RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 TM2D2Q9BX73 214 aa12.92□□□□□ -0.34
LRP6-202ENST00000535731 LTAP01374 205 aa12.91□□□□□ -0.34
LRP6-202ENST00000535731 TDRG1Q3Y452 100 aa12.91□□□□□ -0.34
LRP6-202ENST00000535731 CEBPGP53567 150 aa12.9□□□□□ -0.34
LRP6-202ENST00000535731 SMUG1Q53HV7 270 aa12.9□□□□□ -0.34
LRP6-202ENST00000535731 Q6ZQT7 251 aa12.9□□□□□ -0.34
LRP6-202ENST00000535731 BAGE2Q86Y30 109 aa12.9□□□□□ -0.34
LRP6-202ENST00000535731 RASL10AQ92737 203 aa12.9□□□□□ -0.34
LRP6-202ENST00000535731 SMDT1Q9H4I9 107 aa12.9□□□□□ -0.34
LRP6-202ENST00000535731 GCGP01275 180 aa12.89□□□□□ -0.35
LRP6-202ENST00000535731 SRP19P09132 144 aaKnown RBP12.89□□□□□ -0.35
LRP6-202ENST00000535731 SRSF3P84103 164 aaKnown RBP12.89□□□□□ -0.35
LRP6-202ENST00000535731 CENPWQ5EE01 88 aa12.89□□□□□ -0.35
LRP6-202ENST00000535731 TMEM183AQ8IXX5 376 aa12.89□□□□□ -0.35
LRP6-202ENST00000535731 TRAV8-6A0A0B4J262 113 aa12.88□□□□□ -0.35
LRP6-202ENST00000535731 RAB19A4D1S5 217 aa12.88□□□□□ -0.35
LRP6-202ENST00000535731 GNG4P50150 75 aa12.88□□□□□ -0.35
LRP6-202ENST00000535731 WFDC2Q14508 124 aa12.88□□□□□ -0.35
LRP6-202ENST00000535731 ZNF674Q2M3X9 581 aa12.88□□□□□ -0.35
LRP6-202ENST00000535731 Q6AWC8 147 aa12.88□□□□□ -0.35
LRP6-202ENST00000535731 NHLRC2Q8NBF2 726 aa12.88□□□□□ -0.35
LRP6-202ENST00000535731 SPXQ9BT56 116 aa12.88□□□□□ -0.35
LRP6-202ENST00000535731 PARLQ9H300 379 aa12.88□□□□□ -0.35
LRP6-202ENST00000535731 TRAV21A0A0B4J279 112 aa12.87□□□□□ -0.35
LRP6-202ENST00000535731 CHAC1Q9BUX1 264 aa12.87□□□□□ -0.35
LRP6-202ENST00000535731 LOC100131303A0A0U1RQF7 123 aa12.86□□□□□ -0.35
LRP6-202ENST00000535731 C9JQL5 133 aa12.86□□□□□ -0.35
LRP6-202ENST00000535731 ZNF80P51504 273 aaPredicted RBP12.86□□□□□ -0.35
LRP6-202ENST00000535731 COX8CQ7Z4L0 72 aa12.86□□□□□ -0.35
LRP6-202ENST00000535731 ZC2HC1AQ96GY0 325 aa12.86□□□□□ -0.35
LRP6-202ENST00000535731 TRBV20OR9-2A0A075B6H5 130 aa12.85□□□□□ -0.35
LRP6-202ENST00000535731 TRAV4A0A0B4J268 109 aa12.85□□□□□ -0.35
LRP6-202ENST00000535731 IGHV3-30P01768 117 aa12.85□□□□□ -0.35
LRP6-202ENST00000535731 IGHV3-33P01772 117 aa12.85□□□□□ -0.35
LRP6-202ENST00000535731 PFN1P07737 140 aaKnown RBP12.85□□□□□ -0.35
LRP6-202ENST00000535731 IGHV3-30-3P0DP02 117 aa12.85□□□□□ -0.35
LRP6-202ENST00000535731 IGHV3-30-5P0DP03 117 aa12.85□□□□□ -0.35
LRP6-202ENST00000535731 OR10J3Q5JRS4 329 aa12.85□□□□□ -0.35
LRP6-202ENST00000535731 SMIM12Q96EX1 92 aa12.85□□□□□ -0.35
LRP6-202ENST00000535731 SMIM7Q9BQ49 75 aa12.85□□□□□ -0.35
LRP6-202ENST00000535731 MLST8Q9BVC4 326 aa12.85□□□□□ -0.35
LRP6-202ENST00000535731 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.84□□□□□ -0.35
LRP6-202ENST00000535731 FABP5P3A8MUU1 101 aa12.84□□□□□ -0.35
LRP6-202ENST00000535731 ZNF727A8MUV8 499 aa12.84□□□□□ -0.35
LRP6-202ENST00000535731 LAGE3Q14657 143 aa12.84□□□□□ -0.35
LRP6-202ENST00000535731 MUC21Q5SSG8 566 aa12.84□□□□□ -0.35
LRP6-202ENST00000535731 FAM162BQ5T6X4 162 aa12.84□□□□□ -0.35
LRP6-202ENST00000535731 OR4C5Q8NGB2 326 aa12.84□□□□□ -0.35
LRP6-202ENST00000535731 NAGKQ9UJ70 344 aa12.84□□□□□ -0.35
LRP6-202ENST00000535731 RS1O15537 224 aa12.83□□□□□ -0.36
LRP6-202ENST00000535731 MGST1P10620 155 aaKnown RBP12.83□□□□□ -0.36
LRP6-202ENST00000535731 LINC01620Q4KN68 170 aa12.83□□□□□ -0.36
LRP6-202ENST00000535731 FAM159AQ6UWV7 190 aa12.83□□□□□ -0.36
LRP6-202ENST00000535731 COMMD7Q86VX2 200 aa12.83□□□□□ -0.36
LRP6-202ENST00000535731 CIRBP-AS1Q8TBR5 109 aa12.83□□□□□ -0.36
LRP6-202ENST00000535731 LINC00862A6NCI5 91 aa12.82□□□□□ -0.36
LRP6-202ENST00000535731 PGPEP1LA6NFU8 196 aa12.82□□□□□ -0.36
LRP6-202ENST00000535731 LECT2O14960 151 aa12.82□□□□□ -0.36
LRP6-202ENST00000535731 SH2D1AO60880 128 aa12.82□□□□□ -0.36
LRP6-202ENST00000535731 IGLV2-8P01709 118 aa12.82□□□□□ -0.36
LRP6-202ENST00000535731 CRIP1P50238 77 aa12.82□□□□□ -0.36
LRP6-202ENST00000535731 FAM74A3Q4VXF1 159 aa12.82□□□□□ -0.36
LRP6-202ENST00000535731 PRR27Q6MZM9 219 aa12.82□□□□□ -0.36
LRP6-202ENST00000535731 UQCC3Q6UW78 93 aa12.81□□□□□ -0.36
LRP6-202ENST00000535731 KCNS1Q96KK3 526 aa12.81□□□□□ -0.36
LRP6-202ENST00000535731 BIN3Q9NQY0 253 aa12.81□□□□□ -0.36
LRP6-202ENST00000535731 GATA1P15976 413 aaPredicted RBP12.8□□□□□ -0.36
LRP6-202ENST00000535731 LELP1Q5T871 98 aa12.8□□□□□ -0.36
LRP6-202ENST00000535731 OCC1Q8TAD7 63 aa12.8□□□□□ -0.36
LRP6-202ENST00000535731 C11orf21Q9P2W6 132 aa12.8□□□□□ -0.36
LRP6-202ENST00000535731 TRGV11A0A075B6L2 103 aa12.79□□□□□ -0.36
LRP6-202ENST00000535731 TRAV8-3A0A0A6YYJ7 113 aa12.79□□□□□ -0.36
LRP6-202ENST00000535731 SDF2L1Q9HCN8 221 aa12.79□□□□□ -0.36
LRP6-202ENST00000535731 TMEM241Q24JQ0 296 aa12.78□□□□□ -0.36
LRP6-202ENST00000535731 DAZAP1Q96EP5 407 aaKnown RBP12.78□□□□□ -0.36
LRP6-202ENST00000535731 IGHV3-16A0A0C4DH30 117 aa12.77□□□□□ -0.37
LRP6-202ENST00000535731 K7EN84 100 aa12.77□□□□□ -0.37
LRP6-202ENST00000535731 M0R036 132 aa12.77□□□□□ -0.37
LRP6-202ENST00000535731 M0R2P5 195 aa12.77□□□□□ -0.37
LRP6-202ENST00000535731 Q8N976 141 aa12.77□□□□□ -0.37
LRP6-202ENST00000535731 BAALCQ8WXS3 180 aa12.77□□□□□ -0.37
LRP6-202ENST00000535731 NAT8Q9UHE5 227 aa12.77□□□□□ -0.37
LRP6-202ENST00000535731 COX11Q9Y6N1 276 aa12.77□□□□□ -0.37
LRP6-202ENST00000535731 IGKV3D-20A0A0C4DH25 116 aa12.76□□□□□ -0.37
LRP6-202ENST00000535731 B4DEV8 164 aa12.76□□□□□ -0.37
LRP6-202ENST00000535731 GNRH2O43555 120 aa12.76□□□□□ -0.37
LRP6-202ENST00000535731 TYMSP04818 313 aa12.76□□□□□ -0.37
LRP6-202ENST00000535731 RPL37AP61513 92 aaKnown RBP12.76□□□□□ -0.37
LRP6-202ENST00000535731 LINC01551Q86U37 167 aa12.76□□□□□ -0.37
LRP6-202ENST00000535731 PRADC1Q9BSG0 188 aa12.76□□□□□ -0.37
LRP6-202ENST00000535731 KRBOX1C9JBD0 128 aa12.75□□□□□ -0.37
LRP6-202ENST00000535731 LINC01559Q495D7 138 aa12.75□□□□□ -0.37
LRP6-202ENST00000535731 SLC25A29Q8N8R3 303 aa12.75□□□□□ -0.37
LRP6-202ENST00000535731 GTSF1LQ9H1H1 148 aa12.75□□□□□ -0.37
LRP6-202ENST00000535731 C19orf71A6NCJ1 209 aa12.74□□□□□ -0.37
LRP6-202ENST00000535731 P01737 135 aa12.74□□□□□ -0.37
LRP6-202ENST00000535731 TMSB15BA0A087X1C1 80 aa12.73□□□□□ -0.37
LRP6-202ENST00000535731 TMEM218A2RU14 115 aa12.73□□□□□ -0.37
LRP6-202ENST00000535731 MT1HL1P0DM35 61 aa12.73□□□□□ -0.37
LRP6-202ENST00000535731 RPL23P62829 140 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms