RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 PPP1R17O96001 155 aa8.54□□□□□ -1.04
NRDE2-202ENST00000553409 ZNF876PQ49A33 203 aa8.54□□□□□ -1.04
NRDE2-202ENST00000553409 PIP4P1Q86T03 277 aa8.54□□□□□ -1.04
NRDE2-202ENST00000553409 LINC01560Q8TB33 94 aa8.54□□□□□ -1.04
NRDE2-202ENST00000553409 NBASA2RRP1 2371 aa8.54□□□□□ -1.04
NRDE2-202ENST00000553409 IGHV4-39P01824 125 aa8.54□□□□□ -1.04
NRDE2-202ENST00000553409 POLR2KP53803 58 aaKnown RBP8.54□□□□□ -1.04
NRDE2-202ENST00000553409 MUSTN1Q8IVN3 82 aa8.54□□□□□ -1.04
NRDE2-202ENST00000553409 LINC00477Q96M19 166 aa8.54□□□□□ -1.04
NRDE2-202ENST00000553409 ODF3Q96PU9 254 aa8.54□□□□□ -1.04
NRDE2-202ENST00000553409 SPTBN1Q01082 2364 aaKnown RBP8.54□□□□□ -1.04
NRDE2-202ENST00000553409 TRBV7-9A0A0J9YWB2 115 aa8.54□□□□□ -1.04
NRDE2-202ENST00000553409 TCF15Q12870 199 aa8.54□□□□□ -1.04
NRDE2-202ENST00000553409 LINC01620Q4KN68 170 aa8.54□□□□□ -1.04
NRDE2-202ENST00000553409 BEX4Q9NWD9 120 aaPredicted RBP8.54□□□□□ -1.04
NRDE2-202ENST00000553409 KIF25-AS1Q9Y6Z4 181 aa8.54□□□□□ -1.04
NRDE2-202ENST00000553409 OTOGLQ3ZCN5 2332 aa8.54□□□□□ -1.04
NRDE2-202ENST00000553409 IGHV3-64A0A075B6Q5 118 aa8.53□□□□□ -1.04
NRDE2-202ENST00000553409 Q1RN00 199 aa8.53□□□□□ -1.04
NRDE2-202ENST00000553409 SHISA2Q6UWI4 295 aa8.53□□□□□ -1.04
NRDE2-202ENST00000553409 C9orf139Q6ZV77 190 aa8.53□□□□□ -1.04
NRDE2-202ENST00000553409 TMEM141Q96I45 108 aa8.53□□□□□ -1.04
NRDE2-202ENST00000553409 OPRPNQ99935 248 aaPredicted RBP8.53□□□□□ -1.04
NRDE2-202ENST00000553409 F6UB75 175 aa8.53□□□□□ -1.04
NRDE2-202ENST00000553409 OR10J6PQ8NGY7 276 aa8.53□□□□□ -1.04
NRDE2-202ENST00000553409 TIMM17AQ99595 171 aa8.53□□□□□ -1.04
NRDE2-202ENST00000553409 IGHV4OR15-8A0A075B7B6 117 aa8.52□□□□□ -1.04
NRDE2-202ENST00000553409 A0A087WW49 117 aa8.52□□□□□ -1.04
NRDE2-202ENST00000553409 P0DMU3 169 aa8.52□□□□□ -1.04
NRDE2-202ENST00000553409 FAM231AP0DMU4 169 aa8.52□□□□□ -1.04
NRDE2-202ENST00000553409 FAM231CP0DMU5 169 aa8.52□□□□□ -1.04
NRDE2-202ENST00000553409 SMIM20Q8N5G0 67 aa8.52□□□□□ -1.04
NRDE2-202ENST00000553409 C15orf53Q8NAA6 179 aa8.52□□□□□ -1.04
NRDE2-202ENST00000553409 EEF1AKMT3Q96AZ1 226 aa8.52□□□□□ -1.04
NRDE2-202ENST00000553409 HERV-K104P63124 156 aa8.52□□□□□ -1.05
NRDE2-202ENST00000553409 FAM159AQ6UWV7 190 aa8.52□□□□□ -1.05
NRDE2-202ENST00000553409 A0A087WWL8 130 aa8.52□□□□□ -1.05
NRDE2-202ENST00000553409 A0A0B4J2C4 111 aa8.52□□□□□ -1.05
NRDE2-202ENST00000553409 SUMO4Q6EEV6 95 aa8.52□□□□□ -1.05
NRDE2-202ENST00000553409 POM121L12Q8N7R1 296 aa8.52□□□□□ -1.05
NRDE2-202ENST00000553409 TRAV8-4A0A0B4J246 113 aa8.51□□□□□ -1.05
NRDE2-202ENST00000553409 SDHAF1A6NFY7 115 aa8.51□□□□□ -1.05
NRDE2-202ENST00000553409 VCYO14598 125 aa8.51□□□□□ -1.05
NRDE2-202ENST00000553409 RPL32P62910 135 aaKnown RBP8.51□□□□□ -1.05
NRDE2-202ENST00000553409 ATXN8Q156A1 80 aa8.51□□□□□ -1.05
NRDE2-202ENST00000553409 F5H697 171 aa8.51□□□□□ -1.05
NRDE2-202ENST00000553409 MED14OSP0DP75 135 aa8.51□□□□□ -1.05
NRDE2-202ENST00000553409 OOSP1A8MZH6 123 aa8.51□□□□□ -1.05
NRDE2-202ENST00000553409 Q6Q795 121 aa8.51□□□□□ -1.05
NRDE2-202ENST00000553409 ZNF580Q9UK33 172 aa8.51□□□□□ -1.05
NRDE2-202ENST00000553409 AKAP13Q12802 2813 aa8.5□□□□□ -1.05
NRDE2-202ENST00000553409 TRBV7-1A0A0A6YYK4 115 aa8.5□□□□□ -1.05
NRDE2-202ENST00000553409 KLK9Q2XQG4 91 aa8.5□□□□□ -1.05
NRDE2-202ENST00000553409 KLK9Q9UKQ9 250 aa8.5□□□□□ -1.05
NRDE2-202ENST00000553409 ZFHX3Q15911 3703 aa8.5□□□□□ -1.05
NRDE2-202ENST00000553409 IGKV3-7A0A075B6H7 116 aa8.5□□□□□ -1.05
NRDE2-202ENST00000553409 TMEM223A0PJW6 202 aa8.5□□□□□ -1.05
NRDE2-202ENST00000553409 RPL13AP40429 203 aaKnown RBP8.5□□□□□ -1.05
NRDE2-202ENST00000553409 MINOS1Q5TGZ0 78 aa8.5□□□□□ -1.05
NRDE2-202ENST00000553409 UNQ9165/PRO28630Q6UXU0 137 aa8.5□□□□□ -1.05
NRDE2-202ENST00000553409 ZNF256Q9Y2P7 627 aaPredicted RBP8.5□□□□□ -1.05
NRDE2-202ENST00000553409 MINOS1-NBL1R4GNA1 71 aa8.5□□□□□ -1.05
NRDE2-202ENST00000553409 TRBV10-2A0A0K0K1G8 114 aa8.5□□□□□ -1.05
NRDE2-202ENST00000553409 LEPROTO15243 131 aa8.5□□□□□ -1.05
NRDE2-202ENST00000553409 TRIAP1O43715 76 aa8.5□□□□□ -1.05
NRDE2-202ENST00000553409 OVOL1O14753 267 aa8.49□□□□□ -1.05
NRDE2-202ENST00000553409 GRNP28799 593 aaKnown RBP8.49□□□□□ -1.05
NRDE2-202ENST00000553409 FAM110AQ9BQ89 295 aa8.49□□□□□ -1.05
NRDE2-202ENST00000553409 LINC00527Q9UJ94 153 aa8.49□□□□□ -1.05
NRDE2-202ENST00000553409 NXPH4O95158 308 aa8.49□□□□□ -1.05
NRDE2-202ENST00000553409 ZFP36P26651 326 aaKnown RBP8.49□□□□□ -1.05
NRDE2-202ENST00000553409 PRR30Q53SZ7 412 aaPredicted RBP8.49□□□□□ -1.05
NRDE2-202ENST00000553409 FAM19A4Q96LR4 140 aa8.49□□□□□ -1.05
NRDE2-202ENST00000553409 H3BMM0 161 aa8.48□□□□□ -1.05
NRDE2-202ENST00000553409 SOCS3O14543 225 aa8.48□□□□□ -1.05
NRDE2-202ENST00000553409 Q8NA96 180 aa8.48□□□□□ -1.05
NRDE2-202ENST00000553409 UBE2WQ96B02 151 aa8.48□□□□□ -1.05
NRDE2-202ENST00000553409 SPTA1P02549 2419 aa8.48□□□□□ -1.05
NRDE2-202ENST00000553409 ADARB2-AS1A8MUL3 147 aa8.48□□□□□ -1.05
NRDE2-202ENST00000553409 LGALS9O00182 355 aa8.48□□□□□ -1.05
NRDE2-202ENST00000553409 RPL11P62913 178 aaKnown RBP8.48□□□□□ -1.05
NRDE2-202ENST00000553409 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.48□□□□□ -1.05
NRDE2-202ENST00000553409 TRBV27A0A0K0K1C4 114 aa8.48□□□□□ -1.05
NRDE2-202ENST00000553409 ZNF22P17026 224 aaPredicted RBP8.48□□□□□ -1.05
NRDE2-202ENST00000553409 FAM74A4Q5TZK3 123 aa8.48□□□□□ -1.05
NRDE2-202ENST00000553409 RIF1Q5UIP0 2472 aaKnown RBP8.47□□□□□ -1.05
NRDE2-202ENST00000553409 TRBV12-3P01733 135 aa8.47□□□□□ -1.05
NRDE2-202ENST00000553409 C2orf82Q6UX34 121 aa8.47□□□□□ -1.05
NRDE2-202ENST00000553409 LINC01600Q96MT4 127 aa8.47□□□□□ -1.05
NRDE2-202ENST00000553409 TRBV30A0A0K0K1B3 111 aa8.47□□□□□ -1.05
NRDE2-202ENST00000553409 M0R2P5 195 aa8.47□□□□□ -1.05
NRDE2-202ENST00000553409 A0A0J9YXV3 536 aa8.47□□□□□ -1.05
NRDE2-202ENST00000553409 A0A0J9YXY3 114 aa8.47□□□□□ -1.05
NRDE2-202ENST00000553409 APRG1Q8IVJ8 170 aa8.47□□□□□ -1.05
NRDE2-202ENST00000553409 H7C423 109 aa8.46□□□□□ -1.05
NRDE2-202ENST00000553409 IGF2-ASQ6U949 168 aa8.46□□□□□ -1.05
NRDE2-202ENST00000553409 TLN1Q9Y490 2541 aaKnown RBP8.46□□□□□ -1.06
NRDE2-202ENST00000553409 PRSS2P07478 247 aa8.46□□□□□ -1.06
NRDE2-202ENST00000553409 FOXC1Q12948 553 aa8.46□□□□□ -1.06
NRDE2-202ENST00000553409 MEIG1Q5JSS6 88 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms