206 aa13.14□□□□□ -0.31
PTPN21-208ENST00000556564 C10orf91Q5T1B1 145 aa13.14□□□□□ -0.31
PTPN21-208ENST00000556564 MBD6Q96DN6 1003 aa13.14□□□□□ -0.31
PTPN21-208ENST00000556564 TRBV7-3A0A075B6L6 115 aa13.14□□□□□ -0.31
PTPN21-208ENST00000556564 LYPD6BQ8NI32 183 aa13.14□□□□□ -0.31
PTPN21-208ENST00000556564 DKK2Q9UBU2 259 aa13.13□□□□□ -0.31
PTPN21-208ENST00000556564 C20orf173Q96LM9 149 aa13.13□□□□□ -0.31
PTPN21-208ENST00000556564 TRAV8-4A0A0B4J246 113 aa13.13□□□□□ -0.31
PTPN21-208ENST00000556564 ANKHD1Q8IWZ3 2542 aaKnown RBP13.12□□□□□ -0.31
PTPN21-208ENST00000556564 PSMB8P28062 276 aa13.12□□□□□ -0.31
PTPN21-208ENST00000556564 ADAMTS20P59510 1910 aa13.12□□□□□ -0.31
PTPN21-208ENST00000556564 A0A1W2PPR1 153 aa13.12□□□□□ -0.31
PTPN21-208ENST00000556564 CAMK2N2Q96S95 79 aa13.12□□□□□ -0.31
PTPN21-208ENST00000556564 F8VRH5 84 aa13.12□□□□□ -0.31
PTPN21-208ENST00000556564 C20orf144Q9BQM9 153 aa13.12□□□□□ -0.31
PTPN21-208ENST00000556564 IL17DQ8TAD2 202 aa13.12□□□□□ -0.31
PTPN21-208ENST00000556564 SNHG12Q9BXW3 62 aa13.12□□□□□ -0.31
PTPN21-208ENST00000556564 TMEM126AQ9H061 195 aa13.12□□□□□ -0.31
PTPN21-208ENST00000556564 GAGE2EQ4V326 116 aa13.11□□□□□ -0.31
PTPN21-208ENST00000556564 VSIG2Q96IQ7 327 aa13.11□□□□□ -0.31
PTPN21-208ENST00000556564 SCRT2Q9NQ03 307 aa13.11□□□□□ -0.31
PTPN21-208ENST00000556564 GAGE2DQ9UEU5 116 aa13.11□□□□□ -0.31
PTPN21-208ENST00000556564 PRR14LQ5THK1 2151 aa13.11□□□□□ -0.31
PTPN21-208ENST00000556564 PRB2P02812 416 aaPredicted RBP13.11□□□□□ -0.31
PTPN21-208ENST00000556564 KIR3DS1Q14943 382 aa13.11□□□□□ -0.31
PTPN21-208ENST00000556564 GTSF1Q8WW33 167 aa13.11□□□□□ -0.31
PTPN21-208ENST00000556564 NCOR2Q9Y618 2525 aa13.11□□□□□ -0.31
PTPN21-208ENST00000556564 PYY3Q5JQD4 70 aa13.11□□□□□ -0.31
PTPN21-208ENST00000556564 SPANXA1Q9NS26 97 aa13.11□□□□□ -0.31
PTPN21-208ENST00000556564 ZFP2Q6ZN57 461 aa13.1□□□□□ -0.31
PTPN21-208ENST00000556564 LGALS9BQ3B8N2 356 aa13.1□□□□□ -0.31
PTPN21-208ENST00000556564 LGALS9CQ6DKI2 356 aa13.1□□□□□ -0.31
PTPN21-208ENST00000556564 Q6ZWC4 215 aa13.1□□□□□ -0.31
PTPN21-208ENST00000556564 ACACBO00763 2458 aa13.1□□□□□ -0.31
PTPN21-208ENST00000556564 COX7A2LO14548 114 aa13.1□□□□□ -0.31
PTPN21-208ENST00000556564 OVOL2Q9BRP0 275 aa13.1□□□□□ -0.31
PTPN21-208ENST00000556564 C11orf1Q9H5F2 150 aa13.1□□□□□ -0.31
PTPN21-208ENST00000556564 PTPN13Q12923 2485 aa13.1□□□□□ -0.31
PTPN21-208ENST00000556564 PLCE1Q9P212 2302 aa13.1□□□□□ -0.31
PTPN21-208ENST00000556564 TRAV26-1A0A087WT03 109 aa13.1□□□□□ -0.31
PTPN21-208ENST00000556564 TRAV4A0A0B4J268 109 aa13.1□□□□□ -0.31
PTPN21-208ENST00000556564 C2orf82Q6UX34 121 aa13.1□□□□□ -0.31
PTPN21-208ENST00000556564 SPATA25Q9BR10 227 aa13.1□□□□□ -0.31
PTPN21-208ENST00000556564 FAM222AQ5U5X8 452 aa13.09□□□□□ -0.31
PTPN21-208ENST00000556564 J3QQQ9 107 aa13.09□□□□□ -0.31
PTPN21-208ENST00000556564 K7EQG2 157 aa13.09□□□□□ -0.31
PTPN21-208ENST00000556564 KLK12Q9UKR0 248 aa13.09□□□□□ -0.31
PTPN21-208ENST00000556564 ZNF295-AS1Q8N0V1 137 aa13.09□□□□□ -0.31
PTPN21-208ENST00000556564 Q6ZTI0 123 aa13.09□□□□□ -0.31
PTPN21-208ENST00000556564 RAI1Q7Z5J4 1906 aaPredicted RBP13.09□□□□□ -0.31
PTPN21-208ENST00000556564 SLC25A29Q8N8R3 303 aa13.08□□□□□ -0.31
PTPN21-208ENST00000556564 NDUFS6O75380 124 aaKnown RBP13.08□□□□□ -0.32
PTPN21-208ENST00000556564 POLR3KQ9Y2Y1 108 aaPredicted RBP13.08□□□□□ -0.32
PTPN21-208ENST00000556564 IGF2RP11717 2491 aa13.08□□□□□ -0.32
PTPN21-208ENST00000556564 Q9H8V8 135 aa13.08□□□□□ -0.32
PTPN21-208ENST00000556564 Q8N6K4 173 aa13.08□□□□□ -0.32
PTPN21-208ENST00000556564 PRO0255Q9UI72 69 aa13.08□□□□□ -0.32
PTPN21-208ENST00000556564 COL4A2P08572 1712 aa13.08□□□□□ -0.32
PTPN21-208ENST00000556564 NOTCH3Q9UM47 2321 aa13.08□□□□□ -0.32
PTPN21-208ENST00000556564 RPL39P62891 51 aaKnown RBP13.07□□□□□ -0.32
PTPN21-208ENST00000556564 SPG11Q96JI7 2443 aa13.07□□□□□ -0.32
PTPN21-208ENST00000556564 ZNF664Q8N3J9 261 aa13.06□□□□□ -0.32
PTPN21-208ENST00000556564 WFDC10AQ9H1F0 79 aa13.06□□□□□ -0.32
PTPN21-208ENST00000556564 ZFAND3Q9H8U3 227 aa13.06□□□□□ -0.32
PTPN21-208ENST00000556564 CPAMD8Q8IZJ3 1885 aa13.06□□□□□ -0.32
PTPN21-208ENST00000556564 P0DMU3 169 aa13.06□□□□□ -0.32
PTPN21-208ENST00000556564 FAM231AP0DMU4 169 aa13.06□□□□□ -0.32
PTPN21-208ENST00000556564 FAM231CP0DMU5 169 aa13.06□□□□□ -0.32
PTPN21-208ENST00000556564 FGF6P10767 208 aa13.06□□□□□ -0.32
PTPN21-208ENST00000556564 GDF5OSQ5U4N7 250 aa13.06□□□□□ -0.32
PTPN21-208ENST00000556564 ZNF80P51504 273 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms