RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 TMSB15BA0A087X1C1 80 aa14.86□□□□□ -0.03
SCARB1-206ENST00000539320 LRCOL1A6NCL2 159 aa14.86□□□□□ -0.03
SCARB1-206ENST00000539320 UMAD1C9J7I0 102 aa14.86□□□□□ -0.03
SCARB1-206ENST00000539320 PAGE4O60829 102 aa14.86□□□□□ -0.03
SCARB1-206ENST00000539320 TPT1P13693 172 aaKnown RBP14.86□□□□□ -0.03
SCARB1-206ENST00000539320 PHLDA3Q9Y5J5 127 aa14.86□□□□□ -0.03
SCARB1-206ENST00000539320 HMSDA8MTL9 139 aa14.85□□□□□ -0.03
SCARB1-206ENST00000539320 GCSHP23434 173 aa14.85□□□□□ -0.03
SCARB1-206ENST00000539320 XGP55808 180 aa14.85□□□□□ -0.03
SCARB1-206ENST00000539320 FAM74A4Q5TZK3 123 aa14.85□□□□□ -0.03
SCARB1-206ENST00000539320 NTN5Q8WTR8 489 aaPredicted RBP14.85□□□□□ -0.03
SCARB1-206ENST00000539320 SFT2D1Q8WV19 159 aa14.85□□□□□ -0.03
SCARB1-206ENST00000539320 MBD3L1Q8WWY6 194 aa14.85□□□□□ -0.03
SCARB1-206ENST00000539320 ZNF471Q9BX82 626 aaPredicted RBP14.85□□□□□ -0.03
SCARB1-206ENST00000539320 A0A1B0GV50 99 aa14.84□□□□□ -0.03
SCARB1-206ENST00000539320 BCL2L11O43521 198 aa14.84□□□□□ -0.03
SCARB1-206ENST00000539320 ZFP82Q8N141 532 aa14.84□□□□□ -0.03
SCARB1-206ENST00000539320 Q8N3U1 123 aa14.84□□□□□ -0.03
SCARB1-206ENST00000539320 Q9UF83 564 aa14.84□□□□□ -0.03
SCARB1-206ENST00000539320 A0A087WWC5 75 aa14.83□□□□□ -0.04
SCARB1-206ENST00000539320 IGLV5-52A0A0A0MRZ9 124 aa14.83□□□□□ -0.04
SCARB1-206ENST00000539320 A0A0D9SG52 128 aa14.83□□□□□ -0.04
SCARB1-206ENST00000539320 KANTRA0A1W2PQU2 76 aa14.83□□□□□ -0.04
SCARB1-206ENST00000539320 EPM2AB3EWF7 344 aa14.83□□□□□ -0.04
SCARB1-206ENST00000539320 M0R381 172 aa14.83□□□□□ -0.04
SCARB1-206ENST00000539320 SFRP2Q96HF1 295 aa14.83□□□□□ -0.04
SCARB1-206ENST00000539320 A0A087WWL8 130 aa14.82□□□□□ -0.04
SCARB1-206ENST00000539320 SCO2A0A1W2PP80 73 aa14.82□□□□□ -0.04
SCARB1-206ENST00000539320 S100A9P06702 114 aaKnown RBP14.81□□□□□ -0.04
SCARB1-206ENST00000539320 C9orf62Q8N4C0 152 aa14.81□□□□□ -0.04
SCARB1-206ENST00000539320 Q8N814 137 aa14.81□□□□□ -0.04
SCARB1-206ENST00000539320 TM2D2Q9BX73 214 aa14.81□□□□□ -0.04
SCARB1-206ENST00000539320 EIF5AP63241 154 aaKnown RBP14.8□□□□□ -0.04
SCARB1-206ENST00000539320 TOR2AQ5JU69 321 aa14.79□□□□□ -0.04
SCARB1-206ENST00000539320 TMUB2Q71RG4 321 aa14.79□□□□□ -0.04
SCARB1-206ENST00000539320 DNAH8Q96JB1 4490 aa14.78□□□□□ -0.04
SCARB1-206ENST00000539320 TRAV8-3A0A0A6YYJ7 113 aa14.78□□□□□ -0.04
SCARB1-206ENST00000539320 CXCL1P09341 107 aa14.78□□□□□ -0.04
SCARB1-206ENST00000539320 H2AFB1P0C5Y9 115 aa14.78□□□□□ -0.04
SCARB1-206ENST00000539320 DAZ4Q86SG3 579 aaKnown RBP14.78□□□□□ -0.04
SCARB1-206ENST00000539320 DAZ3Q9NR90 486 aaKnown RBP14.78□□□□□ -0.04
SCARB1-206ENST00000539320 TRBV10-1A0A0K0K1A3 114 aa14.77□□□□□ -0.05
SCARB1-206ENST00000539320 RPL19P84098 196 aaKnown RBP14.77□□□□□ -0.05
SCARB1-206ENST00000539320 BAGE2Q86Y30 109 aa14.77□□□□□ -0.05
SCARB1-206ENST00000539320 RPL36AP83881 106 aaKnown RBP14.76□□□□□ -0.05
SCARB1-206ENST00000539320 FRZBQ92765 325 aa14.76□□□□□ -0.05
SCARB1-206ENST00000539320 RPL36ALQ969Q0 106 aaKnown RBP14.76□□□□□ -0.05
SCARB1-206ENST00000539320 MLST8Q9BVC4 326 aa14.76□□□□□ -0.05
SCARB1-206ENST00000539320 WFDC2Q14508 124 aa14.75□□□□□ -0.05
SCARB1-206ENST00000539320 Q5VSD8 79 aa14.75□□□□□ -0.05
SCARB1-206ENST00000539320 NIT1Q86X76 327 aa14.75□□□□□ -0.05
SCARB1-206ENST00000539320 OR10AG1Q8NH19 301 aa14.75□□□□□ -0.05
SCARB1-206ENST00000539320 TMEM70Q9BUB7 260 aa14.75□□□□□ -0.05
SCARB1-206ENST00000539320 URGCP-MRPS24S4R325 110 aa14.75□□□□□ -0.05
SCARB1-206ENST00000539320 UBE2D3P61077 147 aa14.73□□□□□ -0.05
SCARB1-206ENST00000539320 UBE2D2P62837 147 aa14.73□□□□□ -0.05
SCARB1-206ENST00000539320 PRR27Q6MZM9 219 aa14.73□□□□□ -0.05
SCARB1-206ENST00000539320 MANBALQ9NQG1 85 aa14.73□□□□□ -0.05
SCARB1-206ENST00000539320 VPS13BQ7Z7G8 4022 aa14.72□□□□□ -0.05
SCARB1-206ENST00000539320 TRBV7-3A0A075B6L6 115 aa14.72□□□□□ -0.05
SCARB1-206ENST00000539320 SNAI2O43623 268 aa14.72□□□□□ -0.05
SCARB1-206ENST00000539320 HAMPP81172 84 aa14.72□□□□□ -0.05
SCARB1-206ENST00000539320 ZNF56Q15929 161 aa14.72□□□□□ -0.05
SCARB1-206ENST00000539320 OR10G8Q8NGN5 311 aa14.72□□□□□ -0.05
SCARB1-206ENST00000539320 RMI2Q96E14 147 aa14.72□□□□□ -0.05
SCARB1-206ENST00000539320 CHCHD7Q9BUK0 85 aa14.72□□□□□ -0.05
SCARB1-206ENST00000539320 RPL35P42766 123 aaKnown RBP14.71□□□□□ -0.05
SCARB1-206ENST00000539320 RAB4BP61018 213 aa14.71□□□□□ -0.05
SCARB1-206ENST00000539320 C11orf52Q96A22 123 aa14.71□□□□□ -0.05
SCARB1-206ENST00000539320 GNG13Q9P2W3 67 aa14.71□□□□□ -0.05
SCARB1-206ENST00000539320 COX11Q9Y6N1 276 aa14.71□□□□□ -0.05
SCARB1-206ENST00000539320 LECT2O14960 151 aa14.7□□□□□ -0.06
SCARB1-206ENST00000539320 OR5AL1P0C617 328 aa14.7□□□□□ -0.06
SCARB1-206ENST00000539320 SPANXN1Q5VSR9 72 aa14.7□□□□□ -0.06
SCARB1-206ENST00000539320 SSBP4Q9BWG4 385 aaPredicted RBP14.7□□□□□ -0.06
SCARB1-206ENST00000539320 A0A087WX48 190 aa14.69□□□□□ -0.06
SCARB1-206ENST00000539320 SMR3BP02814 79 aaPredicted RBP14.69□□□□□ -0.06
SCARB1-206ENST00000539320 INAFM2P0DMQ5 153 aa14.69□□□□□ -0.06
SCARB1-206ENST00000539320 KCNIP4Q6PIL6 250 aa14.69□□□□□ -0.06
SCARB1-206ENST00000539320 DERL1Q9BUN8 251 aa14.69□□□□□ -0.06
SCARB1-206ENST00000539320 KLK12Q9UKR0 248 aa14.69□□□□□ -0.06
SCARB1-206ENST00000539320 TRAV1-1A0A0B4J248 108 aa14.68□□□□□ -0.06
SCARB1-206ENST00000539320 MUC21A0A0G2JKD1 596 aa14.68□□□□□ -0.06
SCARB1-206ENST00000539320 MUC21A0A140T8X8 626 aa14.68□□□□□ -0.06
SCARB1-206ENST00000539320 RAB5CP51148 216 aa14.68□□□□□ -0.06
SCARB1-206ENST00000539320 CCL20P78556 96 aa14.68□□□□□ -0.06
SCARB1-206ENST00000539320 NEXN-AS1Q8NBZ9 246 aa14.68□□□□□ -0.06
SCARB1-206ENST00000539320 IGKV2D-24A0A075B6R9 120 aa14.67□□□□□ -0.06
SCARB1-206ENST00000539320 ELOBQ15370 118 aa14.67□□□□□ -0.06
SCARB1-206ENST00000539320 EIF5AL1Q6IS14 154 aaKnown RBP14.67□□□□□ -0.06
SCARB1-206ENST00000539320 UBE2WQ96B02 151 aa14.67□□□□□ -0.06
SCARB1-206ENST00000539320 CENPWQ5EE01 88 aa14.66□□□□□ -0.06
SCARB1-206ENST00000539320 SLC51BQ86UW2 128 aa14.66□□□□□ -0.06
SCARB1-206ENST00000539320 BAALCQ8WXS3 180 aa14.66□□□□□ -0.06
SCARB1-206ENST00000539320 DNAJC30Q96LL9 226 aa14.66□□□□□ -0.06
SCARB1-206ENST00000539320 AP1S3Q96PC3 154 aa14.66□□□□□ -0.06
SCARB1-206ENST00000539320 DMBT1Q9UGM3 2413 aaPredicted RBP14.66□□□□□ -0.06
SCARB1-206ENST00000539320 FLG2Q5D862 2391 aaPredicted RBP14.66□□□□□ -0.06
SCARB1-206ENST00000539320 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.65□□□□□ -0.06
SCARB1-206ENST00000539320 TRBV6-8A0A0A6YYG3 113 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms