RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PATE2Q6UY27 113 aa8.26□□□□□ -1.09
ACTN1-216ENST00000556083 SPATA12Q7Z6I5 190 aa8.26□□□□□ -1.09
ACTN1-216ENST00000556083 RSPO3Q9BXY4 272 aaPredicted RBP8.26□□□□□ -1.09
ACTN1-216ENST00000556083 FGF23Q9GZV9 251 aaPredicted RBP8.26□□□□□ -1.09
ACTN1-216ENST00000556083 GTF3C1Q12789 2109 aa8.26□□□□□ -1.09
ACTN1-216ENST00000556083 TMEM256-PLSCR3K7ERE1 68 aa8.26□□□□□ -1.09
ACTN1-216ENST00000556083 DIRC1Q969H9 104 aa8.26□□□□□ -1.09
ACTN1-216ENST00000556083 IGHV4OR15-8A0A075B7B6 117 aa8.26□□□□□ -1.09
ACTN1-216ENST00000556083 A0A087WW49 117 aa8.26□□□□□ -1.09
ACTN1-216ENST00000556083 IGLL5B9A064 214 aa8.26□□□□□ -1.09
ACTN1-216ENST00000556083 NPSP0C0P6 89 aa8.26□□□□□ -1.09
ACTN1-216ENST00000556083 MUC7Q8TAX7 377 aa8.26□□□□□ -1.09
ACTN1-216ENST00000556083 NTN5Q8WTR8 489 aaPredicted RBP8.26□□□□□ -1.09
ACTN1-216ENST00000556083 HEATR5AQ86XA9 2040 aa8.26□□□□□ -1.09
ACTN1-216ENST00000556083 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.25□□□□□ -1.09
ACTN1-216ENST00000556083 IGKV2-29A2NJV5 120 aaPredicted RBP8.25□□□□□ -1.09
ACTN1-216ENST00000556083 ODF3BA8MYP8 253 aa8.25□□□□□ -1.09
ACTN1-216ENST00000556083 WT1P19544 449 aaPredicted RBP8.25□□□□□ -1.09
ACTN1-216ENST00000556083 UFSP1Q6NVU6 142 aa8.25□□□□□ -1.09
ACTN1-216ENST00000556083 C17orf77Q96MU5 243 aa8.25□□□□□ -1.09
ACTN1-216ENST00000556083 PCNX2A6NKB5 2137 aa8.25□□□□□ -1.09
ACTN1-216ENST00000556083 A0A0J9YY99 117 aa8.25□□□□□ -1.09
ACTN1-216ENST00000556083 BLCAPP62952 87 aa8.25□□□□□ -1.09
ACTN1-216ENST00000556083 NREPQ16612 68 aa8.25□□□□□ -1.09
ACTN1-216ENST00000556083 ANAPC1Q9H1A4 1944 aa8.25□□□□□ -1.09
ACTN1-216ENST00000556083 C20orf203Q8NBC4 194 aa8.25□□□□□ -1.09
ACTN1-216ENST00000556083 EBI3Q14213 229 aa8.24□□□□□ -1.09
ACTN1-216ENST00000556083 MDFICQ9P1T7 246 aa8.24□□□□□ -1.09
ACTN1-216ENST00000556083 RPL18AQ02543 176 aaKnown RBP8.24□□□□□ -1.09
ACTN1-216ENST00000556083 C5orf38Q86SI9 138 aa8.24□□□□□ -1.09
ACTN1-216ENST00000556083 Q8N7P7 452 aa8.24□□□□□ -1.09
ACTN1-216ENST00000556083 A0A1B0GX51 115 aa8.24□□□□□ -1.09
ACTN1-216ENST00000556083 SPAG11BQ08648 103 aa8.24□□□□□ -1.09
ACTN1-216ENST00000556083 TEN1Q86WV5 123 aa8.24□□□□□ -1.09
ACTN1-216ENST00000556083 C15orf53Q8NAA6 179 aa8.24□□□□□ -1.09
ACTN1-216ENST00000556083 NBASA2RRP1 2371 aa8.24□□□□□ -1.09
ACTN1-216ENST00000556083 A0A0J9YXY3 114 aa8.24□□□□□ -1.09
ACTN1-216ENST00000556083 UBE2AP49459 152 aa8.24□□□□□ -1.09
ACTN1-216ENST00000556083 SHISA2Q6UWI4 295 aa8.23□□□□□ -1.09
ACTN1-216ENST00000556083 PRORYQ9H606 182 aa8.23□□□□□ -1.09
ACTN1-216ENST00000556083 A0A0J9YXV3 536 aa8.23□□□□□ -1.09
ACTN1-216ENST00000556083 DEFB104AQ8WTQ1 72 aa8.23□□□□□ -1.09
ACTN1-216ENST00000556083 B9D2Q9BPU9 175 aa8.23□□□□□ -1.09
ACTN1-216ENST00000556083 H3BMG7 143 aa8.23□□□□□ -1.09
ACTN1-216ENST00000556083 SEM1Q6ZVN7 128 aa8.23□□□□□ -1.09
ACTN1-216ENST00000556083 GRNP28799 593 aaKnown RBP8.22□□□□□ -1.09
ACTN1-216ENST00000556083 Q6ZQT7 251 aa8.22□□□□□ -1.09
ACTN1-216ENST00000556083 F8W735 103 aaPredicted RBP8.22□□□□□ -1.09
ACTN1-216ENST00000556083 OXLD1Q5BKU9 147 aa8.22□□□□□ -1.09
ACTN1-216ENST00000556083 BDP1A6H8Y1 2624 aa8.22□□□□□ -1.09
ACTN1-216ENST00000556083 DOCK9Q9BZ29 2069 aa8.22□□□□□ -1.09
ACTN1-216ENST00000556083 C19orf71A6NCJ1 209 aa8.22□□□□□ -1.09
ACTN1-216ENST00000556083 HIGD2BQ4VC39 106 aa8.22□□□□□ -1.09
ACTN1-216ENST00000556083 APRG1Q8IVJ8 170 aa8.22□□□□□ -1.09
ACTN1-216ENST00000556083 ODF3L1Q8IXM7 274 aa8.22□□□□□ -1.09
ACTN1-216ENST00000556083 Q9HAA7 133 aa8.22□□□□□ -1.09
ACTN1-216ENST00000556083 NOTCH3Q9UM47 2321 aa8.21□□□□□ -1.09
ACTN1-216ENST00000556083 P0C879 139 aa8.21□□□□□ -1.09
ACTN1-216ENST00000556083 TRBV10-2A0A0K0K1G8 114 aa8.21□□□□□ -1.1
ACTN1-216ENST00000556083 TINCRA0A1B0GVN0 87 aa8.21□□□□□ -1.1
ACTN1-216ENST00000556083 FANCD2OSQ96PS1 177 aa8.21□□□□□ -1.1
ACTN1-216ENST00000556083 MIFP14174 115 aa8.21□□□□□ -1.1
ACTN1-216ENST00000556083 LMO4P61968 165 aa8.21□□□□□ -1.1
ACTN1-216ENST00000556083 Q6YL49 198 aa8.21□□□□□ -1.1
ACTN1-216ENST00000556083 MUC6Q6W4X9 2439 aa8.2□□□□□ -1.1
ACTN1-216ENST00000556083 SPRY2O43597 315 aa8.2□□□□□ -1.1
ACTN1-216ENST00000556083 NDUFS5O43920 106 aa8.2□□□□□ -1.1
ACTN1-216ENST00000556083 ATP5EP2Q5VTU8 51 aa8.2□□□□□ -1.1
ACTN1-216ENST00000556083 MYLKQ15746 1914 aa8.2□□□□□ -1.1
ACTN1-216ENST00000556083 EML6Q6ZMW3 1958 aa8.2□□□□□ -1.1
ACTN1-216ENST00000556083 LINC01548A6NM66 108 aa8.2□□□□□ -1.1
ACTN1-216ENST00000556083 PRB4P10163 310 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-216ENST00000556083 A0A096LPF7 62 aa8.2□□□□□ -1.1
ACTN1-216ENST00000556083 PLA2G5P39877 138 aa8.2□□□□□ -1.1
ACTN1-216ENST00000556083 HILS1P60008 231 aa8.2□□□□□ -1.1
ACTN1-216ENST00000556083 RBM3P98179 157 aaKnown RBP8.2□□□□□ -1.1
ACTN1-216ENST00000556083 DEFB136Q30KP8 78 aa8.2□□□□□ -1.1
ACTN1-216ENST00000556083 PIK3CD-AS1Q5SR53 167 aa8.2□□□□□ -1.1
ACTN1-216ENST00000556083 MUSTN1Q8IVN3 82 aa8.2□□□□□ -1.1
ACTN1-216ENST00000556083 BAALCQ8WXS3 180 aa8.2□□□□□ -1.1
ACTN1-216ENST00000556083 SPATA25Q9BR10 227 aa8.2□□□□□ -1.1
ACTN1-216ENST00000556083 RPL39LQ96EH5 51 aaKnown RBP8.2□□□□□ -1.1
ACTN1-216ENST00000556083 MAP6D1Q9H9H5 199 aa8.19□□□□□ -1.1
ACTN1-216ENST00000556083 NFE4Q86UQ8 179 aa8.19□□□□□ -1.1
ACTN1-216ENST00000556083 TMEM61Q8N0U2 210 aa8.19□□□□□ -1.1
ACTN1-216ENST00000556083 CHKB-CPT1BH3BT56 60 aa8.19□□□□□ -1.1
ACTN1-216ENST00000556083 ATRXP46100 2492 aa8.19□□□□□ -1.1
ACTN1-216ENST00000556083 NACAE9PAV3 2078 aa8.18□□□□□ -1.1
ACTN1-216ENST00000556083 K7EQG2 157 aa8.18□□□□□ -1.1
ACTN1-216ENST00000556083 ZFP36P26651 326 aaKnown RBP8.18□□□□□ -1.1
ACTN1-216ENST00000556083 PRR31Q5SQ13 230 aa8.18□□□□□ -1.1
ACTN1-216ENST00000556083 CLPSL2Q6UWE3 100 aa8.18□□□□□ -1.1
ACTN1-216ENST00000556083 COX7BP24311 80 aa8.18□□□□□ -1.1
ACTN1-216ENST00000556083 PSMB8P28062 276 aa8.18□□□□□ -1.1
ACTN1-216ENST00000556083 MRGPRG-AS1Q2M3A8 158 aa8.18□□□□□ -1.1
ACTN1-216ENST00000556083 DNAJC9-AS1A6NH13 148 aa8.18□□□□□ -1.1
ACTN1-216ENST00000556083 ZGRF1Q86YA3 2104 aa8.18□□□□□ -1.1
ACTN1-216ENST00000556083 C11orf45Q8TAV5 145 aa8.17□□□□□ -1.1
ACTN1-216ENST00000556083 C11orf1Q9H5F2 150 aa8.17□□□□□ -1.1
ACTN1-216ENST00000556083 HELZP42694 1942 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms