RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 FAM231AP0DMU4 169 aa12.97□□□□□ -0.33
C2CD3-213ENST00000539061 FAM231CP0DMU5 169 aa12.97□□□□□ -0.33
C2CD3-213ENST00000539061 ABCA4P78363 2273 aa12.96□□□□□ -0.33
C2CD3-213ENST00000539061 B5MCH6 92 aa12.96□□□□□ -0.33
C2CD3-213ENST00000539061 DEFB104AQ8WTQ1 72 aa12.96□□□□□ -0.33
C2CD3-213ENST00000539061 TMEM263Q8WUH6 116 aaKnown RBP12.96□□□□□ -0.33
C2CD3-213ENST00000539061 A0A0B4J2C4 111 aa12.96□□□□□ -0.34
C2CD3-213ENST00000539061 SPTBN4Q9H254 2564 aa12.96□□□□□ -0.34
C2CD3-213ENST00000539061 FAM19A4Q96LR4 140 aa12.95□□□□□ -0.34
C2CD3-213ENST00000539061 DEFB1P60022 68 aa12.95□□□□□ -0.34
C2CD3-213ENST00000539061 APRG1Q8IVJ8 170 aa12.95□□□□□ -0.34
C2CD3-213ENST00000539061 H7C2G1 150 aa12.94□□□□□ -0.34
C2CD3-213ENST00000539061 NDUFV3P56181 108 aaKnown RBP12.94□□□□□ -0.34
C2CD3-213ENST00000539061 SUMO4Q6EEV6 95 aa12.94□□□□□ -0.34
C2CD3-213ENST00000539061 Q8N1Y9 231 aa12.94□□□□□ -0.34
C2CD3-213ENST00000539061 NTN5Q8WTR8 489 aaPredicted RBP12.94□□□□□ -0.34
C2CD3-213ENST00000539061 SOCS3O14543 225 aa12.94□□□□□ -0.34
C2CD3-213ENST00000539061 LEPROTO15243 131 aa12.94□□□□□ -0.34
C2CD3-213ENST00000539061 EIF4EBP3O60516 100 aaPredicted RBP12.94□□□□□ -0.34
C2CD3-213ENST00000539061 ATXN8Q156A1 80 aa12.94□□□□□ -0.34
C2CD3-213ENST00000539061 SIRPDQ9H106 197 aa12.94□□□□□ -0.34
C2CD3-213ENST00000539061 CACNA1BQ00975 2339 aa12.93□□□□□ -0.34
C2CD3-213ENST00000539061 ANKRD11Q6UB99 2663 aaPredicted RBP12.93□□□□□ -0.34
C2CD3-213ENST00000539061 TRAV2A0A0B4J234 112 aa12.93□□□□□ -0.34
C2CD3-213ENST00000539061 SDHAF1A6NFY7 115 aa12.93□□□□□ -0.34
C2CD3-213ENST00000539061 ZFP36P26651 326 aaKnown RBP12.93□□□□□ -0.34
C2CD3-213ENST00000539061 TRAV4A0A0B4J268 109 aa12.93□□□□□ -0.34
C2CD3-213ENST00000539061 PRR30Q53SZ7 412 aaPredicted RBP12.93□□□□□ -0.34
C2CD3-213ENST00000539061 TTC32Q5I0X7 151 aa12.93□□□□□ -0.34
C2CD3-213ENST00000539061 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.92□□□□□ -0.34
C2CD3-213ENST00000539061 TRBV7-9A0A0J9YWB2 115 aa12.92□□□□□ -0.34
C2CD3-213ENST00000539061 F5H697 171 aa12.92□□□□□ -0.34
C2CD3-213ENST00000539061 MUSTN1Q8IVN3 82 aa12.92□□□□□ -0.34
C2CD3-213ENST00000539061 Q1RN00 199 aa12.92□□□□□ -0.34
C2CD3-213ENST00000539061 LINC01620Q4KN68 170 aa12.92□□□□□ -0.34
C2CD3-213ENST00000539061 TRBV27A0A0K0K1C4 114 aa12.91□□□□□ -0.34
C2CD3-213ENST00000539061 TMEM223A0PJW6 202 aa12.91□□□□□ -0.34
C2CD3-213ENST00000539061 GRNP28799 593 aaKnown RBP12.91□□□□□ -0.34
C2CD3-213ENST00000539061 UBE2E1P51965 193 aa12.91□□□□□ -0.34
C2CD3-213ENST00000539061 Q6Q795 121 aa12.91□□□□□ -0.34
C2CD3-213ENST00000539061 JPT2Q9H910 190 aa12.91□□□□□ -0.34
C2CD3-213ENST00000539061 GAGE12JA6NER3 117 aa12.91□□□□□ -0.34
C2CD3-213ENST00000539061 F6UB75 175 aa12.91□□□□□ -0.34
C2CD3-213ENST00000539061 CRLF1O75462 422 aa12.91□□□□□ -0.34
C2CD3-213ENST00000539061 GAGE7O76087 117 aa12.91□□□□□ -0.34
C2CD3-213ENST00000539061 GAGE12FP0CL80 117 aa12.91□□□□□ -0.34
C2CD3-213ENST00000539061 GAGE12GP0CL81 117 aa12.91□□□□□ -0.34
C2CD3-213ENST00000539061 GAGE12IP0CL82 117 aa12.91□□□□□ -0.34
C2CD3-213ENST00000539061 IFITM1P13164 125 aa12.91□□□□□ -0.34
C2CD3-213ENST00000539061 GAGE4Q13068 117 aa12.91□□□□□ -0.34
C2CD3-213ENST00000539061 LINC01600Q96MT4 127 aa12.91□□□□□ -0.34
C2CD3-213ENST00000539061 PIEZO2Q9H5I5 2752 aa12.91□□□□□ -0.34
C2CD3-213ENST00000539061 FAM223BA6NKX1 122 aa12.9□□□□□ -0.34
C2CD3-213ENST00000539061 FAM223AQ8IWN6 122 aa12.9□□□□□ -0.34
C2CD3-213ENST00000539061 A0A087WWL8 130 aa12.9□□□□□ -0.34
C2CD3-213ENST00000539061 RPL11P62913 178 aaKnown RBP12.9□□□□□ -0.34
C2CD3-213ENST00000539061 UNQ9165/PRO28630Q6UXU0 137 aa12.9□□□□□ -0.34
C2CD3-213ENST00000539061 TRAV8-4A0A0B4J246 113 aa12.9□□□□□ -0.35
C2CD3-213ENST00000539061 IGHV1-69P01742 117 aa12.9□□□□□ -0.35
C2CD3-213ENST00000539061 RPL13AP40429 203 aaKnown RBP12.9□□□□□ -0.35
C2CD3-213ENST00000539061 MUC4Q99102 2169 aa12.89□□□□□ -0.35
C2CD3-213ENST00000539061 ANKHD1Q8IWZ3 2542 aaKnown RBP12.89□□□□□ -0.35
C2CD3-213ENST00000539061 TRBV6-5A0A0K0K1A5 114 aa12.89□□□□□ -0.35
C2CD3-213ENST00000539061 SAA4P35542 130 aa12.89□□□□□ -0.35
C2CD3-213ENST00000539061 FAM159AQ6UWV7 190 aa12.89□□□□□ -0.35
C2CD3-213ENST00000539061 IGHV4-39P01824 125 aa12.89□□□□□ -0.35
C2CD3-213ENST00000539061 TRAV41A0A0B4J266 112 aa12.88□□□□□ -0.35
C2CD3-213ENST00000539061 TRBV10-2A0A0K0K1G8 114 aa12.88□□□□□ -0.35
C2CD3-213ENST00000539061 NDUFA4O00483 81 aa12.88□□□□□ -0.35
C2CD3-213ENST00000539061 C5orf56Q8N8D9 126 aa12.88□□□□□ -0.35
C2CD3-213ENST00000539061 LGALS9O00182 355 aa12.88□□□□□ -0.35
C2CD3-213ENST00000539061 ELANEP08246 267 aa12.88□□□□□ -0.35
C2CD3-213ENST00000539061 ZNF256Q9Y2P7 627 aaPredicted RBP12.88□□□□□ -0.35
C2CD3-213ENST00000539061 IGF2RP11717 2491 aa12.88□□□□□ -0.35
C2CD3-213ENST00000539061 TRBV30A0A0K0K1B3 111 aa12.87□□□□□ -0.35
C2CD3-213ENST00000539061 OPRPNQ99935 248 aaPredicted RBP12.87□□□□□ -0.35
C2CD3-213ENST00000539061 BSNQ9UPA5 3926 aa12.87□□□□□ -0.35
C2CD3-213ENST00000539061 A0A0J9YX75 114 aa12.87□□□□□ -0.35
C2CD3-213ENST00000539061 TEX49A0A1B0GTD5 131 aa12.87□□□□□ -0.35
C2CD3-213ENST00000539061 M0R2P5 195 aa12.87□□□□□ -0.35
C2CD3-213ENST00000539061 FBXL19-AS1Q494R0 122 aa12.87□□□□□ -0.35
C2CD3-213ENST00000539061 C11orf71Q6IPW1 123 aa12.87□□□□□ -0.35
C2CD3-213ENST00000539061 ODF3Q96PU9 254 aa12.87□□□□□ -0.35
C2CD3-213ENST00000539061 DCHS2Q6V1P9 2916 aa12.87□□□□□ -0.35
C2CD3-213ENST00000539061 ZNF22P17026 224 aaPredicted RBP12.86□□□□□ -0.35
C2CD3-213ENST00000539061 RHOHQ15669 191 aa12.86□□□□□ -0.35
C2CD3-213ENST00000539061 LRBAP50851 2863 aa12.86□□□□□ -0.35
C2CD3-213ENST00000539061 IGHV3-64A0A075B6Q5 118 aa12.86□□□□□ -0.35
C2CD3-213ENST00000539061 CCDC179H3BU77 68 aa12.86□□□□□ -0.35
C2CD3-213ENST00000539061 NSUN5P1Q3KNT7 163 aa12.86□□□□□ -0.35
C2CD3-213ENST00000539061 C15orf53Q8NAA6 179 aa12.86□□□□□ -0.35
C2CD3-213ENST00000539061 BEX4Q9NWD9 120 aaPredicted RBP12.86□□□□□ -0.35
C2CD3-213ENST00000539061 LINC00527Q9UJ94 153 aa12.86□□□□□ -0.35
C2CD3-213ENST00000539061 KLLNB2CW77 178 aa12.85□□□□□ -0.35
C2CD3-213ENST00000539061 H3BMM0 161 aa12.85□□□□□ -0.35
C2CD3-213ENST00000539061 TRBV12-3P01733 135 aa12.85□□□□□ -0.35
C2CD3-213ENST00000539061 UBE2WQ96B02 151 aa12.85□□□□□ -0.35
C2CD3-213ENST00000539061 IGKV3-7A0A075B6H7 116 aa12.85□□□□□ -0.35
C2CD3-213ENST00000539061 MED13LQ71F56 2210 aa12.85□□□□□ -0.35
C2CD3-213ENST00000539061 FAM74A4Q5TZK3 123 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms