RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 GAGE12IP0CL82 117 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 RNASE3P12724 160 aaKnown RBP4.48□□□□□ -1.69
PRKDC-211ENST00000546304 ADIRFQ15847 76 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 LGALS9BQ3B8N2 356 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 DNLZQ5SXM8 178 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 DGAT2L7PQ6IED9 249 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 OR2D3Q8NGH3 330 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 OCC1Q8TAD7 63 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 PHLDA1Q8WV24 401 aaPredicted RBP4.48□□□□□ -1.69
PRKDC-211ENST00000546304 RNASE7Q9H1E1 156 aaKnown RBP4.48□□□□□ -1.69
PRKDC-211ENST00000546304 RPP21Q9H633 154 aaKnown RBP4.48□□□□□ -1.69
PRKDC-211ENST00000546304 IL36BQ9NZH7 164 aa4.48□□□□□ -1.69
PRKDC-211ENST00000546304 HYDINQ4G0P3 5121 aa4.47□□□□□ -1.69
PRKDC-211ENST00000546304 TRGV2A0A075B6R0 118 aa4.47□□□□□ -1.69
PRKDC-211ENST00000546304 TRAV10A0A0B4J240 114 aa4.47□□□□□ -1.69
PRKDC-211ENST00000546304 XKRY2A2RUG3 117 aa4.47□□□□□ -1.69
PRKDC-211ENST00000546304 ARMS2P0C7Q2 107 aa4.47□□□□□ -1.69
PRKDC-211ENST00000546304 GZMBP10144 247 aa4.47□□□□□ -1.69
PRKDC-211ENST00000546304 HTN3P15516 51 aa4.47□□□□□ -1.69
PRKDC-211ENST00000546304 ADCYAP1P18509 176 aa4.47□□□□□ -1.69
PRKDC-211ENST00000546304 CTRLP40313 264 aa4.47□□□□□ -1.69
PRKDC-211ENST00000546304 ERVFC1-1P60608 527 aa4.47□□□□□ -1.69
PRKDC-211ENST00000546304 RPS20P60866 119 aaKnown RBP4.47□□□□□ -1.69
PRKDC-211ENST00000546304 RPL23P62829 140 aaKnown RBP4.47□□□□□ -1.69
PRKDC-211ENST00000546304 TMEM241Q24JQ0 296 aa4.47□□□□□ -1.69
PRKDC-211ENST00000546304 ZFAND6Q6FIF0 208 aa4.47□□□□□ -1.69
PRKDC-211ENST00000546304 FAM231DQ6ZW35 169 aa4.47□□□□□ -1.69
PRKDC-211ENST00000546304 ISOC2Q96AB3 205 aa4.47□□□□□ -1.69
PRKDC-211ENST00000546304 C18orf15Q96N68 181 aa4.47□□□□□ -1.69
PRKDC-211ENST00000546304 NDUFAF3Q9BU61 184 aa4.47□□□□□ -1.69
PRKDC-211ENST00000546304 DEFB131BA0A096LNP1 70 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 GAGE10A6NGK3 116 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 C3orf84H3BNL1 204 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 M0R381 172 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 SNAI2O43623 268 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 GATCO43716 136 aaKnown RBP4.46□□□□□ -1.7
PRKDC-211ENST00000546304 NXPH4O95158 308 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 ATP5G1P05496 136 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 OR5AL1P0C617 328 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 IGLC6P0CF74 106 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 PNRC1Q12796 327 aaPredicted RBP4.46□□□□□ -1.7
PRKDC-211ENST00000546304 ZNF876PQ49A33 203 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 PIK3CD-AS1Q5SR53 167 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 ZFP82Q8N141 532 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 C15orf54Q8N8G6 183 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 FER1L6-AS1Q8NA97 138 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 OR10AG1Q8NH19 301 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 RASL10AQ92737 203 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 SFRP2Q96HF1 295 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 TPPP3Q9BW30 176 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 SCRT2Q9NQ03 307 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 OSTCQ9NRP0 149 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 PHLDA3Q9Y5J5 127 aa4.46□□□□□ -1.7
PRKDC-211ENST00000546304 A0A087WWL8 130 aa4.45□□□□□ -1.7
PRKDC-211ENST00000546304 TRAV4A0A0B4J268 109 aa4.45□□□□□ -1.7
PRKDC-211ENST00000546304 A0A1W2PPQ1 181 aa4.45□□□□□ -1.7
PRKDC-211ENST00000546304 TMEM218A2RU14 115 aa4.45□□□□□ -1.7
PRKDC-211ENST00000546304 F5H768 121 aa4.45□□□□□ -1.7
PRKDC-211ENST00000546304 F8W036 122 aa4.45□□□□□ -1.7
PRKDC-211ENST00000546304 IGHV3-53P01767 116 aa4.45□□□□□ -1.7
PRKDC-211ENST00000546304 CASC10Q5T4H9 136 aa4.45□□□□□ -1.7
PRKDC-211ENST00000546304 SUMO4Q6EEV6 95 aa4.45□□□□□ -1.7
PRKDC-211ENST00000546304 CEMP1Q6PRD7 247 aaPredicted RBP4.45□□□□□ -1.7
PRKDC-211ENST00000546304 PTH2Q96A98 100 aa4.45□□□□□ -1.7
PRKDC-211ENST00000546304 AP1S3Q96PC3 154 aa4.45□□□□□ -1.7
PRKDC-211ENST00000546304 KLK5Q9Y337 293 aaPredicted RBP4.45□□□□□ -1.7
PRKDC-211ENST00000546304 RYR3Q15413 4870 aa4.45□□□□□ -1.7
PRKDC-211ENST00000546304 MUC21A0A0G2JKD1 596 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 MUC21A0A140T8X8 626 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 A4D1N5 150 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 A8MWL6 223 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 A8MWV9 139 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 RHODO00212 210 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 PCP4P48539 62 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 SPANXN1Q5VSR9 72 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 CFAP126Q5VTH2 177 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 TMEM88Q6PEY1 159 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 POM121L12Q8N7R1 296 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 OR4C5Q8NGB2 326 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 OR10G8Q8NGN5 311 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 TSKUQ8WUA8 353 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 GTSF1Q8WW33 167 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 ZNF479Q96JC4 524 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 SEC11CQ9BY50 192 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 CNFNQ9BYD5 112 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 V9GYV3 84 aa4.44□□□□□ -1.7
PRKDC-211ENST00000546304 KMT2AQ03164 3969 aa4.43□□□□□ -1.7
PRKDC-211ENST00000546304 IGHV4-4A0A075B6R2 117 aa4.43□□□□□ -1.7
PRKDC-211ENST00000546304 TRAV26-1A0A087WT03 109 aa4.43□□□□□ -1.7
PRKDC-211ENST00000546304 TRGV4A0A0C4DH28 118 aa4.43□□□□□ -1.7
PRKDC-211ENST00000546304 FAM231BA6NCW3 169 aa4.43□□□□□ -1.7
PRKDC-211ENST00000546304 HIGD1CA8MV81 97 aa4.43□□□□□ -1.7
PRKDC-211ENST00000546304 IGLL5B9A064 214 aa4.43□□□□□ -1.7
PRKDC-211ENST00000546304 F2Z2F3 143 aa4.43□□□□□ -1.7
PRKDC-211ENST00000546304 RS1O15537 224 aa4.43□□□□□ -1.7
PRKDC-211ENST00000546304 CACNG7P62955 275 aa4.43□□□□□ -1.7
PRKDC-211ENST00000546304 RNF212Q495C1 297 aa4.43□□□□□ -1.7
PRKDC-211ENST00000546304 FAM74A4Q5TZK3 123 aa4.43□□□□□ -1.7
PRKDC-211ENST00000546304 LYZL1Q6UWQ5 148 aa4.43□□□□□ -1.7
PRKDC-211ENST00000546304 FAM210BQ96KR6 192 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms