RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ZNF705GA8MUZ8 300 aaPredicted RBP4.09□□□□□ -1.75
SCAF11-213ENST00000550629 SNURFLB1AK76 121 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 F8W036 122 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 PPP1R2P9O14990 202 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 GAGE7O76087 117 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 GAGE12FP0CL80 117 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 GAGE12GP0CL81 117 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 GAGE12IP0CL82 117 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 ASIPP42127 132 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 TCL1AP56279 114 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 RPL23P62829 140 aaKnown RBP4.09□□□□□ -1.75
SCAF11-213ENST00000550629 GAGE1Q13065 139 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 GAGE4Q13068 117 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 OR5I1Q13606 314 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 ADIRFQ15847 76 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 LGALS9BQ3B8N2 356 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 MUC21Q5SSG8 566 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 Q6ZQT7 251 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 C11orf72Q8NBR9 251 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 SFRP2Q96HF1 295 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 GFRA4Q9GZZ7 299 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 RPP21Q9H633 154 aaKnown RBP4.09□□□□□ -1.75
SCAF11-213ENST00000550629 RETNQ9HD89 108 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 IL36BQ9NZH7 164 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 NAGKQ9UJ70 344 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 TIMM8BQ9Y5J9 83 aaPredicted RBP4.09□□□□□ -1.75
SCAF11-213ENST00000550629 U3KQK5 164 aa4.09□□□□□ -1.75
SCAF11-213ENST00000550629 AGRNO00468 2067 aa4.09□□□□□ -1.76
SCAF11-213ENST00000550629 A0A1W2PPQ1 181 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 A8MWL6 223 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 F2Z2F3 143 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 M0R036 132 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 MT-ND4LP03901 98 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 TYMSP04818 313 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 OR5AL1P0C617 328 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 SPART-AS1P0CW21 52 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 HTN1P15515 57 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 ADCYAP1P18509 176 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 AZU1P20160 251 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 WDR73Q6P4I2 378 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 LINC00612Q8N6U2 182 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 OR2D3Q8NGH3 330 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 C9orf85Q96MD7 179 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 C18orf15Q96N68 181 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 RNASE7Q9H1E1 156 aaKnown RBP4.08□□□□□ -1.76
SCAF11-213ENST00000550629 SCRT2Q9NQ03 307 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 GSN-AS1Q9NRJ2 163 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 TGP01266 2768 aa4.08□□□□□ -1.76
SCAF11-213ENST00000550629 A0A0J9YWU9 116 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 M0R2P5 195 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 GNRH2O43555 120 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 SNAI2O43623 268 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 GATCO43716 136 aaKnown RBP4.07□□□□□ -1.76
SCAF11-213ENST00000550629 CIDEAO60543 219 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 SPINK4O60575 86 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 NXPH4O95158 308 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 ARMS2P0C7Q2 107 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 IGLC6P0CF74 106 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 RNASE3P12724 160 aaKnown RBP4.07□□□□□ -1.76
SCAF11-213ENST00000550629 S100A4P26447 101 aaKnown RBP4.07□□□□□ -1.76
SCAF11-213ENST00000550629 CTRLP40313 264 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 FOXA3P55318 350 aaPredicted RBP4.07□□□□□ -1.76
SCAF11-213ENST00000550629 RHEBQ15382 184 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 PAPPA-AS1Q5QFB9 102 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 SERTAD4-AS1Q5TG53 156 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 SVBPQ8N300 66 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 FER1L6-AS1Q8NA97 138 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 OR10G8Q8NGN5 311 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 TSKUQ8WUA8 353 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 RASL10AQ92737 203 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 CNFNQ9BYD5 112 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 EDA2RQ9HAV5 297 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 TMEM242Q9NWH2 141 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 V9GYV3 84 aa4.07□□□□□ -1.76
SCAF11-213ENST00000550629 IGHV4-4A0A075B6R2 117 aa4.06□□□□□ -1.76
SCAF11-213ENST00000550629 A0A087WWC5 75 aa4.06□□□□□ -1.76
SCAF11-213ENST00000550629 TMSB15BA0A087X1C1 80 aa4.06□□□□□ -1.76
SCAF11-213ENST00000550629 SMIM27A0A1W2PRY6 76 aa4.06□□□□□ -1.76
SCAF11-213ENST00000550629 GRIFINA4D1Z8 144 aa4.06□□□□□ -1.76
SCAF11-213ENST00000550629 GAS8-AS1O95177 125 aa4.06□□□□□ -1.76
SCAF11-213ENST00000550629 SNAPINO95295 136 aa4.06□□□□□ -1.76
SCAF11-213ENST00000550629 EMP1P54849 157 aa4.06□□□□□ -1.76
SCAF11-213ENST00000550629 CACNG7P62955 275 aa4.06□□□□□ -1.76
SCAF11-213ENST00000550629 RPL19P84098 196 aaKnown RBP4.06□□□□□ -1.76
SCAF11-213ENST00000550629 ZNF876PQ49A33 203 aa4.06□□□□□ -1.76
SCAF11-213ENST00000550629 FAM222AQ5U5X8 452 aa4.06□□□□□ -1.76
SCAF11-213ENST00000550629 SLC7A5P1Q8MH63 180 aa4.06□□□□□ -1.76
SCAF11-213ENST00000550629 ZFP82Q8N141 532 aa4.06□□□□□ -1.76
SCAF11-213ENST00000550629 C11orf45Q8TAV5 145 aa4.06□□□□□ -1.76
SCAF11-213ENST00000550629 IMMP2LQ96T52 175 aa4.06□□□□□ -1.76
SCAF11-213ENST00000550629 NOP10Q9NPE3 64 aaKnown RBP4.06□□□□□ -1.76
SCAF11-213ENST00000550629 PHLDA3Q9Y5J5 127 aa4.06□□□□□ -1.76
SCAF11-213ENST00000550629 TRGV1A0A0A0MS02 117 aa4.05□□□□□ -1.76
SCAF11-213ENST00000550629 A0A1B0GW15 77 aa4.05□□□□□ -1.76
SCAF11-213ENST00000550629 A8MWV9 139 aa4.05□□□□□ -1.76
SCAF11-213ENST00000550629 H3BVH4 76 aa4.05□□□□□ -1.76
SCAF11-213ENST00000550629 DEFB4AO15263 64 aa4.05□□□□□ -1.76
SCAF11-213ENST00000550629 APOC3P02656 99 aa4.05□□□□□ -1.76
SCAF11-213ENST00000550629 PRM2P04554 102 aa4.05□□□□□ -1.76
SCAF11-213ENST00000550629 DAD1P61803 113 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms