RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 TMSB15BA0A087X1C1 80 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 IGHV3-16A0A0C4DH30 117 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 PLAC8L1A1L4L8 177 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 GRIFINA4D1Z8 144 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 TMEM189A5PLL7 270 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 GATCO43716 136 aaKnown RBP4.49□□□□□ -1.69
SCFD1-212ENST00000554486 ATP6V1G1O75348 118 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 P01737 135 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 APOC3P02656 99 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 TYMSP04818 313 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 CXCL1P09341 107 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 GZMBP10144 247 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 RNF212Q495C1 297 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 DNLZQ5SXM8 178 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 IBA57Q5T440 356 aaKnown RBP4.49□□□□□ -1.69
SCFD1-212ENST00000554486 FAM159AQ6UWV7 190 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 Q8NAQ8 132 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 C11orf72Q8NBR9 251 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 OR2D3Q8NGH3 330 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 OR10G8Q8NGN5 311 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 RNASE8Q8TDE3 154 aaKnown RBP4.49□□□□□ -1.69
SCFD1-212ENST00000554486 RPP21Q9H633 154 aaKnown RBP4.49□□□□□ -1.69
SCFD1-212ENST00000554486 MDFICQ9P1T7 246 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 STAB2Q8WWQ8 2551 aa4.49□□□□□ -1.69
SCFD1-212ENST00000554486 C7orf77A4D0Y5 90 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 SMIM9A6NGZ8 99 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 MT-ND4LP03901 98 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 RNASE3P12724 160 aaKnown RBP4.48□□□□□ -1.69
SCFD1-212ENST00000554486 HTN1P15515 57 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 RPS20P60866 119 aaKnown RBP4.48□□□□□ -1.69
SCFD1-212ENST00000554486 GAGE2BQ13066 116 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 RRN3P1Q2M238 152 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 GAGE2EQ4V326 116 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 GAGE2AQ6NT46 116 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 ATRAIDQ6UW56 229 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 SVBPQ8N300 66 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 C15orf54Q8N8G6 183 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 KCNS1Q96KK3 526 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 C9orf85Q96MD7 179 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 GSN-AS1Q9NRJ2 163 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 GAGE2DQ9UEU5 116 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 NACAE9PAV3 2078 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 TGP01266 2768 aa4.48□□□□□ -1.69
SCFD1-212ENST00000554486 SMIM27A0A1W2PRY6 76 aa4.47□□□□□ -1.69
SCFD1-212ENST00000554486 A8MWL6 223 aa4.47□□□□□ -1.69
SCFD1-212ENST00000554486 H3BVH4 76 aa4.47□□□□□ -1.69
SCFD1-212ENST00000554486 PPP1R2P9O14990 202 aa4.47□□□□□ -1.69
SCFD1-212ENST00000554486 DEFB4AO15263 64 aa4.47□□□□□ -1.69
SCFD1-212ENST00000554486 SNAI2O43623 268 aa4.47□□□□□ -1.69
SCFD1-212ENST00000554486 IGLC6P0CF74 106 aa4.47□□□□□ -1.69
SCFD1-212ENST00000554486 MIFP14174 115 aa4.47□□□□□ -1.69
SCFD1-212ENST00000554486 ASIPP42127 132 aa4.47□□□□□ -1.69
SCFD1-212ENST00000554486 TCL1AP56279 114 aa4.47□□□□□ -1.69
SCFD1-212ENST00000554486 RHEBQ15382 184 aa4.47□□□□□ -1.69
SCFD1-212ENST00000554486 ZNF493Q6ZR52 646 aa4.47□□□□□ -1.69
SCFD1-212ENST00000554486 TSKUQ8WUA8 353 aa4.47□□□□□ -1.69
SCFD1-212ENST00000554486 TMEM263Q8WUH6 116 aaKnown RBP4.47□□□□□ -1.69
SCFD1-212ENST00000554486 GTSF1Q8WW33 167 aa4.47□□□□□ -1.69
SCFD1-212ENST00000554486 C16orf74Q96GX8 76 aa4.47□□□□□ -1.69
SCFD1-212ENST00000554486 SCRT2Q9NQ03 307 aa4.47□□□□□ -1.69
SCFD1-212ENST00000554486 A0A087WWC5 75 aa4.46□□□□□ -1.7
SCFD1-212ENST00000554486 MUC21A0A0G2JKD1 596 aa4.46□□□□□ -1.7
SCFD1-212ENST00000554486 MUC21A0A140T8X8 626 aa4.46□□□□□ -1.7
SCFD1-212ENST00000554486 XKRY2A2RUG3 117 aa4.46□□□□□ -1.7
SCFD1-212ENST00000554486 IFITM10A6NMD0 228 aa4.46□□□□□ -1.7
SCFD1-212ENST00000554486 SNAPINO95295 136 aa4.46□□□□□ -1.7
SCFD1-212ENST00000554486 ARMS2P0C7Q2 107 aa4.46□□□□□ -1.7
SCFD1-212ENST00000554486 S100A4P26447 101 aaKnown RBP4.46□□□□□ -1.7
SCFD1-212ENST00000554486 CTRLP40313 264 aa4.46□□□□□ -1.7
SCFD1-212ENST00000554486 FOXA3P55318 350 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-212ENST00000554486 RPL36AP83881 106 aaKnown RBP4.46□□□□□ -1.7
SCFD1-212ENST00000554486 ZNF415Q09FC8 603 aa4.46□□□□□ -1.7
SCFD1-212ENST00000554486 DAZ2Q13117 558 aaKnown RBP4.46□□□□□ -1.7
SCFD1-212ENST00000554486 LYZL1Q6UWQ5 148 aa4.46□□□□□ -1.7
SCFD1-212ENST00000554486 FER1L6-AS1Q8NA97 138 aa4.46□□□□□ -1.7
SCFD1-212ENST00000554486 GFRA4Q9GZZ7 299 aa4.46□□□□□ -1.7
SCFD1-212ENST00000554486 NOP10Q9NPE3 64 aaKnown RBP4.46□□□□□ -1.7
SCFD1-212ENST00000554486 RPS10P5Q9NQ39 176 aa4.46□□□□□ -1.7
SCFD1-212ENST00000554486 IL36BQ9NZH7 164 aa4.46□□□□□ -1.7
SCFD1-212ENST00000554486 TIMM8BQ9Y5J9 83 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-212ENST00000554486 A0A0J9YWU9 116 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 A0A1W2PPQ1 181 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 FAM231BA6NCW3 169 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 HIGD1CA8MV81 97 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 SPINK4O60575 86 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 NXPH4O95158 308 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 OR5AL1P0C617 328 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 S100A1P23297 94 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 EMP1P54849 157 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 NUP35Q8NFH5 326 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 OR10AG1Q8NH19 301 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 PTH2Q96A98 100 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 PGLYRP4Q96LB8 373 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 SPXQ9BT56 116 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 TPPP3Q9BW30 176 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 CNFNQ9BYD5 112 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 C11orf68Q9H3H3 251 aaKnown RBP4.45□□□□□ -1.7
SCFD1-212ENST00000554486 TMEM242Q9NWH2 141 aa4.45□□□□□ -1.7
SCFD1-212ENST00000554486 CELA1Q9UNI1 258 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms