RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 PRR15LQ9BU68 103 aa8.25□□□□□ -1.09
GABRB3-204ENST00000541819 UBE2D1P51668 147 aa8.25□□□□□ -1.09
GABRB3-204ENST00000541819 SPTSSBQ8NFR3 76 aa8.25□□□□□ -1.09
GABRB3-204ENST00000541819 RITA1Q96K30 269 aa8.25□□□□□ -1.09
GABRB3-204ENST00000541819 MSRB1Q9NZV6 116 aa8.25□□□□□ -1.09
GABRB3-204ENST00000541819 INTS1Q8N201 2190 aaKnown RBP8.25□□□□□ -1.09
GABRB3-204ENST00000541819 CRYGDP07320 174 aa8.25□□□□□ -1.09
GABRB3-204ENST00000541819 WFDC11Q8NEX6 87 aa8.25□□□□□ -1.09
GABRB3-204ENST00000541819 H3BT86 120 aa8.24□□□□□ -1.09
GABRB3-204ENST00000541819 SPRNQ5BIV9 151 aa8.24□□□□□ -1.09
GABRB3-204ENST00000541819 E9PLD3 99 aa8.24□□□□□ -1.09
GABRB3-204ENST00000541819 IGLV3-1P01715 115 aa8.24□□□□□ -1.09
GABRB3-204ENST00000541819 BRK1Q8WUW1 75 aa8.24□□□□□ -1.09
GABRB3-204ENST00000541819 IGKV2D-26A0A0A0MRZ7 120 aa8.24□□□□□ -1.09
GABRB3-204ENST00000541819 DOCK3Q8IZD9 2030 aa8.24□□□□□ -1.09
GABRB3-204ENST00000541819 DNAJC9-AS1A6NH13 148 aa8.24□□□□□ -1.09
GABRB3-204ENST00000541819 TRBV10-1A0A0K0K1A3 114 aa8.24□□□□□ -1.09
GABRB3-204ENST00000541819 ADORA2A-AS1P86434 159 aa8.24□□□□□ -1.09
GABRB3-204ENST00000541819 RSPO1Q2MKA7 263 aaPredicted RBP8.24□□□□□ -1.09
GABRB3-204ENST00000541819 TRBV6-1A0A0K0K1D8 114 aa8.23□□□□□ -1.09
GABRB3-204ENST00000541819 NFE4Q86UQ8 179 aa8.23□□□□□ -1.09
GABRB3-204ENST00000541819 MAP6D1Q9H9H5 199 aa8.23□□□□□ -1.09
GABRB3-204ENST00000541819 RTTNQ86VV8 2226 aa8.23□□□□□ -1.09
GABRB3-204ENST00000541819 PRAC2D3DTV9 90 aa8.23□□□□□ -1.09
GABRB3-204ENST00000541819 REG3AQ06141 175 aa8.23□□□□□ -1.09
GABRB3-204ENST00000541819 HIGD1BQ9P298 99 aa8.23□□□□□ -1.09
GABRB3-204ENST00000541819 CACNA1IQ9P0X4 2223 aa8.23□□□□□ -1.09
GABRB3-204ENST00000541819 TRAV26-1A0A087WT03 109 aa8.23□□□□□ -1.09
GABRB3-204ENST00000541819 ARFGEF3Q5TH69 2177 aa8.23□□□□□ -1.09
GABRB3-204ENST00000541819 A0A096LNI7 61 aa8.22□□□□□ -1.09
GABRB3-204ENST00000541819 IGFL2Q6UWQ7 119 aa8.22□□□□□ -1.09
GABRB3-204ENST00000541819 C3orf22Q8N5N4 141 aa8.22□□□□□ -1.09
GABRB3-204ENST00000541819 IGF2-ASQ6U949 168 aa8.22□□□□□ -1.09
GABRB3-204ENST00000541819 ZFAND2AQ8N6M9 145 aa8.22□□□□□ -1.09
GABRB3-204ENST00000541819 TET1Q8NFU7 2136 aa8.22□□□□□ -1.09
GABRB3-204ENST00000541819 SPTA1P02549 2419 aa8.21□□□□□ -1.09
GABRB3-204ENST00000541819 LINC00269Q8N2A0 174 aa8.21□□□□□ -1.09
GABRB3-204ENST00000541819 SIRPDQ9H106 197 aa8.21□□□□□ -1.09
GABRB3-204ENST00000541819 LYRM9A8MSI8 78 aa8.21□□□□□ -1.09
GABRB3-204ENST00000541819 IGKV1D-37A0A075B6S9 117 aa8.21□□□□□ -1.1
GABRB3-204ENST00000541819 PATE2Q6UY27 113 aa8.21□□□□□ -1.1
GABRB3-204ENST00000541819 DEFB131BA0A096LNP1 70 aa8.2□□□□□ -1.1
GABRB3-204ENST00000541819 A0A0J9YX75 114 aa8.2□□□□□ -1.1
GABRB3-204ENST00000541819 SBF1O95248 1867 aa8.2□□□□□ -1.1
GABRB3-204ENST00000541819 MIAQ16674 131 aa8.2□□□□□ -1.1
GABRB3-204ENST00000541819 UBE2D4Q9Y2X8 147 aa8.2□□□□□ -1.1
GABRB3-204ENST00000541819 SMIM9A6NGZ8 99 aa8.2□□□□□ -1.1
GABRB3-204ENST00000541819 CTRLP40313 264 aa8.2□□□□□ -1.1
GABRB3-204ENST00000541819 FOXI1Q12951 378 aa8.2□□□□□ -1.1
GABRB3-204ENST00000541819 Q6ZUT4 128 aa8.2□□□□□ -1.1
GABRB3-204ENST00000541819 LINC00173Q6ZV60 143 aa8.2□□□□□ -1.1
GABRB3-204ENST00000541819 FXYD2P54710 66 aa8.2□□□□□ -1.1
GABRB3-204ENST00000541819 A6NDX4 124 aa8.19□□□□□ -1.1
GABRB3-204ENST00000541819 C20orf203Q8NBC4 194 aa8.19□□□□□ -1.1
GABRB3-204ENST00000541819 MDFICQ9P1T7 246 aa8.19□□□□□ -1.1
GABRB3-204ENST00000541819 ZNF706Q9Y5V0 76 aaPredicted RBP8.19□□□□□ -1.1
GABRB3-204ENST00000541819 TRAV23DV6A0A075B6W5 121 aa8.19□□□□□ -1.1
GABRB3-204ENST00000541819 LTBP1Q14766 1721 aa8.19□□□□□ -1.1
GABRB3-204ENST00000541819 COL4A6Q14031 1691 aa8.19□□□□□ -1.1
GABRB3-204ENST00000541819 CHCHD10Q8WYQ3 142 aaPredicted RBP8.19□□□□□ -1.1
GABRB3-204ENST00000541819 FAM19A5Q7Z5A7 132 aaPredicted RBP8.19□□□□□ -1.1
GABRB3-204ENST00000541819 ANK1P16157 1881 aa8.18□□□□□ -1.1
GABRB3-204ENST00000541819 TICRRQ7Z2Z1 1910 aa8.18□□□□□ -1.1
GABRB3-204ENST00000541819 H7C423 109 aa8.18□□□□□ -1.1
GABRB3-204ENST00000541819 WT1P19544 449 aaPredicted RBP8.18□□□□□ -1.1
GABRB3-204ENST00000541819 KIAA1671Q9BY89 1806 aa8.18□□□□□ -1.1
GABRB3-204ENST00000541819 WFDC10BQ8IUB3 73 aa8.18□□□□□ -1.1
GABRB3-204ENST00000541819 LRRC75A-AS1Q8N1F1 130 aa8.18□□□□□ -1.1
GABRB3-204ENST00000541819 LINC00643Q86TS7 51 aa8.18□□□□□ -1.1
GABRB3-204ENST00000541819 Q8N7P7 452 aa8.18□□□□□ -1.1
GABRB3-204ENST00000541819 FAM222AQ5U5X8 452 aa8.17□□□□□ -1.1
GABRB3-204ENST00000541819 LYPD6BQ8NI32 183 aa8.17□□□□□ -1.1
GABRB3-204ENST00000541819 KMT2EQ8IZD2 1858 aa8.17□□□□□ -1.1
GABRB3-204ENST00000541819 HIST2H2BDQ6DRA6 164 aa8.17□□□□□ -1.1
GABRB3-204ENST00000541819 LOXL1Q08397 574 aaPredicted RBP8.17□□□□□ -1.1
GABRB3-204ENST00000541819 WFDC2Q14508 124 aa8.17□□□□□ -1.1
GABRB3-204ENST00000541819 MRPL55Q7Z7F7 128 aaKnown RBP8.17□□□□□ -1.1
GABRB3-204ENST00000541819 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.17□□□□□ -1.1
GABRB3-204ENST00000541819 SERP1Q9Y6X1 66 aa8.17□□□□□ -1.1
GABRB3-204ENST00000541819 TEX49A0A1B0GTD5 131 aa8.16□□□□□ -1.1
GABRB3-204ENST00000541819 ZNF524Q96C55 264 aa8.16□□□□□ -1.1
GABRB3-204ENST00000541819 HEATR1Q9H583 2144 aaKnown RBP8.16□□□□□ -1.1
GABRB3-204ENST00000541819 MPLKIPQ8TAP9 179 aa8.16□□□□□ -1.1
GABRB3-204ENST00000541819 SHISA2Q6UWI4 295 aa8.16□□□□□ -1.1
GABRB3-204ENST00000541819 DEFB1P60022 68 aa8.16□□□□□ -1.1
GABRB3-204ENST00000541819 THSD7BQ9C0I4 1608 aa8.16□□□□□ -1.1
GABRB3-204ENST00000541819 UBE2D3P61077 147 aa8.16□□□□□ -1.1
GABRB3-204ENST00000541819 CEMP1Q6PRD7 247 aaPredicted RBP8.16□□□□□ -1.1
GABRB3-204ENST00000541819 UNQ9165/PRO28630Q6UXU0 137 aa8.16□□□□□ -1.1
GABRB3-204ENST00000541819 FER1L5A0AVI2 2057 aa8.15□□□□□ -1.1
GABRB3-204ENST00000541819 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.15□□□□□ -1.1
GABRB3-204ENST00000541819 KRTAP27-1Q3LI81 207 aa8.15□□□□□ -1.1
GABRB3-204ENST00000541819 Q6ZTI0 123 aa8.15□□□□□ -1.1
GABRB3-204ENST00000541819 ODF3Q96PU9 254 aa8.15□□□□□ -1.11
GABRB3-204ENST00000541819 FAM167A-AS1Q96KT0 104 aa8.14□□□□□ -1.11
GABRB3-204ENST00000541819 PLXNA3P51805 1871 aa8.14□□□□□ -1.11
GABRB3-204ENST00000541819 SDK2Q58EX2 2172 aa8.14□□□□□ -1.11
GABRB3-204ENST00000541819 ODF1Q14990 250 aa8.14□□□□□ -1.11
GABRB3-204ENST00000541819 ATP5EP2Q5VTU8 51 aa8.14□□□□□ -1.11
GABRB3-204ENST00000541819 TTTY13Q9BZ97 58 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms