RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 GNG4P50150 75 aa4.56□□□□□ -1.68
DEPDC4-210ENST00000551642 FAM74A3Q4VXF1 159 aa4.56□□□□□ -1.68
DEPDC4-210ENST00000551642 SMUG1Q53HV7 270 aa4.56□□□□□ -1.68
DEPDC4-210ENST00000551642 CENPWQ5EE01 88 aa4.56□□□□□ -1.68
DEPDC4-210ENST00000551642 PRR9Q5T870 116 aa4.56□□□□□ -1.68
DEPDC4-210ENST00000551642 Q5VSD8 79 aa4.56□□□□□ -1.68
DEPDC4-210ENST00000551642 ZNF705AQ6ZN79 300 aaPredicted RBP4.56□□□□□ -1.68
DEPDC4-210ENST00000551642 BAGE2Q86Y30 109 aa4.56□□□□□ -1.68
DEPDC4-210ENST00000551642 C1orf158Q8N1D5 194 aa4.56□□□□□ -1.68
DEPDC4-210ENST00000551642 LY96Q9Y6Y9 160 aa4.56□□□□□ -1.68
DEPDC4-210ENST00000551642 TRAV12-3A0A0B4J271 114 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 TRAV21A0A0B4J279 112 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 SMIM9A6NGZ8 99 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 FABP5P3A8MUU1 101 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 ZNF727A8MUV8 499 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 H7BYZ3 331 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 GCGP01275 180 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 IGLV2-8P01709 118 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 PFN1P07737 140 aaKnown RBP4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 RNASE4P34096 147 aaKnown RBP4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 ZNF80P51504 273 aaPredicted RBP4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 BTN1A1Q13410 526 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 ZNF674Q2M3X9 581 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 DEFB135Q30KP9 77 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 TDRG1Q3Y452 100 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 COMMD7Q86VX2 200 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 ZC2HC1AQ96GY0 325 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 SMIM7Q9BQ49 75 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 PYGO2Q9BRQ0 406 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 LINC00467Q9BRT7 94 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 NIPSNAP3BQ9BS92 247 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 GOLT1BQ9Y3E0 138 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 NACAE9PAV3 2078 aa4.55□□□□□ -1.68
DEPDC4-210ENST00000551642 J3KRW8 73 aa4.54□□□□□ -1.68
DEPDC4-210ENST00000551642 SFTA3P0C7M3 94 aa4.54□□□□□ -1.68
DEPDC4-210ENST00000551642 CRIP1P50238 77 aa4.54□□□□□ -1.68
DEPDC4-210ENST00000551642 CEBPGP53567 150 aa4.54□□□□□ -1.68
DEPDC4-210ENST00000551642 SOHLH1Q5JUK2 328 aa4.54□□□□□ -1.68
DEPDC4-210ENST00000551642 FAM162BQ5T6X4 162 aa4.54□□□□□ -1.68
DEPDC4-210ENST00000551642 NHLRC2Q8NBF2 726 aa4.54□□□□□ -1.68
DEPDC4-210ENST00000551642 OR11H2Q8NH07 326 aa4.54□□□□□ -1.68
DEPDC4-210ENST00000551642 OCC1Q8TAD7 63 aa4.54□□□□□ -1.68
DEPDC4-210ENST00000551642 TMEM208Q9BTX3 173 aa4.54□□□□□ -1.68
DEPDC4-210ENST00000551642 BIN3Q9NQY0 253 aa4.54□□□□□ -1.68
DEPDC4-210ENST00000551642 IGHV1OR15-1A0A075B7D0 117 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 TMEM218A2RU14 115 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 C19orf71A6NCJ1 209 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 PGPEP1LA6NFU8 196 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 SH2D1AO60880 128 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 MIFP14174 115 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 NDUFA5Q16718 116 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 TMEM241Q24JQ0 296 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 FAM159AQ6UWV7 190 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 Q6ZQT7 251 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 ZNF493Q6ZR52 646 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 LINC01551Q86U37 167 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 Q8NAQ8 132 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 KCNS1Q96KK3 526 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 LINC01587Q99440 93 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 SEC11CQ9BY50 192 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 NAT8Q9UHE5 227 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 TP53TG3Q9ULZ0 132 aa4.53□□□□□ -1.68
DEPDC4-210ENST00000551642 IGHV3OR16-12A0A075B7B8 117 aa4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 KRBOX1C9JBD0 128 aa4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 K7EN84 100 aa4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 CXCL1P09341 107 aa4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 MGST1P10620 155 aaKnown RBP4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 RPL23P62829 140 aaKnown RBP4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 PNRC1Q12796 327 aaPredicted RBP4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 OR5I1Q13606 314 aa4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 RRN3P1Q2M238 152 aa4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 LGALS9BQ3B8N2 356 aa4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 DNLZQ5SXM8 178 aa4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 C10orf91Q5T1B1 145 aa4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 IBA57Q5T440 356 aaKnown RBP4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 PRR27Q6MZM9 219 aa4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 Q6ZR54 194 aa4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 FAM231DQ6ZW35 169 aa4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 RNASE8Q8TDE3 154 aaKnown RBP4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 TMEM263Q8WUH6 116 aaKnown RBP4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 C16orf74Q96GX8 76 aa4.52□□□□□ -1.69
DEPDC4-210ENST00000551642 IGKV3D-20A0A0C4DH25 116 aa4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 PLAC8L1A1L4L8 177 aa4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 TMEM189A5PLL7 270 aa4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 ZNF705GA8MUZ8 300 aaPredicted RBP4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 F8W036 122 aa4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 ORM1P02763 201 aa4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 TYMSP04818 313 aa4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 ADCYAP1P18509 176 aa4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 AZU1P20160 251 aa4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 XGP55808 180 aa4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 MUC21Q5SSG8 566 aa4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 C11orf72Q8NBR9 251 aa4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 ISOC2Q96AB3 205 aa4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 C11orf68Q9H3H3 251 aaKnown RBP4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 OSTCQ9NRP0 149 aa4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 NAGKQ9UJ70 344 aa4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 CARHSP1Q9Y2V2 147 aaKnown RBP4.51□□□□□ -1.69
DEPDC4-210ENST00000551642 IGHV3-16A0A0C4DH30 117 aa4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 B4DEV8 164 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms