RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 F8VRH5 84 aa10.22□□□□□ -0.77
BNIP3-202ENST00000540159 SCGB1D4Q6XE38 83 aa10.22□□□□□ -0.77
BNIP3-202ENST00000540159 USMG5Q96IX5 58 aa10.22□□□□□ -0.77
BNIP3-202ENST00000540159 RNF223E7ERA6 249 aa10.22□□□□□ -0.77
BNIP3-202ENST00000540159 ZNF56Q15929 161 aa10.22□□□□□ -0.77
BNIP3-202ENST00000540159 C18orf65Q6ZTR6 163 aa10.22□□□□□ -0.77
BNIP3-202ENST00000540159 MRAP2Q96G30 205 aa10.22□□□□□ -0.77
BNIP3-202ENST00000540159 BEX4Q9NWD9 120 aaPredicted RBP10.22□□□□□ -0.77
BNIP3-202ENST00000540159 NOTCH2Q04721 2471 aa10.22□□□□□ -0.77
BNIP3-202ENST00000540159 H7C1H1 209 aa10.22□□□□□ -0.77
BNIP3-202ENST00000540159 KHDC1LQ5JSQ8 128 aa10.22□□□□□ -0.77
BNIP3-202ENST00000540159 H3BMG7 143 aa10.21□□□□□ -0.77
BNIP3-202ENST00000540159 SIVA1O15304 175 aa10.21□□□□□ -0.77
BNIP3-202ENST00000540159 SLC25A16P16260 332 aa10.21□□□□□ -0.77
BNIP3-202ENST00000540159 SUMO4Q6EEV6 95 aa10.21□□□□□ -0.77
BNIP3-202ENST00000540159 PLEKHB2Q96CS7 222 aa10.21□□□□□ -0.77
BNIP3-202ENST00000540159 PRADC1Q9BSG0 188 aa10.21□□□□□ -0.77
BNIP3-202ENST00000540159 LINC01546A6NGU7 62 aa10.21□□□□□ -0.78
BNIP3-202ENST00000540159 K7ERU9 68 aa10.21□□□□□ -0.78
BNIP3-202ENST00000540159 IGHV4-4A0A075B6R2 117 aa10.2□□□□□ -0.78
BNIP3-202ENST00000540159 ORMDL2Q53FV1 153 aa10.2□□□□□ -0.78
BNIP3-202ENST00000540159 DCANP1Q8TF63 244 aa10.2□□□□□ -0.78
BNIP3-202ENST00000540159 APCP25054 2843 aa10.2□□□□□ -0.78
BNIP3-202ENST00000540159 ZNF815PA8K554 130 aa10.2□□□□□ -0.78
BNIP3-202ENST00000540159 ITPR3Q14573 2671 aa10.2□□□□□ -0.78
BNIP3-202ENST00000540159 KNCNA6PVL3 124 aa10.2□□□□□ -0.78
BNIP3-202ENST00000540159 KLK9Q2XQG4 91 aa10.2□□□□□ -0.78
BNIP3-202ENST00000540159 TMEM170BQ5T4T1 132 aa10.2□□□□□ -0.78
BNIP3-202ENST00000540159 C11orf44Q8N8P7 122 aa10.2□□□□□ -0.78
BNIP3-202ENST00000540159 TOMM6Q96B49 74 aa10.2□□□□□ -0.78
BNIP3-202ENST00000540159 SDHAF1A6NFY7 115 aa10.19□□□□□ -0.78
BNIP3-202ENST00000540159 B4DSR2 109 aa10.19□□□□□ -0.78
BNIP3-202ENST00000540159 IGLV1-40P01703 118 aa10.19□□□□□ -0.78
BNIP3-202ENST00000540159 HLA-DRB4P13762 266 aa10.19□□□□□ -0.78
BNIP3-202ENST00000540159 PLNP26678 52 aa10.19□□□□□ -0.78
BNIP3-202ENST00000540159 Q8N1Y9 231 aa10.19□□□□□ -0.78
BNIP3-202ENST00000540159 NEXN-AS1Q8NBZ9 246 aa10.19□□□□□ -0.78
BNIP3-202ENST00000540159 HLA-DRB4X5D2U9 266 aa10.19□□□□□ -0.78
BNIP3-202ENST00000540159 FN1P02751 2386 aaKnown RBP10.19□□□□□ -0.78
BNIP3-202ENST00000540159 ZNF479Q96JC4 524 aa10.19□□□□□ -0.78
BNIP3-202ENST00000540159 C11orf86A6NJI1 115 aa10.18□□□□□ -0.78
BNIP3-202ENST00000540159 APOMO95445 188 aa10.18□□□□□ -0.78
BNIP3-202ENST00000540159 P0DMU3 169 aa10.18□□□□□ -0.78
BNIP3-202ENST00000540159 FAM231AP0DMU4 169 aa10.18□□□□□ -0.78
BNIP3-202ENST00000540159 FAM231CP0DMU5 169 aa10.18□□□□□ -0.78
BNIP3-202ENST00000540159 SRSF9Q13242 221 aaKnown RBP eCLIP10.18□□□□□ -0.78
BNIP3-202ENST00000540159 SH2D6Q7Z4S9 175 aa10.18□□□□□ -0.78
BNIP3-202ENST00000540159 LENEPQ9Y5L5 61 aa10.18□□□□□ -0.78
BNIP3-202ENST00000540159 TEX48A0A1B0GUV7 120 aa10.18□□□□□ -0.78
BNIP3-202ENST00000540159 WFDC2Q14508 124 aa10.18□□□□□ -0.78
BNIP3-202ENST00000540159 C12orf74Q32Q52 190 aa10.18□□□□□ -0.78
BNIP3-202ENST00000540159 RNASE13Q5GAN3 156 aaKnown RBP10.18□□□□□ -0.78
BNIP3-202ENST00000540159 IGHV4OR15-8A0A075B7B6 117 aa10.18□□□□□ -0.78
BNIP3-202ENST00000540159 A0A087WW49 117 aa10.18□□□□□ -0.78
BNIP3-202ENST00000540159 TSHBP01222 138 aa10.18□□□□□ -0.78
BNIP3-202ENST00000540159 PROK1P58294 105 aa10.18□□□□□ -0.78
BNIP3-202ENST00000540159 MYMXA0A1B0GTQ4 84 aa10.17□□□□□ -0.78
BNIP3-202ENST00000540159 ID1P41134 155 aa10.17□□□□□ -0.78
BNIP3-202ENST00000540159 LINC00315P59091 139 aa10.17□□□□□ -0.78
BNIP3-202ENST00000540159 LGALS1P09382 135 aaKnown RBP10.17□□□□□ -0.78
BNIP3-202ENST00000540159 CRIP2P52943 208 aaPredicted RBP10.17□□□□□ -0.78
BNIP3-202ENST00000540159 PHLDA1Q8WV24 401 aaPredicted RBP10.17□□□□□ -0.78
BNIP3-202ENST00000540159 IGLL5B9A064 214 aa10.16□□□□□ -0.78
BNIP3-202ENST00000540159 CRYGDP07320 174 aa10.16□□□□□ -0.78
BNIP3-202ENST00000540159 PSMB8P28062 276 aa10.16□□□□□ -0.78
BNIP3-202ENST00000540159 ZFP2Q6ZN57 461 aa10.16□□□□□ -0.78
BNIP3-202ENST00000540159 Q9UF83 564 aa10.16□□□□□ -0.78
BNIP3-202ENST00000540159 FAM19A4Q96LR4 140 aa10.16□□□□□ -0.78
BNIP3-202ENST00000540159 KLLNB2CW77 178 aa10.15□□□□□ -0.78
BNIP3-202ENST00000540159 SLURP1P55000 103 aa10.15□□□□□ -0.78
BNIP3-202ENST00000540159 KRTAP10-9P60411 292 aa10.15□□□□□ -0.78
BNIP3-202ENST00000540159 C20orf78Q9BR46 151 aa10.15□□□□□ -0.78
BNIP3-202ENST00000540159 HIGD1BQ9P298 99 aa10.15□□□□□ -0.78
BNIP3-202ENST00000540159 ETDBQ3ZM63 59 aa10.15□□□□□ -0.78
BNIP3-202ENST00000540159 ZNF876PQ49A33 203 aa10.15□□□□□ -0.78
BNIP3-202ENST00000540159 KIR2DL4Q99706 377 aa10.15□□□□□ -0.78
BNIP3-202ENST00000540159 KIF25-AS1Q9Y6Z4 181 aa10.15□□□□□ -0.78
BNIP3-202ENST00000540159 LOC107984156A0A0G2JMH3 177 aa10.15□□□□□ -0.79
BNIP3-202ENST00000540159 CEMP1Q6PRD7 247 aaPredicted RBP10.15□□□□□ -0.79
BNIP3-202ENST00000540159 ARL17AQ8IVW1 177 aa10.15□□□□□ -0.79
BNIP3-202ENST00000540159 HOXD3P31249 432 aaPredicted RBP10.14□□□□□ -0.79
BNIP3-202ENST00000540159 SNRPD3P62318 126 aaKnown RBP10.14□□□□□ -0.79
BNIP3-202ENST00000540159 TM2D2Q9BX73 214 aa10.14□□□□□ -0.79
BNIP3-202ENST00000540159 ZNF580Q9UK33 172 aa10.14□□□□□ -0.79
BNIP3-202ENST00000540159 HOXA3O43365 443 aaPredicted RBP10.14□□□□□ -0.79
BNIP3-202ENST00000540159 TSPEAR-AS2P59090 65 aa10.14□□□□□ -0.79
BNIP3-202ENST00000540159 CFHR3Q02985 330 aa10.14□□□□□ -0.79
BNIP3-202ENST00000540159 PGPEP1Q9NXJ5 209 aa10.14□□□□□ -0.79
BNIP3-202ENST00000540159 PRSS47A8MTI9 375 aa10.13□□□□□ -0.79
BNIP3-202ENST00000540159 ADARB2-AS1A8MUL3 147 aa10.13□□□□□ -0.79
BNIP3-202ENST00000540159 MRPL16Q9NX20 251 aaKnown RBP10.13□□□□□ -0.79
BNIP3-202ENST00000540159 H7C2G1 150 aa10.13□□□□□ -0.79
BNIP3-202ENST00000540159 NDUFS8O00217 210 aa10.13□□□□□ -0.79
BNIP3-202ENST00000540159 SETXQ7Z333 2677 aaKnown RBP10.13□□□□□ -0.79
BNIP3-202ENST00000540159 A0A0J9YX75 114 aa10.13□□□□□ -0.79
BNIP3-202ENST00000540159 LINC01549A6NIU2 74 aa10.13□□□□□ -0.79
BNIP3-202ENST00000540159 TRBV7-3A0A075B6L6 115 aa10.12□□□□□ -0.79
BNIP3-202ENST00000540159 INSL3P51460 131 aa10.12□□□□□ -0.79
BNIP3-202ENST00000540159 DEFB131AP59861 70 aa10.12□□□□□ -0.79
BNIP3-202ENST00000540159 ZNRF2Q8NHG8 242 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms