RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 SBSPONQ8IVN8 264 aa8.46□□□□□ -1.05
CPT1A-206ENST00000540367 TP53TG1Q9Y2A0 90 aa8.46□□□□□ -1.05
CPT1A-206ENST00000540367 IGIPA6NJ69 53 aa8.46□□□□□ -1.06
CPT1A-206ENST00000540367 SOCS3O14543 225 aa8.46□□□□□ -1.06
CPT1A-206ENST00000540367 RNASE3P12724 160 aaKnown RBP8.46□□□□□ -1.06
CPT1A-206ENST00000540367 SAA4P35542 130 aa8.46□□□□□ -1.06
CPT1A-206ENST00000540367 PMVKQ15126 192 aa8.46□□□□□ -1.06
CPT1A-206ENST00000540367 SHISA2Q6UWI4 295 aa8.46□□□□□ -1.06
CPT1A-206ENST00000540367 FAM19A4Q96LR4 140 aa8.46□□□□□ -1.06
CPT1A-206ENST00000540367 USP9XQ93008 2570 aaPredicted RBP8.46□□□□□ -1.06
CPT1A-206ENST00000540367 NXPH4O95158 308 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 IGHV3-30P01768 117 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 IGHV3-30-5P0DP03 117 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 APRG1Q8IVJ8 170 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 IGHV4OR15-8A0A075B7B6 117 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 A0A087WW49 117 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 TMEM262E9PQX1 116 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 GNRH2O43555 120 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 CFC1BP0CG36 223 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 CFC1P0CG37 223 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 RNASE4P34096 147 aaKnown RBP8.45□□□□□ -1.06
CPT1A-206ENST00000540367 EMP1P54849 157 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 TSPEAR-AS2P59090 65 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 Q6ZS46 218 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 C10orf126Q8N4M7 172 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 SLC25A29Q8N8R3 303 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 KIF25-AS1Q9Y6Z4 181 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 MYO18BQ8IUG5 2567 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 NBPF19A0A087WUL8 3843 aa8.45□□□□□ -1.06
CPT1A-206ENST00000540367 FAM223BA6NKX1 122 aa8.44□□□□□ -1.06
CPT1A-206ENST00000540367 A8MWV9 139 aa8.44□□□□□ -1.06
CPT1A-206ENST00000540367 LINC00315P59091 139 aa8.44□□□□□ -1.06
CPT1A-206ENST00000540367 DEFB1P60022 68 aa8.44□□□□□ -1.06
CPT1A-206ENST00000540367 FAM223AQ8IWN6 122 aa8.44□□□□□ -1.06
CPT1A-206ENST00000540367 C5orf56Q8N8D9 126 aa8.44□□□□□ -1.06
CPT1A-206ENST00000540367 TMEM141Q96I45 108 aa8.44□□□□□ -1.06
CPT1A-206ENST00000540367 ARL3P36405 182 aa8.44□□□□□ -1.06
CPT1A-206ENST00000540367 POLR2KP53803 58 aaKnown RBP8.44□□□□□ -1.06
CPT1A-206ENST00000540367 TIMM17AQ99595 171 aa8.44□□□□□ -1.06
CPT1A-206ENST00000540367 ANAPC13Q9BS18 74 aa8.44□□□□□ -1.06
CPT1A-206ENST00000540367 UNQ9165/PRO28630Q6UXU0 137 aa8.43□□□□□ -1.06
CPT1A-206ENST00000540367 ZANQ9Y493 2812 aa8.43□□□□□ -1.06
CPT1A-206ENST00000540367 TRAV41A0A0B4J266 112 aa8.43□□□□□ -1.06
CPT1A-206ENST00000540367 TRBV7-9A0A0J9YWB2 115 aa8.43□□□□□ -1.06
CPT1A-206ENST00000540367 ZNF688P0C7X2 276 aa8.43□□□□□ -1.06
CPT1A-206ENST00000540367 RPL39P62891 51 aaKnown RBP8.43□□□□□ -1.06
CPT1A-206ENST00000540367 C19orf54Q5BKX5 351 aa8.43□□□□□ -1.06
CPT1A-206ENST00000540367 ZFAND6Q6FIF0 208 aa8.43□□□□□ -1.06
CPT1A-206ENST00000540367 AMELXQ99217 191 aa8.43□□□□□ -1.06
CPT1A-206ENST00000540367 PRO1854Q9UHT4 67 aa8.43□□□□□ -1.06
CPT1A-206ENST00000540367 POLQO75417 2590 aa8.43□□□□□ -1.06
CPT1A-206ENST00000540367 NDUFA4O00483 81 aa8.42□□□□□ -1.06
CPT1A-206ENST00000540367 TMEM170BQ5T4T1 132 aa8.42□□□□□ -1.06
CPT1A-206ENST00000540367 TMEM219Q86XT9 240 aa8.42□□□□□ -1.06
CPT1A-206ENST00000540367 ANKRD29Q8N6D5 301 aa8.42□□□□□ -1.06
CPT1A-206ENST00000540367 DEFB104AQ8WTQ1 72 aa8.42□□□□□ -1.06
CPT1A-206ENST00000540367 RNF183Q96D59 192 aa8.42□□□□□ -1.06
CPT1A-206ENST00000540367 KIR2DL4Q99706 377 aa8.42□□□□□ -1.06
CPT1A-206ENST00000540367 MUC4Q99102 2169 aa8.42□□□□□ -1.06
CPT1A-206ENST00000540367 F6UB75 175 aa8.42□□□□□ -1.06
CPT1A-206ENST00000540367 VCYO14598 125 aa8.42□□□□□ -1.06
CPT1A-206ENST00000540367 ZNF876PQ49A33 203 aa8.42□□□□□ -1.06
CPT1A-206ENST00000540367 SUMO4Q6EEV6 95 aa8.42□□□□□ -1.06
CPT1A-206ENST00000540367 ZNRF2Q8NHG8 242 aa8.42□□□□□ -1.06
CPT1A-206ENST00000540367 J3QQQ9 107 aa8.41□□□□□ -1.06
CPT1A-206ENST00000540367 GAGE5Q13069 117 aa8.41□□□□□ -1.06
CPT1A-206ENST00000540367 GAGE6Q13070 117 aa8.41□□□□□ -1.06
CPT1A-206ENST00000540367 NPFFO15130 113 aa8.41□□□□□ -1.06
CPT1A-206ENST00000540367 TGFAP01135 160 aa8.41□□□□□ -1.06
CPT1A-206ENST00000540367 TRBV12-3P01733 135 aa8.41□□□□□ -1.06
CPT1A-206ENST00000540367 SCGB1C2P0DMR2 95 aa8.41□□□□□ -1.06
CPT1A-206ENST00000540367 CRIP2P52943 208 aaPredicted RBP8.41□□□□□ -1.06
CPT1A-206ENST00000540367 KLRB1Q12918 225 aa8.41□□□□□ -1.06
CPT1A-206ENST00000540367 TEX29Q8N6K0 151 aa8.41□□□□□ -1.06
CPT1A-206ENST00000540367 M0QXV9 152 aa8.4□□□□□ -1.06
CPT1A-206ENST00000540367 LGALS3P17931 250 aaKnown RBP8.4□□□□□ -1.06
CPT1A-206ENST00000540367 MOB4Q9Y3A3 225 aa8.4□□□□□ -1.06
CPT1A-206ENST00000540367 TRBV27A0A0K0K1C4 114 aa8.4□□□□□ -1.07
CPT1A-206ENST00000540367 SDHAF1A6NFY7 115 aa8.4□□□□□ -1.07
CPT1A-206ENST00000540367 PF4V1P10720 104 aa8.4□□□□□ -1.07
CPT1A-206ENST00000540367 JPT2Q9H910 190 aa8.4□□□□□ -1.07
CPT1A-206ENST00000540367 FBN2P35556 2912 aa8.39□□□□□ -1.07
CPT1A-206ENST00000540367 IGKV3-7A0A075B6H7 116 aa8.39□□□□□ -1.07
CPT1A-206ENST00000540367 SLC25A20O43772 301 aa8.39□□□□□ -1.07
CPT1A-206ENST00000540367 UBTD1Q9HAC8 227 aa8.39□□□□□ -1.07
CPT1A-206ENST00000540367 ZNF469Q96JG9 3925 aaPredicted RBP8.39□□□□□ -1.07
CPT1A-206ENST00000540367 TRBV6-5A0A0K0K1A5 114 aa8.39□□□□□ -1.07
CPT1A-206ENST00000540367 KLLNB2CW77 178 aa8.39□□□□□ -1.07
CPT1A-206ENST00000540367 C19orf84I3L1E1 186 aa8.39□□□□□ -1.07
CPT1A-206ENST00000540367 RPL11P62913 178 aaKnown RBP8.39□□□□□ -1.07
CPT1A-206ENST00000540367 A0A087WWL8 130 aa8.38□□□□□ -1.07
CPT1A-206ENST00000540367 A4D1N5 150 aa8.38□□□□□ -1.07
CPT1A-206ENST00000540367 LGALS9O00182 355 aa8.38□□□□□ -1.07
CPT1A-206ENST00000540367 IGHV3-33P01772 117 aa8.38□□□□□ -1.07
CPT1A-206ENST00000540367 FAM159AQ6UWV7 190 aa8.38□□□□□ -1.07
CPT1A-206ENST00000540367 A0A0B4J2C4 111 aa8.38□□□□□ -1.07
CPT1A-206ENST00000540367 F5H697 171 aa8.38□□□□□ -1.07
CPT1A-206ENST00000540367 LEPROTO15243 131 aa8.38□□□□□ -1.07
CPT1A-206ENST00000540367 EIF4EBP3O60516 100 aaPredicted RBP8.38□□□□□ -1.07
CPT1A-206ENST00000540367 IGHV1-69P01742 117 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms