RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 PNRC1Q12796 327 aaPredicted RBP5.36□□□□□ -1.55
ABCD4-220ENST00000553998 ZNF876PQ49A33 203 aa5.36□□□□□ -1.55
ABCD4-220ENST00000553998 COMMD7Q86VX2 200 aa5.36□□□□□ -1.55
ABCD4-220ENST00000553998 ZFP82Q8N141 532 aa5.36□□□□□ -1.55
ABCD4-220ENST00000553998 SYT8Q8NBV8 401 aa5.36□□□□□ -1.55
ABCD4-220ENST00000553998 ISOC2Q96AB3 205 aa5.36□□□□□ -1.55
ABCD4-220ENST00000553998 SSBP4Q9BWG4 385 aaPredicted RBP5.36□□□□□ -1.55
ABCD4-220ENST00000553998 RPP21Q9H633 154 aaKnown RBP5.36□□□□□ -1.55
ABCD4-220ENST00000553998 OSTCQ9NRP0 149 aa5.36□□□□□ -1.55
ABCD4-220ENST00000553998 MRPL16Q9NX20 251 aaKnown RBP5.36□□□□□ -1.55
ABCD4-220ENST00000553998 TRAV4A0A0B4J268 109 aa5.35□□□□□ -1.55
ABCD4-220ENST00000553998 TMEM218A2RU14 115 aa5.35□□□□□ -1.55
ABCD4-220ENST00000553998 FAM231BA6NCW3 169 aa5.35□□□□□ -1.55
ABCD4-220ENST00000553998 F2Z2F3 143 aa5.35□□□□□ -1.55
ABCD4-220ENST00000553998 H3BVH4 76 aa5.35□□□□□ -1.55
ABCD4-220ENST00000553998 GATCO43716 136 aaKnown RBP5.35□□□□□ -1.55
ABCD4-220ENST00000553998 NXPH4O95158 308 aa5.35□□□□□ -1.55
ABCD4-220ENST00000553998 IGLC6P0CF74 106 aa5.35□□□□□ -1.55
ABCD4-220ENST00000553998 HTN3P15516 51 aa5.35□□□□□ -1.55
ABCD4-220ENST00000553998 XGP55808 180 aa5.35□□□□□ -1.55
ABCD4-220ENST00000553998 SLAQ13239 276 aa5.35□□□□□ -1.55
ABCD4-220ENST00000553998 ADIRFQ15847 76 aa5.35□□□□□ -1.55
ABCD4-220ENST00000553998 C15orf54Q8N8G6 183 aa5.35□□□□□ -1.55
ABCD4-220ENST00000553998 FER1L6-AS1Q8NA97 138 aa5.35□□□□□ -1.55
ABCD4-220ENST00000553998 RNASE7Q9H1E1 156 aaKnown RBP5.35□□□□□ -1.55
ABCD4-220ENST00000553998 LINC00588Q9Y4M8 146 aa5.35□□□□□ -1.55
ABCD4-220ENST00000553998 PHLDA3Q9Y5J5 127 aa5.35□□□□□ -1.55
ABCD4-220ENST00000553998 DNAH8Q96JB1 4490 aa5.34□□□□□ -1.55
ABCD4-220ENST00000553998 A8MWL6 223 aa5.34□□□□□ -1.55
ABCD4-220ENST00000553998 A8MWV9 139 aa5.34□□□□□ -1.55
ABCD4-220ENST00000553998 F5H768 121 aa5.34□□□□□ -1.55
ABCD4-220ENST00000553998 RS1O15537 224 aa5.34□□□□□ -1.55
ABCD4-220ENST00000553998 FOXA3P55318 350 aaPredicted RBP5.34□□□□□ -1.55
ABCD4-220ENST00000553998 CCL18P55774 89 aa5.34□□□□□ -1.55
ABCD4-220ENST00000553998 CACNG7P62955 275 aa5.34□□□□□ -1.55
ABCD4-220ENST00000553998 WDR73Q6P4I2 378 aa5.34□□□□□ -1.55
ABCD4-220ENST00000553998 SFRP2Q96HF1 295 aa5.34□□□□□ -1.55
ABCD4-220ENST00000553998 GFRA4Q9GZZ7 299 aa5.34□□□□□ -1.55
ABCD4-220ENST00000553998 Q9H8V8 135 aa5.34□□□□□ -1.55
ABCD4-220ENST00000553998 H3BNG1 76 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 RHODO00212 210 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 PPP1R2P9O14990 202 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 CTRLP40313 264 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 SPANXN1Q5VSR9 72 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 CFAP126Q5VTH2 177 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 DMRTA1Q5VZB9 504 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 ZFP2Q6ZN57 461 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 OR4C5Q8NGB2 326 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 OR10G8Q8NGN5 311 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 OR10AG1Q8NH19 301 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 TSKUQ8WUA8 353 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 SEC11CQ9BY50 192 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 CNFNQ9BYD5 112 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 KRTAP1-5Q9BYS1 174 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 PGPEP1Q9NXJ5 209 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 PRO0255Q9UI72 69 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 V9GYV3 84 aa5.33□□□□□ -1.56
ABCD4-220ENST00000553998 F8W036 122 aa5.32□□□□□ -1.56
ABCD4-220ENST00000553998 M0R381 172 aa5.32□□□□□ -1.56
ABCD4-220ENST00000553998 GZMBP10144 247 aa5.32□□□□□ -1.56
ABCD4-220ENST00000553998 ADCYAP1P18509 176 aa5.32□□□□□ -1.56
ABCD4-220ENST00000553998 HOXA5P20719 270 aa5.32□□□□□ -1.56
ABCD4-220ENST00000553998 FHL2Q14192 279 aa5.32□□□□□ -1.56
ABCD4-220ENST00000553998 TTC32Q5I0X7 151 aa5.32□□□□□ -1.56
ABCD4-220ENST00000553998 Q5VSD8 79 aa5.32□□□□□ -1.56
ABCD4-220ENST00000553998 ZNF479Q96JC4 524 aa5.32□□□□□ -1.56
ABCD4-220ENST00000553998 UPK3BQ9BT76 320 aa5.32□□□□□ -1.56
ABCD4-220ENST00000553998 TPPP3Q9BW30 176 aa5.32□□□□□ -1.56
ABCD4-220ENST00000553998 TRGV4A0A0C4DH28 118 aa5.31□□□□□ -1.56
ABCD4-220ENST00000553998 IGHV3-53P01767 116 aa5.31□□□□□ -1.56
ABCD4-220ENST00000553998 MT-ND4LP03901 98 aa5.31□□□□□ -1.56
ABCD4-220ENST00000553998 GATA1P15976 413 aaPredicted RBP5.31□□□□□ -1.56
ABCD4-220ENST00000553998 NDUFA5Q16718 116 aa5.31□□□□□ -1.56
ABCD4-220ENST00000553998 C10orf91Q5T1B1 145 aa5.31□□□□□ -1.56
ABCD4-220ENST00000553998 UFSP1Q6NVU6 142 aa5.31□□□□□ -1.56
ABCD4-220ENST00000553998 LYZL1Q6UWQ5 148 aa5.31□□□□□ -1.56
ABCD4-220ENST00000553998 GTSF1Q8WW33 167 aa5.31□□□□□ -1.56
ABCD4-220ENST00000553998 FRZBQ92765 325 aa5.31□□□□□ -1.56
ABCD4-220ENST00000553998 BORCS7Q96B45 105 aa5.31□□□□□ -1.56
ABCD4-220ENST00000553998 ANAPC16Q96DE5 110 aa5.31□□□□□ -1.56
ABCD4-220ENST00000553998 AP1S3Q96PC3 154 aa5.31□□□□□ -1.56
ABCD4-220ENST00000553998 HHLA3Q9XRX5 114 aa5.31□□□□□ -1.56
ABCD4-220ENST00000553998 CARHSP1Q9Y2V2 147 aaKnown RBP5.31□□□□□ -1.56
ABCD4-220ENST00000553998 TRAV26-1A0A087WT03 109 aa5.3□□□□□ -1.56
ABCD4-220ENST00000553998 TRBV6-4A0A1B0GX49 114 aa5.3□□□□□ -1.56
ABCD4-220ENST00000553998 SMIM27A0A1W2PRY6 76 aa5.3□□□□□ -1.56
ABCD4-220ENST00000553998 HIGD1CA8MV81 97 aa5.3□□□□□ -1.56
ABCD4-220ENST00000553998 PAX4O43316 350 aa5.3□□□□□ -1.56
ABCD4-220ENST00000553998 NUDT3O95989 172 aa5.3□□□□□ -1.56
ABCD4-220ENST00000553998 CRYGDP07320 174 aa5.3□□□□□ -1.56
ABCD4-220ENST00000553998 TRGC1P0CF51 173 aa5.3□□□□□ -1.56
ABCD4-220ENST00000553998 CRYBA4P53673 196 aa5.3□□□□□ -1.56
ABCD4-220ENST00000553998 CDPF1Q6NVV7 123 aa5.3□□□□□ -1.56
ABCD4-220ENST00000553998 Q6ZRN7 208 aaPredicted RBP5.3□□□□□ -1.56
ABCD4-220ENST00000553998 NAT8BQ9UHF3 227 aa5.3□□□□□ -1.56
ABCD4-220ENST00000553998 FLG2Q5D862 2391 aaPredicted RBP5.3□□□□□ -1.56
ABCD4-220ENST00000553998 MUC21A0A0G2JKD1 596 aa5.29□□□□□ -1.56
ABCD4-220ENST00000553998 MUC21A0A140T8X8 626 aa5.29□□□□□ -1.56
ABCD4-220ENST00000553998 A0A1B0GUT8 65 aa5.29□□□□□ -1.56
ABCD4-220ENST00000553998 SMIM17P0DL12 118 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms