RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 SCGB2A2Q13296 93 aa12.44□□□□□ -0.42
KDM2B-216ENST00000543025 Q6ZS46 218 aa12.44□□□□□ -0.42
KDM2B-216ENST00000543025 LINC01549A6NIU2 74 aa12.43□□□□□ -0.42
KDM2B-216ENST00000543025 LINC00315P59091 139 aa12.43□□□□□ -0.42
KDM2B-216ENST00000543025 DUSP14O95147 198 aaKnown RBP12.43□□□□□ -0.42
KDM2B-216ENST00000543025 SRD5A1P18405 259 aa12.43□□□□□ -0.42
KDM2B-216ENST00000543025 ID1P41134 155 aa12.43□□□□□ -0.42
KDM2B-216ENST00000543025 RRN3P1Q2M238 152 aa12.43□□□□□ -0.42
KDM2B-216ENST00000543025 AGRNO00468 2067 aa12.42□□□□□ -0.42
KDM2B-216ENST00000543025 IGHV4-30-2A0A087WSY4 118 aa12.42□□□□□ -0.42
KDM2B-216ENST00000543025 NDUFS8O00217 210 aa12.42□□□□□ -0.42
KDM2B-216ENST00000543025 ZNF815PA8K554 130 aa12.42□□□□□ -0.42
KDM2B-216ENST00000543025 K7EMT4 169 aa12.42□□□□□ -0.42
KDM2B-216ENST00000543025 SAMD13Q5VXD3 122 aa12.42□□□□□ -0.42
KDM2B-216ENST00000543025 LRRC75A-AS1Q8N1F1 130 aa12.42□□□□□ -0.42
KDM2B-216ENST00000543025 H3BMG7 143 aa12.41□□□□□ -0.42
KDM2B-216ENST00000543025 CRYGDP07320 174 aa12.41□□□□□ -0.42
KDM2B-216ENST00000543025 DCANP1Q8TF63 244 aa12.41□□□□□ -0.42
KDM2B-216ENST00000543025 TP53TG1Q9Y2A0 90 aa12.41□□□□□ -0.42
KDM2B-216ENST00000543025 POLR2KP53803 58 aaKnown RBP12.41□□□□□ -0.42
KDM2B-216ENST00000543025 CFHR3Q02985 330 aa12.41□□□□□ -0.42
KDM2B-216ENST00000543025 DSCR9P59020 149 aa12.4□□□□□ -0.42
KDM2B-216ENST00000543025 PAPPA-AS1Q5QFB9 102 aa12.4□□□□□ -0.42
KDM2B-216ENST00000543025 SUMO4Q6EEV6 95 aa12.4□□□□□ -0.42
KDM2B-216ENST00000543025 SCGB1D4Q6XE38 83 aa12.4□□□□□ -0.42
KDM2B-216ENST00000543025 ZFP2Q6ZN57 461 aa12.4□□□□□ -0.42
KDM2B-216ENST00000543025 KIR2DL4Q99706 377 aa12.4□□□□□ -0.42
KDM2B-216ENST00000543025 NAV2Q8IVL1 2488 aa12.4□□□□□ -0.42
KDM2B-216ENST00000543025 PDZD2O15018 2839 aa12.4□□□□□ -0.42
KDM2B-216ENST00000543025 MUC4Q99102 2169 aa12.4□□□□□ -0.42
KDM2B-216ENST00000543025 HOXA3O43365 443 aaPredicted RBP12.4□□□□□ -0.42
KDM2B-216ENST00000543025 CD7P09564 240 aa12.4□□□□□ -0.42
KDM2B-216ENST00000543025 EDN2P20800 178 aa12.4□□□□□ -0.42
KDM2B-216ENST00000543025 JPT2Q9H910 190 aa12.4□□□□□ -0.42
KDM2B-216ENST00000543025 TMEM238LA0A1B0GVL6 79 aa12.39□□□□□ -0.43
KDM2B-216ENST00000543025 IGIPA6NJ69 53 aa12.39□□□□□ -0.43
KDM2B-216ENST00000543025 A6NJY4 79 aa12.39□□□□□ -0.43
KDM2B-216ENST00000543025 TSHBP01222 138 aa12.39□□□□□ -0.43
KDM2B-216ENST00000543025 WFDC2Q14508 124 aa12.39□□□□□ -0.43
KDM2B-216ENST00000543025 IGLV4-69A0A075B6H9 119 aa12.39□□□□□ -0.43
KDM2B-216ENST00000543025 VCYO14598 125 aa12.39□□□□□ -0.43
KDM2B-216ENST00000543025 MSMBP08118 114 aa12.39□□□□□ -0.43
KDM2B-216ENST00000543025 AMTNQ6UX39 209 aa12.39□□□□□ -0.43
KDM2B-216ENST00000543025 ITPR2Q14571 2701 aa12.38□□□□□ -0.43
KDM2B-216ENST00000543025 A0A087WWL8 130 aa12.38□□□□□ -0.43
KDM2B-216ENST00000543025 TRAV12-3A0A0B4J271 114 aa12.38□□□□□ -0.43
KDM2B-216ENST00000543025 HERVK_113P61574 105 aa12.38□□□□□ -0.43
KDM2B-216ENST00000543025 PMVKQ15126 192 aa12.38□□□□□ -0.43
KDM2B-216ENST00000543025 Q5PR19 223 aa12.38□□□□□ -0.43
KDM2B-216ENST00000543025 SPANXB1Q9NS25 103 aaPredicted RBP12.38□□□□□ -0.43
KDM2B-216ENST00000543025 C11orf86A6NJI1 115 aa12.38□□□□□ -0.43
KDM2B-216ENST00000543025 F5H697 171 aa12.38□□□□□ -0.43
KDM2B-216ENST00000543025 CD300EQ496F6 205 aaPredicted RBP12.38□□□□□ -0.43
KDM2B-216ENST00000543025 KRTAP1-3Q8IUG1 177 aa12.38□□□□□ -0.43
KDM2B-216ENST00000543025 WFDC12Q8WWY7 111 aa12.38□□□□□ -0.43
KDM2B-216ENST00000543025 TMEM141Q96I45 108 aa12.38□□□□□ -0.43
KDM2B-216ENST00000543025 GAGE13Q4V321 117 aa12.37□□□□□ -0.43
KDM2B-216ENST00000543025 MORN3Q6PF18 240 aaPredicted RBP12.37□□□□□ -0.43
KDM2B-216ENST00000543025 PLEKHB2Q96CS7 222 aa12.37□□□□□ -0.43
KDM2B-216ENST00000543025 TIMM17AQ99595 171 aa12.37□□□□□ -0.43
KDM2B-216ENST00000543025 SDHAF1A6NFY7 115 aa12.37□□□□□ -0.43
KDM2B-216ENST00000543025 J3QR89 54 aa12.37□□□□□ -0.43
KDM2B-216ENST00000543025 SRSF9Q13242 221 aaKnown RBP eCLIP12.37□□□□□ -0.43
KDM2B-216ENST00000543025 PGPEP1Q9NXJ5 209 aa12.36□□□□□ -0.43
KDM2B-216ENST00000543025 LGALS9O00182 355 aa12.36□□□□□ -0.43
KDM2B-216ENST00000543025 RPL39P62891 51 aaKnown RBP12.36□□□□□ -0.43
KDM2B-216ENST00000543025 KLHL30-AS1Q8NEE0 82 aa12.36□□□□□ -0.43
KDM2B-216ENST00000543025 ODF3Q96PU9 254 aa12.36□□□□□ -0.43
KDM2B-216ENST00000543025 MRPL16Q9NX20 251 aaKnown RBP12.36□□□□□ -0.43
KDM2B-216ENST00000543025 ZNF580Q9UK33 172 aa12.36□□□□□ -0.43
KDM2B-216ENST00000543025 TRBV27A0A0K0K1C4 114 aa12.35□□□□□ -0.43
KDM2B-216ENST00000543025 PSMB8P28062 276 aa12.35□□□□□ -0.43
KDM2B-216ENST00000543025 EMP1P54849 157 aa12.35□□□□□ -0.43
KDM2B-216ENST00000543025 DEFB104AQ8WTQ1 72 aa12.35□□□□□ -0.43
KDM2B-216ENST00000543025 A0A096LNT2 108 aa12.35□□□□□ -0.43
KDM2B-216ENST00000543025 TRBV6-5A0A0K0K1A5 114 aa12.35□□□□□ -0.43
KDM2B-216ENST00000543025 TMEM95Q3KNT9 176 aa12.35□□□□□ -0.43
KDM2B-216ENST00000543025 FAM74A4Q5TZK3 123 aa12.35□□□□□ -0.43
KDM2B-216ENST00000543025 C9orf85Q96MD7 179 aa12.35□□□□□ -0.43
KDM2B-216ENST00000543025 UBE2D1P51668 147 aa12.34□□□□□ -0.43
KDM2B-216ENST00000543025 ETDBQ3ZM63 59 aa12.34□□□□□ -0.43
KDM2B-216ENST00000543025 PRO0461Q9UI25 63 aa12.34□□□□□ -0.43
KDM2B-216ENST00000543025 MAP1AP78559 2803 aaPredicted RBP12.34□□□□□ -0.43
KDM2B-216ENST00000543025 IGHV3-16A0A0C4DH30 117 aa12.34□□□□□ -0.43
KDM2B-216ENST00000543025 TMEM238C9JI98 176 aa12.34□□□□□ -0.43
KDM2B-216ENST00000543025 ZNF688P0C7X2 276 aa12.34□□□□□ -0.43
KDM2B-216ENST00000543025 SYT8Q8NBV8 401 aa12.34□□□□□ -0.43
KDM2B-216ENST00000543025 Q96MF0 132 aa12.34□□□□□ -0.43
KDM2B-216ENST00000543025 SH2D6Q7Z4S9 175 aa12.33□□□□□ -0.44
KDM2B-216ENST00000543025 PRRC2AP48634 2157 aaKnown RBP12.33□□□□□ -0.44
KDM2B-216ENST00000543025 CR1P17927 2039 aa12.33□□□□□ -0.44
KDM2B-216ENST00000543025 AVPP01185 164 aa12.33□□□□□ -0.44
KDM2B-216ENST00000543025 SNRPD3P62318 126 aaKnown RBP12.33□□□□□ -0.44
KDM2B-216ENST00000543025 A0A0J9YX75 114 aa12.32□□□□□ -0.44
KDM2B-216ENST00000543025 A0A0J9YY99 117 aa12.32□□□□□ -0.44
KDM2B-216ENST00000543025 B4DSR2 109 aa12.32□□□□□ -0.44
KDM2B-216ENST00000543025 ZNF876PQ49A33 203 aa12.32□□□□□ -0.44
KDM2B-216ENST00000543025 MTURNQ8N3F0 131 aa12.32□□□□□ -0.44
KDM2B-216ENST00000543025 TRAV12-2A0A075B6T6 113 aa12.32□□□□□ -0.44
KDM2B-216ENST00000543025 ZNF56Q15929 161 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms