RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 NPYP01303 97 aa14.05□□□□□ -0.16
SKP2-208ENST00000546211 AKR1D1P51857 326 aa14.05□□□□□ -0.16
SKP2-208ENST00000546211 FAM74A4Q5TZK3 123 aa14.05□□□□□ -0.16
SKP2-208ENST00000546211 RNASEKQ6P5S7 137 aaKnown RBP14.05□□□□□ -0.16
SKP2-208ENST00000546211 NIT1Q86X76 327 aa14.05□□□□□ -0.16
SKP2-208ENST00000546211 IL17DQ8TAD2 202 aa14.05□□□□□ -0.16
SKP2-208ENST00000546211 A8MWV9 139 aa14.04□□□□□ -0.16
SKP2-208ENST00000546211 TNFRSF6BO95407 300 aa14.04□□□□□ -0.16
SKP2-208ENST00000546211 POM121L12Q8N7R1 296 aa14.04□□□□□ -0.16
SKP2-208ENST00000546211 TMEM18Q96B42 140 aa14.04□□□□□ -0.16
SKP2-208ENST00000546211 NDUFAF3Q9BU61 184 aa14.04□□□□□ -0.16
SKP2-208ENST00000546211 MRPL16Q9NX20 251 aaKnown RBP14.04□□□□□ -0.16
SKP2-208ENST00000546211 COL6A5A8TX70 2615 aa14.03□□□□□ -0.16
SKP2-208ENST00000546211 IFITM10A6NMD0 228 aa14.03□□□□□ -0.16
SKP2-208ENST00000546211 F5H697 171 aa14.03□□□□□ -0.16
SKP2-208ENST00000546211 GAS8-AS1O95177 125 aa14.03□□□□□ -0.16
SKP2-208ENST00000546211 CRYGDP07320 174 aa14.03□□□□□ -0.16
SKP2-208ENST00000546211 FABP4P15090 132 aa14.03□□□□□ -0.16
SKP2-208ENST00000546211 LINC00315P59091 139 aa14.03□□□□□ -0.16
SKP2-208ENST00000546211 SAMD5Q5TGI4 173 aa14.03□□□□□ -0.16
SKP2-208ENST00000546211 PRSS3P2Q8NHM4 247 aa14.03□□□□□ -0.16
SKP2-208ENST00000546211 HIST1H2BLQ99880 126 aa14.03□□□□□ -0.16
SKP2-208ENST00000546211 SAMD10Q9BYL1 202 aa14.03□□□□□ -0.16
SKP2-208ENST00000546211 MAP1LC3AQ9H492 121 aa14.03□□□□□ -0.16
SKP2-208ENST00000546211 LOC389332A0A1B0GUA5 103 aa14.02□□□□□ -0.16
SKP2-208ENST00000546211 HSBP1O75506 76 aa14.02□□□□□ -0.16
SKP2-208ENST00000546211 LINC00614P0C842 121 aa14.02□□□□□ -0.16
SKP2-208ENST00000546211 GATA1P15976 413 aaPredicted RBP14.02□□□□□ -0.16
SKP2-208ENST00000546211 RASL10AQ92737 203 aa14.02□□□□□ -0.16
SKP2-208ENST00000546211 CHCHD1Q96BP2 118 aaKnown RBP14.02□□□□□ -0.16
SKP2-208ENST00000546211 ZNF56Q15929 161 aa14.01□□□□□ -0.17
SKP2-208ENST00000546211 TRGV1A0A0A0MS02 117 aa14□□□□□ -0.17
SKP2-208ENST00000546211 SMIM9A6NGZ8 99 aa14□□□□□ -0.17
SKP2-208ENST00000546211 PPP1R17O96001 155 aa14□□□□□ -0.17
SKP2-208ENST00000546211 DAZ2Q13117 558 aaKnown RBP14□□□□□ -0.17
SKP2-208ENST00000546211 FA2HQ7L5A8 372 aa14□□□□□ -0.17
SKP2-208ENST00000546211 LURAP1LQ8IV03 231 aa14□□□□□ -0.17
SKP2-208ENST00000546211 NRACQ8N912 160 aa14□□□□□ -0.17
SKP2-208ENST00000546211 URB1-AS1Q96HZ7 61 aa14□□□□□ -0.17
SKP2-208ENST00000546211 A8MZ25 164 aa14□□□□□ -0.17
SKP2-208ENST00000546211 DEFB135Q30KP9 77 aa14□□□□□ -0.17
SKP2-208ENST00000546211 LGALS9BQ3B8N2 356 aa14□□□□□ -0.17
SKP2-208ENST00000546211 SUMO4Q6EEV6 95 aa14□□□□□ -0.17
SKP2-208ENST00000546211 NOP10Q9NPE3 64 aaKnown RBP14□□□□□ -0.17
SKP2-208ENST00000546211 PLAC8L1A1L4L8 177 aa13.99□□□□□ -0.17
SKP2-208ENST00000546211 PMCHP20382 165 aa13.99□□□□□ -0.17
SKP2-208ENST00000546211 IFI27P40305 119 aaPredicted RBP13.99□□□□□ -0.17
SKP2-208ENST00000546211 PACRGQ96M98 296 aaPredicted RBP13.99□□□□□ -0.17
SKP2-208ENST00000546211 RHODO00212 210 aa13.98□□□□□ -0.17
SKP2-208ENST00000546211 AMTP48728 403 aa13.98□□□□□ -0.17
SKP2-208ENST00000546211 CFAP126Q5VTH2 177 aa13.98□□□□□ -0.17
SKP2-208ENST00000546211 AP5S1Q9NUS5 200 aa13.98□□□□□ -0.17
SKP2-208ENST00000546211 X6R8D5 127 aa13.98□□□□□ -0.17
SKP2-208ENST00000546211 RS1O15537 224 aa13.97□□□□□ -0.17
SKP2-208ENST00000546211 OR10D4PQ8NGN7 298 aa13.97□□□□□ -0.17
SKP2-208ENST00000546211 OVOL2Q9BRP0 275 aa13.97□□□□□ -0.17
SKP2-208ENST00000546211 NXT2Q9NPJ8 142 aaKnown RBP13.97□□□□□ -0.17
SKP2-208ENST00000546211 PRSS47A8MTI9 375 aa13.96□□□□□ -0.17
SKP2-208ENST00000546211 Q6ZTI0 123 aa13.96□□□□□ -0.17
SKP2-208ENST00000546211 Q6ZWC4 215 aa13.96□□□□□ -0.17
SKP2-208ENST00000546211 RPL39LQ96EH5 51 aaKnown RBP13.96□□□□□ -0.17
SKP2-208ENST00000546211 C20orf78Q9BR46 151 aa13.96□□□□□ -0.17
SKP2-208ENST00000546211 IGHV3-73A0A0B4J1V6 119 aa13.96□□□□□ -0.18
SKP2-208ENST00000546211 UFSP1Q6NVU6 142 aa13.96□□□□□ -0.18
SKP2-208ENST00000546211 FAM19A2Q8N3H0 131 aa13.96□□□□□ -0.18
SKP2-208ENST00000546211 H7C1H1 209 aa13.95□□□□□ -0.18
SKP2-208ENST00000546211 EMP1P54849 157 aa13.95□□□□□ -0.18
SKP2-208ENST00000546211 SUMO2P61956 95 aaKnown RBP13.95□□□□□ -0.18
SKP2-208ENST00000546211 OR4C5Q8NGB2 326 aa13.95□□□□□ -0.18
SKP2-208ENST00000546211 OR11H2Q8NH07 326 aa13.95□□□□□ -0.18
SKP2-208ENST00000546211 ANK2Q01484 3957 aa13.94□□□□□ -0.18
SKP2-208ENST00000546211 ZFP2Q6ZN57 461 aa13.94□□□□□ -0.18
SKP2-208ENST00000546211 Q8N8P6 123 aa13.94□□□□□ -0.18
SKP2-208ENST00000546211 RNF183Q96D59 192 aa13.94□□□□□ -0.18
SKP2-208ENST00000546211 M0QY20 66 aa13.93□□□□□ -0.18
SKP2-208ENST00000546211 SMIM2Q9BVW6 85 aa13.93□□□□□ -0.18
SKP2-208ENST00000546211 ST20Q9HBF5 79 aa13.93□□□□□ -0.18
SKP2-208ENST00000546211 TRGV2A0A075B6R0 118 aa13.92□□□□□ -0.18
SKP2-208ENST00000546211 TRAV4A0A0B4J268 109 aa13.92□□□□□ -0.18
SKP2-208ENST00000546211 IGHV1-24A0A0C4DH33 117 aa13.92□□□□□ -0.18
SKP2-208ENST00000546211 GAGE12BA1L429 117 aa13.92□□□□□ -0.18
SKP2-208ENST00000546211 GAGE7O76087 117 aa13.92□□□□□ -0.18
SKP2-208ENST00000546211 GAGE12FP0CL80 117 aa13.92□□□□□ -0.18
SKP2-208ENST00000546211 GAGE12GP0CL81 117 aa13.92□□□□□ -0.18
SKP2-208ENST00000546211 GAGE12IP0CL82 117 aa13.92□□□□□ -0.18
SKP2-208ENST00000546211 EDA2RQ9HAV5 297 aa13.92□□□□□ -0.18
SKP2-208ENST00000546211 CMYA5Q8N3K9 4069 aa13.92□□□□□ -0.18
SKP2-208ENST00000546211 MIFP14174 115 aa13.92□□□□□ -0.18
SKP2-208ENST00000546211 RIPPLY3P57055 190 aa13.92□□□□□ -0.18
SKP2-208ENST00000546211 PMCHL1Q16048 86 aa13.92□□□□□ -0.18
SKP2-208ENST00000546211 IGLV2-18A0A075B6J9 118 aa13.91□□□□□ -0.18
SKP2-208ENST00000546211 NIT2Q9NQR4 276 aa13.91□□□□□ -0.18
SKP2-208ENST00000546211 TRBV6-5A0A0K0K1A5 114 aa13.9□□□□□ -0.18
SKP2-208ENST00000546211 LINC01546A6NGU7 62 aa13.9□□□□□ -0.18
SKP2-208ENST00000546211 ZNF479Q96JC4 524 aa13.9□□□□□ -0.18
SKP2-208ENST00000546211 CIDEAO60543 219 aa13.89□□□□□ -0.19
SKP2-208ENST00000546211 IGHV3-53P01767 116 aa13.89□□□□□ -0.19
SKP2-208ENST00000546211 RPL32P62910 135 aaKnown RBP13.89□□□□□ -0.19
SKP2-208ENST00000546211 IGHV4-28A0A0C4DH34 117 aa13.88□□□□□ -0.19
SKP2-208ENST00000546211 TP53TG1Q9Y2A0 90 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms