RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 SLC25A31Q9H0C2 315 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 PRELID1Q9Y255 219 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 MRPS16Q9Y3D3 137 aaKnown RBP3.25□□□□□ -1.89
SCAF11-214ENST00000550893 F5H768 121 aa3.24□□□□□ -1.89
SCAF11-214ENST00000550893 H3BNG1 76 aa3.24□□□□□ -1.89
SCAF11-214ENST00000550893 GNRH2O43555 120 aa3.24□□□□□ -1.89
SCAF11-214ENST00000550893 OR7C2O60412 319 aa3.24□□□□□ -1.89
SCAF11-214ENST00000550893 TCRAP04437 139 aa3.24□□□□□ -1.89
SCAF11-214ENST00000550893 HTN1P15515 57 aa3.24□□□□□ -1.89
SCAF11-214ENST00000550893 GCHFRP30047 84 aa3.24□□□□□ -1.89
SCAF11-214ENST00000550893 RNASE4P34096 147 aaKnown RBP3.24□□□□□ -1.89
SCAF11-214ENST00000550893 CRYBA4P53673 196 aa3.24□□□□□ -1.89
SCAF11-214ENST00000550893 KHDC3LQ587J8 217 aa3.24□□□□□ -1.89
SCAF11-214ENST00000550893 GOLT1AQ6ZVE7 132 aa3.24□□□□□ -1.89
SCAF11-214ENST00000550893 COX8CQ7Z4L0 72 aa3.24□□□□□ -1.89
SCAF11-214ENST00000550893 LYPD1Q8N2G4 141 aa3.24□□□□□ -1.89
SCAF11-214ENST00000550893 C15orf53Q8NAA6 179 aa3.24□□□□□ -1.89
SCAF11-214ENST00000550893 C2orf48Q96LS8 159 aa3.24□□□□□ -1.89
SCAF11-214ENST00000550893 TMEM208Q9BTX3 173 aa3.24□□□□□ -1.89
SCAF11-214ENST00000550893 OTORQ9NRC9 128 aa3.24□□□□□ -1.89
SCAF11-214ENST00000550893 TRGV1A0A0A0MS02 117 aa3.23□□□□□ -1.89
SCAF11-214ENST00000550893 IGHV3-53P01767 116 aa3.23□□□□□ -1.89
SCAF11-214ENST00000550893 CDC34P49427 236 aaPredicted RBP3.23□□□□□ -1.89
SCAF11-214ENST00000550893 DEFA1P59665 94 aa3.23□□□□□ -1.89
SCAF11-214ENST00000550893 DEFA3P59666 94 aa3.23□□□□□ -1.89
SCAF11-214ENST00000550893 RAB31Q13636 194 aa3.23□□□□□ -1.89
SCAF11-214ENST00000550893 CFAP161Q6P656 301 aa3.23□□□□□ -1.89
SCAF11-214ENST00000550893 LINC00336Q6ZUF6 198 aa3.23□□□□□ -1.89
SCAF11-214ENST00000550893 Q86TA4 180 aa3.23□□□□□ -1.89
SCAF11-214ENST00000550893 WFDC10BQ8IUB3 73 aa3.23□□□□□ -1.89
SCAF11-214ENST00000550893 ARL6IP6Q8N6S5 226 aa3.23□□□□□ -1.89
SCAF11-214ENST00000550893 ZNF680Q8NEM1 530 aa3.23□□□□□ -1.89
SCAF11-214ENST00000550893 OR10G9Q8NGN4 311 aa3.23□□□□□ -1.89
SCAF11-214ENST00000550893 OR10G7Q8NGN6 311 aa3.23□□□□□ -1.89
SCAF11-214ENST00000550893 OR2T35Q8NGX2 323 aa3.23□□□□□ -1.89
SCAF11-214ENST00000550893 LENEPQ9Y5L5 61 aa3.23□□□□□ -1.89
SCAF11-214ENST00000550893 HMCN2Q8NDA2 5059 aa3.23□□□□□ -1.89
SCAF11-214ENST00000550893 FLG2Q5D862 2391 aaPredicted RBP3.22□□□□□ -1.89
SCAF11-214ENST00000550893 FXYD6-FXYD2A0A087WZ82 144 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 TRAV34A0A0B4J273 112 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 PGPA6NDG6 321 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 FAM74A7A6NL05 159 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 K7EQD1 137 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 BCL2L11O43521 198 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 GPX1P07203 203 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 DNAH10OSP0CZ25 163 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 FGF8P55075 233 aaPredicted RBP3.22□□□□□ -1.89
SCAF11-214ENST00000550893 LINC00315P59091 139 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 WFDC2Q14508 124 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 TMEM183BQ1AE95 376 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 IQCF2Q8IXL9 164 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 TMEM183AQ8IXX5 376 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 C6orf223Q8N319 242 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 KCNRGQ8N5I3 272 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 C5orf17Q8NAS9 161 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 LRRC20Q8TCA0 184 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 ZC2HC1AQ96GY0 325 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 DNAJC30Q96LL9 226 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 MED28Q9H204 178 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 JPT2Q9H910 190 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 KCNIP2Q9NS61 270 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 RNF24Q9Y225 148 aa3.22□□□□□ -1.89
SCAF11-214ENST00000550893 CTXND1A0A1B0GTU2 59 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 C17orf112F2Z3M2 114 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 RS1O15537 224 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 NXPH4O95158 308 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 IGLV2-8P01709 118 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 RLN2P04090 185 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 PET100P0DJ07 73 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 S100A7P31151 101 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 CCL20P78556 96 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 ZNF345Q14585 488 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 ACOT6Q3I5F7 207 aaPredicted RBP3.21□□□□□ -1.9
SCAF11-214ENST00000550893 ZNF506Q5JVG8 444 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 DNLZQ5SXM8 178 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 TMEM78Q5T7P6 136 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 C1orf134Q5TEV5 83 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 CFAP126Q5VTH2 177 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 LYPD5Q6UWN5 251 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 GNPNAT1Q96EK6 184 aaPredicted RBP3.21□□□□□ -1.9
SCAF11-214ENST00000550893 HYLS1Q96M11 299 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 SAMD10Q9BYL1 202 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 RPH3ALQ9UNE2 315 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 PSG8Q9UQ74 426 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 ARL2-SNX15V9GYD0 113 aa3.21□□□□□ -1.9
SCAF11-214ENST00000550893 TRBV20OR9-2A0A075B6H5 130 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 TRAV4A0A0B4J268 109 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 TRBV6-1A0A0K0K1D8 114 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 A0A1W2PRE2 83 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 LRCOL1A6NCL2 159 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 ARPC5O15511 151 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 GCGP01275 180 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 LTAP01374 205 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 IFNA5P01569 189 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 SERF2P84101 59 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 FLI1Q01543 452 aaPredicted RBP3.2□□□□□ -1.9
SCAF11-214ENST00000550893 OR5I1Q13606 314 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 RGS21Q2M5E4 152 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 HIGD2BQ4VC39 106 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 S100A7AQ86SG5 101 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms