RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 GAGE6Q13070 117 aa6.35□□□□□ -1.39
AC055716.2-201ENST00000552545 GTSF1Q8WW33 167 aa6.35□□□□□ -1.39
AC055716.2-201ENST00000552545 TMEM242Q9NWH2 141 aa6.35□□□□□ -1.39
AC055716.2-201ENST00000552545 K7EIL1 84 aa6.35□□□□□ -1.39
AC055716.2-201ENST00000552545 ESDP10768 282 aa6.35□□□□□ -1.39
AC055716.2-201ENST00000552545 NBEAL2Q6ZNJ1 2754 aa6.35□□□□□ -1.39
AC055716.2-201ENST00000552545 FER1L6-AS1Q8NA97 138 aa6.35□□□□□ -1.39
AC055716.2-201ENST00000552545 KIR2DL5BQ8NHK3 375 aa6.35□□□□□ -1.39
AC055716.2-201ENST00000552545 PYGO2Q9BRQ0 406 aa6.35□□□□□ -1.39
AC055716.2-201ENST00000552545 MAP1LC3CQ9BXW4 147 aa6.35□□□□□ -1.39
AC055716.2-201ENST00000552545 NAT8BQ9UHF3 227 aa6.35□□□□□ -1.39
AC055716.2-201ENST00000552545 SMIM27A0A1W2PRY6 76 aa6.34□□□□□ -1.39
AC055716.2-201ENST00000552545 BATFQ16520 125 aa6.34□□□□□ -1.39
AC055716.2-201ENST00000552545 KPRPQ5T749 579 aaPredicted RBP6.34□□□□□ -1.39
AC055716.2-201ENST00000552545 LYZL1Q6UWQ5 148 aa6.34□□□□□ -1.39
AC055716.2-201ENST00000552545 TMEM256Q8N2U0 113 aa6.34□□□□□ -1.39
AC055716.2-201ENST00000552545 CSNK1G2-AS1Q8NCQ2 148 aa6.34□□□□□ -1.39
AC055716.2-201ENST00000552545 NUP35Q8NFH5 326 aa6.34□□□□□ -1.39
AC055716.2-201ENST00000552545 SPANXA1Q9NS26 97 aa6.34□□□□□ -1.39
AC055716.2-201ENST00000552545 MDFICQ9P1T7 246 aa6.34□□□□□ -1.39
AC055716.2-201ENST00000552545 ARMS2P0C7Q2 107 aa6.34□□□□□ -1.4
AC055716.2-201ENST00000552545 SMIM17P0DL12 118 aa6.34□□□□□ -1.4
AC055716.2-201ENST00000552545 MRPL54Q6P161 138 aaKnown RBP6.34□□□□□ -1.4
AC055716.2-201ENST00000552545 RCHY1Q96PM5 261 aa6.34□□□□□ -1.4
AC055716.2-201ENST00000552545 TRGV11A0A075B6L2 103 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 HIST1H2BKO60814 126 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 HIST1H2BJP06899 126 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 HIST1H2BOP23527 126 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 HIST1H2BBP33778 126 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 EMP1P54849 157 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 HIST1H2BDP58876 126 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 HIST1H2BCP62807 126 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 SMAGPQ0VAQ4 97 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 HIST2H2BEQ16778 126 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 TDRG1Q3Y452 100 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 ZNF575Q86XF7 245 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 HIST1H2BHQ93079 126 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 BORCS7Q96B45 105 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 HIST1H2BNQ99877 126 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 HIST1H2BMQ99879 126 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 GFRA4Q9GZZ7 299 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 A8MZ25 164 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 RS1O15537 224 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 ELOBQ15370 118 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 RRN3P1Q2M238 152 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 PDZD11Q5EBL8 140 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 IMMP2LQ96T52 175 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 PHLDA3Q9Y5J5 127 aa6.33□□□□□ -1.4
AC055716.2-201ENST00000552545 MUC4Q99102 2169 aa6.32□□□□□ -1.4
AC055716.2-201ENST00000552545 IGHV3-16A0A0C4DH30 117 aa6.32□□□□□ -1.4
AC055716.2-201ENST00000552545 M0R381 172 aa6.32□□□□□ -1.4
AC055716.2-201ENST00000552545 CXCL1P09341 107 aa6.32□□□□□ -1.4
AC055716.2-201ENST00000552545 RNASE3P12724 160 aaKnown RBP6.32□□□□□ -1.4
AC055716.2-201ENST00000552545 CAMPP49913 170 aa6.32□□□□□ -1.4
AC055716.2-201ENST00000552545 TWIST1Q15672 202 aa6.32□□□□□ -1.4
AC055716.2-201ENST00000552545 MRPL23Q16540 153 aaKnown RBP6.32□□□□□ -1.4
AC055716.2-201ENST00000552545 SPANXN1Q5VSR9 72 aa6.32□□□□□ -1.4
AC055716.2-201ENST00000552545 OR10AG1Q8NH19 301 aa6.32□□□□□ -1.4
AC055716.2-201ENST00000552545 RETNQ9HD89 108 aa6.32□□□□□ -1.4
AC055716.2-201ENST00000552545 FAM231BA6NCW3 169 aa6.31□□□□□ -1.4
AC055716.2-201ENST00000552545 SMIM9A6NGZ8 99 aa6.31□□□□□ -1.4
AC055716.2-201ENST00000552545 IGLC6P0CF74 106 aa6.31□□□□□ -1.4
AC055716.2-201ENST00000552545 RPS10P46783 165 aaKnown RBP6.31□□□□□ -1.4
AC055716.2-201ENST00000552545 BTF3L4Q96K17 158 aa6.31□□□□□ -1.4
AC055716.2-201ENST00000552545 DNHD1Q96M86 4753 aa6.31□□□□□ -1.4
AC055716.2-201ENST00000552545 A0A1B0GUT8 65 aa6.31□□□□□ -1.4
AC055716.2-201ENST00000552545 SNURFLB1AK76 121 aa6.31□□□□□ -1.4
AC055716.2-201ENST00000552545 ZNF561-AS1K7EIQ3 104 aa6.31□□□□□ -1.4
AC055716.2-201ENST00000552545 DEFB4AO15263 64 aa6.31□□□□□ -1.4
AC055716.2-201ENST00000552545 NTF3P20783 257 aa6.31□□□□□ -1.4
AC055716.2-201ENST00000552545 ZNF415Q09FC8 603 aa6.31□□□□□ -1.4
AC055716.2-201ENST00000552545 MRPL16Q9NX20 251 aaKnown RBP6.31□□□□□ -1.4
AC055716.2-201ENST00000552545 F2Z2F3 143 aa6.3□□□□□ -1.4
AC055716.2-201ENST00000552545 Q6ZWC4 215 aa6.3□□□□□ -1.4
AC055716.2-201ENST00000552545 SBSPONQ8IVN8 264 aa6.3□□□□□ -1.4
AC055716.2-201ENST00000552545 RNF183Q96D59 192 aa6.3□□□□□ -1.4
AC055716.2-201ENST00000552545 MSRB1Q9NZV6 116 aa6.3□□□□□ -1.4
AC055716.2-201ENST00000552545 HSPB8Q9UJY1 196 aa6.3□□□□□ -1.4
AC055716.2-201ENST00000552545 GAGE12BA1L429 117 aa6.3□□□□□ -1.4
AC055716.2-201ENST00000552545 FOXA3P55318 350 aaPredicted RBP6.3□□□□□ -1.4
AC055716.2-201ENST00000552545 RIGQ13278 110 aa6.3□□□□□ -1.4
AC055716.2-201ENST00000552545 TMEM263Q8WUH6 116 aaKnown RBP6.3□□□□□ -1.4
AC055716.2-201ENST00000552545 C16orf74Q96GX8 76 aa6.3□□□□□ -1.4
AC055716.2-201ENST00000552545 LINC00467Q9BRT7 94 aa6.3□□□□□ -1.4
AC055716.2-201ENST00000552545 X6R8D5 127 aa6.3□□□□□ -1.4
AC055716.2-201ENST00000552545 OR5AL1P0C617 328 aa6.29□□□□□ -1.4
AC055716.2-201ENST00000552545 CTRLP40313 264 aa6.29□□□□□ -1.4
AC055716.2-201ENST00000552545 YPEL4Q96NS1 127 aa6.29□□□□□ -1.4
AC055716.2-201ENST00000552545 NOP10Q9NPE3 64 aaKnown RBP6.29□□□□□ -1.4
AC055716.2-201ENST00000552545 ERG28Q9UKR5 140 aa6.29□□□□□ -1.4
AC055716.2-201ENST00000552545 HBBP68871 147 aa6.29□□□□□ -1.4
AC055716.2-201ENST00000552545 ZNF876PQ49A33 203 aa6.29□□□□□ -1.4
AC055716.2-201ENST00000552545 STPG4Q8N801 248 aa6.29□□□□□ -1.4
AC055716.2-201ENST00000552545 C11orf72Q8NBR9 251 aa6.29□□□□□ -1.4
AC055716.2-201ENST00000552545 C9orf85Q96MD7 179 aa6.29□□□□□ -1.4
AC055716.2-201ENST00000552545 OVOL2Q9BRP0 275 aa6.29□□□□□ -1.4
AC055716.2-201ENST00000552545 GTSF1LQ9H1H1 148 aa6.29□□□□□ -1.4
AC055716.2-201ENST00000552545 DNAH3Q8TD57 4116 aa6.29□□□□□ -1.4
AC055716.2-201ENST00000552545 TRBV24-1A0A075B6N3 115 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms