RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 FGF6P10767 208 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 SULT1A2P50226 295 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 NCS1P62166 190 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 RPL36AP83881 106 aaKnown RBP1.81□□□□□ -2.12
CHD4-209ENST00000542717 ID3Q02535 119 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 RPL18AQ02543 176 aaKnown RBP1.81□□□□□ -2.12
CHD4-209ENST00000542717 FOXI1Q12951 378 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 LGALSLQ3ZCW2 172 aaPredicted RBP1.81□□□□□ -2.12
CHD4-209ENST00000542717 TMEM128Q5BJH2 165 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 C12orf45Q8N5I9 185 aaPredicted RBP1.81□□□□□ -2.12
CHD4-209ENST00000542717 DYNC2LI1Q8TCX1 351 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 SMIM4Q8WVI0 70 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 RPL36ALQ969Q0 106 aaKnown RBP1.81□□□□□ -2.12
CHD4-209ENST00000542717 LINC00526Q96FQ7 95 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 SMIM8Q96KF7 97 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 PFDN5Q99471 154 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 SOSTQ9BQB4 213 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 KRTAP9-8Q9BYQ0 159 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 KRTAP2-2Q9BYT5 123 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 KRTAP2-1Q9BYU5 128 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 MCUBQ9NWR8 336 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 ANAPC11Q9NYG5 84 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 LENEPQ9Y5L5 61 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 FLGP20930 4061 aaPredicted RBP1.8□□□□□ -2.12
CHD4-209ENST00000542717 TRAV21A0A0B4J279 112 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 RBAKDNA6NC62 111 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 A8MWV9 139 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 ZNF861PO60384 105 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 TSC22D2O75157 780 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 SFT2D2O95562 160 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 PYYP10082 97 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 CSN1S1P47710 185 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 RPL29P47914 159 aaKnown RBP1.8□□□□□ -2.12
CHD4-209ENST00000542717 CAMLGP49069 296 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 TAS2R30P59541 319 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 S100A10P60903 97 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 VBP1P61758 197 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 ARL16Q0P5N6 197 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 SYCNQ0VAF6 134 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 PPP1R1AQ13522 171 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 C4orf48Q5BLP8 95 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 ZNF506Q5JVG8 444 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 XP32Q5T750 250 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 FAM74A4Q5TZK3 123 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 MIC13Q5XKP0 118 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 ZFP2Q6ZN57 461 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 NRARPQ7Z6K4 114 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 ASB13Q8WXK3 278 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 PTH2Q96A98 100 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 PARLQ9H300 379 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 Q9H521 79 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 GPN1Q9HCN4 374 aaPredicted RBP1.8□□□□□ -2.12
CHD4-209ENST00000542717 NDUFA12Q9UI09 145 aa1.8□□□□□ -2.12
CHD4-209ENST00000542717 GVQW2A0A096LPI5 108 aaPredicted RBP1.79□□□□□ -2.12
CHD4-209ENST00000542717 PGPEP1LA6NFU8 196 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 ZNF561-AS1K7EIQ3 104 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 RGS5O15539 181 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 NBEAP1P0C6P0 100 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 BCL2P10415 239 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 FAUP35544 74 aaKnown RBP1.79□□□□□ -2.12
CHD4-209ENST00000542717 CAV2P51636 162 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 KRTAP10-10P60014 251 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 UBE2D3P61077 147 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 CTAG1AP78358 180 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 IL18Q14116 193 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 ZFP69Q49AA0 526 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 FAM19A5Q7Z5A7 132 aaPredicted RBP1.79□□□□□ -2.12
CHD4-209ENST00000542717 KRTAP11-1Q8IUC1 163 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 MCFD2Q8NI22 146 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 TMED6Q8WW62 240 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 FXYD5Q96DB9 178 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 SLC25A21Q9BQT8 299 aaPredicted RBP1.79□□□□□ -2.12
CHD4-209ENST00000542717 FUNDC2Q9BWH2 189 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 SLC25A2Q9BXI2 301 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 WFDC1Q9HC57 220 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 VCX3AQ9NNX9 186 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 RABL2AQ9UBK7 228 aaPredicted RBP1.79□□□□□ -2.12
CHD4-209ENST00000542717 WDR83OSQ9Y284 106 aa1.79□□□□□ -2.12
CHD4-209ENST00000542717 TRBV7-3A0A075B6L6 115 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 TRBV25-1A0A075B6N4 114 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 A0A087WXM4 84 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 UBE2L5PA0A1B0GUS4 154 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 C9orf170A2RU37 121 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 C7orf66A4D0T2 115 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 RHODO00212 210 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 CTDSP2O14595 271 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 SCGB1D2O95969 90 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 BCAP31P51572 246 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 RANP62826 216 aaKnown RBP1.78□□□□□ -2.12
CHD4-209ENST00000542717 UBE2D2P62837 147 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 BAXQ07812 192 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 IAH1Q2TAA2 248 aaPredicted RBP1.78□□□□□ -2.12
CHD4-209ENST00000542717 KRTAP13-2Q52LG2 175 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 GCSAMLQ5JQS6 135 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 PIK3CD-AS1Q5SR53 167 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 UFSP1Q6NVU6 142 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 MIR17HGQ75NE6 70 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 ISOC2Q96AB3 205 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 TVP23CQ96ET8 276 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 PHYHIPLQ96FC7 376 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms