RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 C9orf116Q5BN46 136 aaPredicted RBP1.09□□□□□ -2.23
SNRPF-202ENST00000549580 MEIG1Q5JSS6 88 aa1.09□□□□□ -2.23
SNRPF-202ENST00000549580 PLAC4Q8WY50 150 aa1.09□□□□□ -2.23
SNRPF-202ENST00000549580 RPRMQ9NS64 109 aa1.09□□□□□ -2.23
SNRPF-202ENST00000549580 BET1LQ9NYM9 111 aa1.09□□□□□ -2.23
SNRPF-202ENST00000549580 AKAP11Q9UKA4 1901 aa1.09□□□□□ -2.24
SNRPF-202ENST00000549580 DAPK1P53355 1430 aa1.08□□□□□ -2.24
SNRPF-202ENST00000549580 A0A1B0GV90 55 aa1.08□□□□□ -2.24
SNRPF-202ENST00000549580 K7EIL1 84 aa1.08□□□□□ -2.24
SNRPF-202ENST00000549580 FXYD6P3P58550 94 aa1.08□□□□□ -2.24
SNRPF-202ENST00000549580 SPINK13Q1W4C9 94 aa1.08□□□□□ -2.24
SNRPF-202ENST00000549580 SNRNP25Q9BV90 132 aaKnown RBP1.08□□□□□ -2.24
SNRPF-202ENST00000549580 SEC11CQ9BY50 192 aa1.08□□□□□ -2.24
SNRPF-202ENST00000549580 AGPAT4-IT1Q9H0P7 198 aa1.08□□□□□ -2.24
SNRPF-202ENST00000549580 SPAG17Q6Q759 2223 aa1.08□□□□□ -2.24
SNRPF-202ENST00000549580 ROCK2O75116 1388 aaKnown RBP1.08□□□□□ -2.24
SNRPF-202ENST00000549580 ZNF142P52746 1687 aaPredicted RBP1.07□□□□□ -2.24
SNRPF-202ENST00000549580 DLEU1O43261 78 aa1.07□□□□□ -2.24
SNRPF-202ENST00000549580 IFNA17P01571 189 aa1.07□□□□□ -2.24
SNRPF-202ENST00000549580 FGF7P21781 194 aa1.07□□□□□ -2.24
SNRPF-202ENST00000549580 CBLN1P23435 193 aa1.07□□□□□ -2.24
SNRPF-202ENST00000549580 SPINT3P49223 89 aa1.07□□□□□ -2.24
SNRPF-202ENST00000549580 NPC2P61916 151 aa1.07□□□□□ -2.24
SNRPF-202ENST00000549580 UBE2G1P62253 170 aa1.07□□□□□ -2.24
SNRPF-202ENST00000549580 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.07□□□□□ -2.24
SNRPF-202ENST00000549580 RERGLQ9H628 205 aa1.07□□□□□ -2.24
SNRPF-202ENST00000549580 TMEM14BQ9NUH8 114 aa1.07□□□□□ -2.24
SNRPF-202ENST00000549580 MYH7P12883 1935 aa1.07□□□□□ -2.24
SNRPF-202ENST00000549580 PHLPP1O60346 1717 aa1.06□□□□□ -2.24
SNRPF-202ENST00000549580 SPEF2Q9C093 1822 aa1.06□□□□□ -2.24
SNRPF-202ENST00000549580 BTG2P78543 158 aa1.06□□□□□ -2.24
SNRPF-202ENST00000549580 NAA60Q9H7X0 242 aa1.06□□□□□ -2.24
SNRPF-202ENST00000549580 FOCADQ5VW36 1801 aa1.05□□□□□ -2.24
SNRPF-202ENST00000549580 CFTRP13569 1480 aa1.05□□□□□ -2.24
SNRPF-202ENST00000549580 MYH9P35579 1960 aaKnown RBP1.05□□□□□ -2.24
SNRPF-202ENST00000549580 AHNAK2Q8IVF2 5795 aa1.05□□□□□ -2.24
SNRPF-202ENST00000549580 PIGBOS1A0A0B4J2F0 54 aa1.05□□□□□ -2.24
SNRPF-202ENST00000549580 RBAKDNA6NC62 111 aa1.05□□□□□ -2.24
SNRPF-202ENST00000549580 SSBP1Q04837 148 aaKnown RBP1.05□□□□□ -2.24
SNRPF-202ENST00000549580 SPINK9Q5DT21 86 aa1.05□□□□□ -2.24
SNRPF-202ENST00000549580 S100A7L2Q5SY68 101 aa1.05□□□□□ -2.24
SNRPF-202ENST00000549580 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
SNRPF-202ENST00000549580 SERP1Q9Y6X1 66 aa1.05□□□□□ -2.24
SNRPF-202ENST00000549580 BCORL1Q5H9F3 1711 aa1.05□□□□□ -2.24
SNRPF-202ENST00000549580 ZNF518AQ6AHZ1 1483 aa1.05□□□□□ -2.24
SNRPF-202ENST00000549580 LAMB1P07942 1786 aa1.04□□□□□ -2.24
SNRPF-202ENST00000549580 CCL3L1P16619 93 aa1.04□□□□□ -2.24
SNRPF-202ENST00000549580 ELOF1P60002 83 aaKnown RBP1.04□□□□□ -2.24
SNRPF-202ENST00000549580 FAM74A4Q5TZK3 123 aa1.04□□□□□ -2.24
SNRPF-202ENST00000549580 C20orf197Q8N268 126 aa1.04□□□□□ -2.24
SNRPF-202ENST00000549580 SPTSSBQ8NFR3 76 aa1.04□□□□□ -2.24
SNRPF-202ENST00000549580 C10orf82Q8WW14 230 aa1.04□□□□□ -2.24
SNRPF-202ENST00000549580 DSCR8Q96T75 97 aa1.04□□□□□ -2.24
SNRPF-202ENST00000549580 LOC100130705A0A1B0GUX0 176 aa1.03□□□□□ -2.24
SNRPF-202ENST00000549580 LY6G6CO95867 125 aa1.03□□□□□ -2.24
SNRPF-202ENST00000549580 AKAIN1P0CW23 69 aa1.03□□□□□ -2.24
SNRPF-202ENST00000549580 Q56UQ5 140 aa1.03□□□□□ -2.24
SNRPF-202ENST00000549580 C12orf73Q69YU5 71 aa1.03□□□□□ -2.24
SNRPF-202ENST00000549580 MBD5Q9P267 1494 aa1.03□□□□□ -2.24
SNRPF-202ENST00000549580 MUC22E2RYF6 1773 aaPredicted RBP1.03□□□□□ -2.24
SNRPF-202ENST00000549580 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
SNRPF-202ENST00000549580 MCRIP1C9JLW8 97 aa1.02□□□□□ -2.25
SNRPF-202ENST00000549580 ZNF137PP52743 207 aa1.02□□□□□ -2.25
SNRPF-202ENST00000549580 RPL37P61927 97 aaKnown RBP1.02□□□□□ -2.25
SNRPF-202ENST00000549580 Q6AWC8 147 aa1.02□□□□□ -2.25
SNRPF-202ENST00000549580 C4orf33Q8N1A6 199 aa1.02□□□□□ -2.25
SNRPF-202ENST00000549580 COX7B2Q8TF08 81 aa1.02□□□□□ -2.25
SNRPF-202ENST00000549580 C2orf88Q9BSF0 95 aa1.02□□□□□ -2.25
SNRPF-202ENST00000549580 WDR7Q9Y4E6 1490 aa1.02□□□□□ -2.25
SNRPF-202ENST00000549580 BCL9LQ86UU0 1499 aa1.01□□□□□ -2.25
SNRPF-202ENST00000549580 SMG6Q86US8 1419 aaKnown RBP1.01□□□□□ -2.25
SNRPF-202ENST00000549580 TRBV10-3A0A0K0K1G6 114 aa1.01□□□□□ -2.25
SNRPF-202ENST00000549580 C6orf52Q5T4I8 152 aa1.01□□□□□ -2.25
SNRPF-202ENST00000549580 PP6455Q8WZ26 134 aa1.01□□□□□ -2.25
SNRPF-202ENST00000549580 LSM10Q969L4 123 aaKnown RBP1.01□□□□□ -2.25
SNRPF-202ENST00000549580 TMEM203Q969S6 136 aa1.01□□□□□ -2.25
SNRPF-202ENST00000549580 NALCNQ8IZF0 1738 aa1.01□□□□□ -2.25
SNRPF-202ENST00000549580 IFT140Q96RY7 1462 aa1□□□□□ -2.25
SNRPF-202ENST00000549580 NCOA3Q9Y6Q9 1424 aa1□□□□□ -2.25
SNRPF-202ENST00000549580 ESPL1Q14674 2120 aa1□□□□□ -2.25
SNRPF-202ENST00000549580 LINC00587B1AMM8 73 aa1□□□□□ -2.25
SNRPF-202ENST00000549580 UBE2D1P51668 147 aa1□□□□□ -2.25
SNRPF-202ENST00000549580 PRB3Q04118 309 aaPredicted RBP1□□□□□ -2.25
SNRPF-202ENST00000549580 ZNF818PQ6ZRF7 136 aa1□□□□□ -2.25
SNRPF-202ENST00000549580 SCN3BQ9NY72 215 aa1□□□□□ -2.25
SNRPF-202ENST00000549580 V9GYV3 84 aa1□□□□□ -2.25
SNRPF-202ENST00000549580 NRXN2Q9P2S2 1712 aa1□□□□□ -2.25
SNRPF-202ENST00000549580 KDM6BO15054 1643 aa1□□□□□ -2.25
SNRPF-202ENST00000549580 ABCA4P78363 2273 aa0.99□□□□□ -2.25
SNRPF-202ENST00000549580 A0A096LNT2 108 aa0.99□□□□□ -2.25
SNRPF-202ENST00000549580 TRBV7-1A0A0A6YYK4 115 aa0.99□□□□□ -2.25
SNRPF-202ENST00000549580 APOC4-APOC2K7ER74 178 aa0.99□□□□□ -2.25
SNRPF-202ENST00000549580 APOC2P02655 101 aa0.99□□□□□ -2.25
SNRPF-202ENST00000549580 CCL8P80075 99 aa0.99□□□□□ -2.25
SNRPF-202ENST00000549580 GNG8Q9UK08 70 aa0.99□□□□□ -2.25
SNRPF-202ENST00000549580 PLXNA1Q9UIW2 1896 aa0.99□□□□□ -2.25
SNRPF-202ENST00000549580 MIF4GDA9UHW6 222 aaKnown RBP0.98□□□□□ -2.25
SNRPF-202ENST00000549580 SNAPC5O75971 98 aa0.98□□□□□ -2.25
SNRPF-202ENST00000549580 IFNGP01579 166 aa0.98□□□□□ -2.25
SNRPF-202ENST00000549580 RBM3P98179 157 aaKnown RBP0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 351.9 ms